Gene

KWMTBOMO14047

Pre Gene Modal

BGIBMGA011235

Annotation

PREDICTED:_copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr23(-):16784506-16811902      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.244

CDS

ATGGCGGAGAATTTTAGCGACAATGATCAGGACCTGGTGGCGGTCAGGGTACCGATCAACGGTATGACATGCCAGTCGTGCGTCAGGAGCATCGAAGGATCGGTCAGAGACGTGCCAGGCGTGGAACGCGTTAAGGTGGAGTTATCAGAGAACGCCGGCTACATCAGATATGACCCCCGACTGTGTTCGCTGGAAGCGATCAGGTCTCACATAGAAAATATGGGGTTTGAGGTCCCGGTCGACAATGACGACGAAAGCAGAAATCTCCTGCCGAAGGATGTGCCGACCGCTATTATGATCGACATGACCGGCAGCCAGACGCCGCCCGTCAGCGAAGTCTTCCTCTCAGTGATCGGCATGACCTGCCAATCCTGCGTCAACACCATAGAAGGAGCGTTGAAAGCAAAGTCGGGAGTCACAAAGGGACACGTATCGCTCGCCGATGGAACGGCCCGCGTCGCCTTCCTGCCCAGCACCGTCACGCCCAGGGAGATAGCGGATCTGATATATGAACTGGGCTTCGACGTCAACATCATATCCGTCGACGGACAGGTTTATACGGAAAATAAGTCTCAAATATGTAACAACACAGAGGGATCTGGTGATTGCGCTAAGCAATTGTCTCCGTTCAAGAACAAACTTCAAACGAATGGTTCAGGTCCGCCGGTCGCCGAGGCGGAACTGTCCCGATGTACGCTGGAAGTGCGCGGGATGACCTGCGCCAGTTGTGTCTCTGCGATAGAAAAACATTGCACAAAATTATATGGGGTGCGTTCAGTGCTGATTGCTCTGTTGGCTGCGAAGGCCGAGGTCTGCTACGAGCCCCGTAAGATCTCGGCCTTAGACGTGGCCAATTCCATAACGGAGCTGGGCTTTCCGTCGGAGGTCATCAGCGAGAACGACGGCAGCGGCTTAAAGGAAATACATTTGCTGATAAAGGGAATGACGTGCGCTTCATGTGTCAATAAAATAGAGAAGACGGTACTTAAGCTGACCGGAGTCGAATCCTGCTCCGTGGCCCTGACGACATGCAAGGGCCGCGTCAAATACAACGCAGAACAGATCGGGCCCCGCACGATATGCGACGCGGTCGCCGGGCTCGGGTTCGAGGCGACGGTCGCCAGCCCCCACAACCGGGGGGAAACCAGCTATTTGGAGCACAGAGAGGAGATAAGGAAGTGGCGGAACGCGTTTCTGGTCTCGCTGGTGTTCGGGGCTCCGTGCATGGCCGCCATGGCGTATTTCATGTCCATGATGTCGCACGGCCACAGCGCCAAGGACATGTGCTGCGTGCTGCCCGGACTCAGTTTGGAGAACCTGGTCATGTTCCTGCTGGCGACGCCGGTGCAGTTCATAGGCGGCTGGCATTTCTACAAGCAAGCTTATAAAGCTCTAAAGCACGGCACGACGAACATGGACGTGCTGATAGCAATGACAACCACCATTAGCTACGTATATTCTCTAGGTGTGGTTGTAGCTTCCATGGCGACCCTCCAAGAGGCCAGTCCGGTCACGTTCTTCGACACGCCACCGATGTTGCTGGTCTTCGTATCTCTGGGCAGGTGGCTGGAGCACATAGCCAAGGGTAAAACATCGGAAGCCTTGTCGAAGCTGTTATCGCTGAAGGCAACGGAAGCCGTGCTGGTGACCCTGGACGACAGTGGTAACATTGTAAACGAGAAGTGCATACCGGTTGACCTGGTGGAACGCGGAGACATTCTGAAGGTAGTACCGGGCGCCAAGATACCGGTCGACGGCAAAGTCATATCCGGTCAGACGACGTGCGACGAGTCCCTGATAACCGGGGAATCTATGCCGGTGCCGAAGACGAAAGATTCCCTGGTGATCGGGGGCAGCATGAACTCCAACGGCGCCGTGCTGATGCTGGCGACCCACACCGGGGAAAGTTCGACCCTGGCCCAGATCGTGCGGCTGGTGGAGAGCGCGCAGAGCAGTAAGGCGCCCGTGCAACGACTCGCCGACACCATGGCGGGGTATTTCGTTCCGTTGGTGGTGTTCCTGTCGGTCCTGACGCTGGTCTGCTGGATCATAAGCGGAGCTCTGGACATAAACAGGATAAAGGCCATCACTCCTGAGGTGTACCTGAACGCTGGCTACTCGGACTGGGAGCTGATCGTGCAGTCGGCGTTCCACTTCGCGCTGTCGGTGCTCGCCATCGCGTGCCCGTGCGCGCTGGGGCTGGCCACGCCCACCGCCGTCATGGTGGCCACGGGCGTGGGCGCCAACCTGGGGCTGCTCATCAAGGGCGCGGAGCCGCTCGAGAACGCGCACAAGGTGAAAACTGTGATATTCGACAAGACCGGCACCATAACGCGGGGCTGCACCACCGTCGCCAGGCTGTGCCTCTTCACGGGGGAGCCGGCCGCCCTGCCGGACCTCGTCGCCTGCCTCCTCGCCGCCGAACTCAACTCCGAACACCCTGTAGCTTCAGCTATAGTCCAGTGGTGCAGTGCGGTGCTGAAGGGCGCGAACCCCCTGCAGTGTACCGGCTTCGTGGCCGCCCCTGGATGCGGCCTCAGGGCGAAGCTAAAAGCAACGAACAGCTCCGCCATACACGTGCCGGAGCTAGCCAACATCGTCAACCAGGCCAAGCCGGGGTGCACTTTCGACCTTCACGGCGTCCCCGTCGAGGTGGTGGCGGGCAGTGATGATGCCGCCCTGAGCTCGGCCCAGGCAGCCGCGAGACTACACCGATTGATCAGGACCGAGGATGGAGATGAGTCGGCGGAGCATATAGTCCTGATCGGGAACCGCGAGTGGATGAGTCGCAACGGAGTCAACGTGCCGCGGCCGGTCCAGAAGGCGCTGTCTCAACACGAGGAGCTCGGCTACACGGCCGTGCTGGCCGCCATCGATGATCAGCTGGTCTGCACCATCGGCGTCGCGGACGAAGTAAAGCCCGAAGCCCACCTGGCCGTCTACTGGCTGAAGAAGATGGGCCTCGAGGTGTGCCTGCTGACGGGAGACAACAGGAAGACAGCCGTCGCCATCGCCAGACAGGTCGGCATCAGGAAGGTGTACGCGGAGGTGCTGCCCTCGCACAAGGTCGCTAAAATACAAAAGCTGCAGGAGGAGGGGCAGAGGGTGGCCATGGTCGGTGACGGCGTCAACGATTCTCCAGCCCTGGCGCAGGCCGACGTGGGCATCGCCATCGCCAGCGGCACCGACGTAGCCGTGGAGGCCGCAGACCTGGTGCTCATGAGGAACGATCTTCTGGACGTGGTGGCCTGCTTGAACCTGTCCAGGACCACCGTGAGGAGGGTCAGGCTGAACTTCCTTTTCGCTTCCGTCTACAATCTGCTAGGGATACCGCTGGCGAGTGGAGCCTTCGCTTTATACGGAATGCAGCTGCAGCCCTGGATGGCGTCAGCTGCGATGGCGATGAGCTCAGTGTCCGTGGTCTGCTCAAGCTTGCTGCTCAAAACTTTCAGGAAACCAACGATCGAAGAGTTGAGGACGCCGGAGTACCTCCAGTCGATCCGGCTCGAGGATCTGGACAGCGTGTCCGTGCACCGGGGACTCGACGAGAGAGTGGACCCCAGCGACCGAAGTGTCACCGCTCTATCCAAATTTTTCAACAGAGCCAAAGCCGACGAGGGTTGCCTCCTGCAGGACGACGACGAGCTGGCCGCCGTCTCCTTCATACCGAAACAGCTTTCGCGCGACAGCCCTAGCCTGAACGCCTGA

Protein

MAENFSDNDQDLVAVRVPINGMTCQSCVRSIEGSVRDVPGVERVKVELSENAGYIRYDPRLCSLEAIRSHIENMGFEVPVDNDDESRNLLPKDVPTAIMIDMTGSQTPPVSEVFLSVIGMTCQSCVNTIEGALKAKSGVTKGHVSLADGTARVAFLPSTVTPREIADLIYELGFDVNIISVDGQVYTENKSQICNNTEGSGDCAKQLSPFKNKLQTNGSGPPVAEAELSRCTLEVRGMTCASCVSAIEKHCTKLYGVRSVLIALLAAKAEVCYEPRKISALDVANSITELGFPSEVISENDGSGLKEIHLLIKGMTCASCVNKIEKTVLKLTGVESCSVALTTCKGRVKYNAEQIGPRTICDAVAGLGFEATVASPHNRGETSYLEHREEIRKWRNAFLVSLVFGAPCMAAMAYFMSMMSHGHSAKDMCCVLPGLSLENLVMFLLATPVQFIGGWHFYKQAYKALKHGTTNMDVLIAMTTTISYVYSLGVVVASMATLQEASPVTFFDTPPMLLVFVSLGRWLEHIAKGKTSEALSKLLSLKATEAVLVTLDDSGNIVNEKCIPVDLVERGDILKVVPGAKIPVDGKVISGQTTCDESLITGESMPVPKTKDSLVIGGSMNSNGAVLMLATHTGESSTLAQIVRLVESAQSSKAPVQRLADTMAGYFVPLVVFLSVLTLVCWIISGALDINRIKAITPEVYLNAGYSDWELIVQSAFHFALSVLAIACPCALGLATPTAVMVATGVGANLGLLIKGAEPLENAHKVKTVIFDKTGTITRGCTTVARLCLFTGEPAALPDLVACLLAAELNSEHPVASAIVQWCSAVLKGANPLQCTGFVAAPGCGLRAKLKATNSSAIHVPELANIVNQAKPGCTFDLHGVPVEVVAGSDDAALSSAQAAARLHRLIRTEDGDESAEHIVLIGNREWMSRNGVNVPRPVQKALSQHEELGYTAVLAAIDDQLVCTIGVADEVKPEAHLAVYWLKKMGLEVCLLTGDNRKTAVAIARQVGIRKVYAEVLPSHKVAKIQKLQEEGQRVAMVGDGVNDSPALAQADVGIAIASGTDVAVEAADLVLMRNDLLDVVACLNLSRTTVRRVRLNFLFASVYNLLGIPLASGAFALYGMQLQPWMASAAMAMSSVSVVCSSLLLKTFRKPTIEELRTPEYLQSIRLEDLDSVSVHRGLDERVDPSDRSVTALSKFFNRAKADEGCLLQDDDELAAVSFIPKQLSRDSPSLNA

Similarity

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.

Uniprot

H9JNY1   A0A3S2PID7   A0A212F1I0   A0A194PYV7   A0A088ARU7   A0A154PBY9   + More
A0A2A3EM44   E2A8G0   A0A084WJ40   A0A0L7RDE4   A0A182N3K7   A0A336N3Y4   A0A336L514   A0A336MVP0   A0A1L8DEW1   A0A3L8DH34   A0A182PUK5   A0A1L8DET7   A0A1Q3FBB9   A0A182TEM7   A0A1Q3FDR7   A0A182L4N5   A0A182VAE4   A0A182HH64   A0A182IU19   A0A2M4CQI3   A0A1Q3FAQ5   A0A0J7L6F8   U5EGG8   E2C651   A0A182X6Q9   A0A1S4F4N4   A0A182H1I4   B0XIQ4   A0A182W1R0   A0A2M4A5K6   A0A2J7RI54   A0A2M4A5F9   B0WRZ5   A0A182PZZ9   W5JBD0   A0A2M4CQJ1   A0A182KCF6   A0A151XFI2   A0A182LZK5   A0A158NHF2   Q5TMM2   A0A195AZD5   A0A2M4BAL0   A0A182YL23   A0A2M4B9P2   A0A182RVE5   A0A310SRL6   A0A195D4L2   A0A2M3ZGJ4   A0A182FVU1   A0A195E2A2   Q17FH7   F4WD89   B4JMP4   A0A0L0CKX9   A0A195FWP6   A0A0K8U1J8   B4L6R5   A0A034VY80   B4NPT7   B4M7Q7   A0A0M4ERR1   A0A0C9RBJ3   A0A0N0BF76   B3MXJ1   A0A1B0GB32   B3NU80   A0A1W4WAJ7   A0A067R8T8   T1P9W3   A0A1I8MAC9   A0A0A1XNS8   W8APA1   V5GHJ7   B4Q1I5   Q6IDF6   Q9VYT4   A0A139WGD9   A0A139WG49   A0A1W4WLJ7   A0A1I8P499   B5DLH5   A0A1B6DN17   A0A1B6CFP2   A0A1B6DKB7   A0A1Y1MYS0   E0VL69   U4U8I3   A0A3B0K945   A0A2M4CZI3   A0A182G630   A0A3B0K6Z1   A0A2M4BB03   A0A069DXD5  

Pubmed

19121390    22118469    26354079    20798317    24438588    30249741    + More
20966253    26483478    20920257    23761445    21347285    12364791    25244985    17510324    21719571    17994087    26108605    25348373    24845553    25315136    25830018    24495485    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18362917    19820115    15632085    28004739    20566863    23537049    26334808   

EMBL

BABH01009755    BABH01009756    RSAL01000024    RVE52226.1    AGBW02010873    OWR47592.1    + More
KQ459593    KPI96340.1    KQ434856    KZC08730.1    KZ288222    PBC32111.1    GL437593    EFN70280.1    ATLV01023972    KE525347    KFB50234.1    KQ414614    KOC68858.1    UFQT01002308    SSX33188.1    UFQS01002004    UFQT01002004    SSX12928.1    SSX32370.1    SSX33189.1    GFDF01009106    JAV04978.1    QOIP01000008    RLU19737.1    GFDF01009111    JAV04973.1    GFDL01010198    JAV24847.1    GFDL01009339    JAV25706.1    APCN01002389    GGFL01003418    MBW67596.1    GFDL01010418    JAV24627.1    LBMM01000375    KMQ98953.1    GANO01003447    JAB56424.1    GL452926    EFN76571.1    JXUM01023160    KQ560653    KXJ81426.1    DS233353    EDS29576.1    GGFK01002587    MBW35908.1    NEVH01003505    PNF40517.1    GGFK01002725    MBW36046.1    DS232063    EDS33613.1    AXCN02001106    ADMH02001988    ETN60064.1    GGFL01003409    MBW67587.1    KQ982194    KYQ59095.1    AXCM01000696    ADTU01015732    ADTU01015733    ADTU01015734    AAAB01008986    EAL38875.3    KQ976694    KYM77603.1    GGFJ01000707    MBW49848.1    GGFJ01000633    MBW49774.1    KQ760869    OAD58764.1    KQ976870    KYN07781.1    GGFM01006888    MBW27639.1    KQ979763    KYN19206.1    CH477271    EAT45267.1    GL888086    EGI67816.1    CH916371    EDV91987.1    JRES01000262    KNC32887.1    KQ981208    KYN44851.1    GDHF01032109    JAI20205.1    CH933812    EDW06061.1    GAKP01012449    JAC46503.1    CH964291    EDW86527.2    CH940653    EDW62824.2    CP012528    ALC48865.1    GBYB01013879    GBYB01013880    JAG83646.1    JAG83647.1    KQ435814    KOX72672.1    CH902630    EDV38456.2    CCAG010006530    CCAG010006531    CH954180    EDV45995.2    KK852809    KDR16008.1    KA645556    AFP60185.1    GBXI01001690    JAD12602.1    GAMC01018709    GAMC01018708    JAB87847.1    GALX01004982    JAB63484.1    CM000162    EDX02474.2    BT014649    AAT27273.1    AE014298    AAF48104.3    AGB95309.1    KQ971348    KYB26921.1    KYB26922.1    CH379063    EDY72375.1    GEDC01010266    JAS27032.1    GEDC01025108    GEDC01024633    JAS12190.1    JAS12665.1    GEDC01011164    JAS26134.1    GEZM01017301    GEZM01017300    JAV90789.1    DS235271    EEB14125.1    KB632225    ERL90234.1    OUUW01000038    SPP89873.1    GGFL01006539    MBW70717.1    JXUM01044339    KQ561396    KXJ78716.1    SPP89874.1    GGFJ01001075    MBW50216.1    GBGD01000161    JAC88728.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053268    UP000005203    UP000076502    + More
UP000242457    UP000000311    UP000030765    UP000053825    UP000075884    UP000279307    UP000075885    UP000075902    UP000075882    UP000075903    UP000075840    UP000075880    UP000036403    UP000008237    UP000076407    UP000069940    UP000249989    UP000002320    UP000075920    UP000235965    UP000075886    UP000000673    UP000075881    UP000075809    UP000075883    UP000005205    UP000007062    UP000078540    UP000076408    UP000075900    UP000078542    UP000069272    UP000078492    UP000008820    UP000007755    UP000001070    UP000037069    UP000078541    UP000009192    UP000007798    UP000008792    UP000092553    UP000053105    UP000007801    UP000092444    UP000008711    UP000192221    UP000027135    UP000095301    UP000002282    UP000000803    UP000007266    UP000192223    UP000095300    UP000001819    UP000009046    UP000030742    UP000268350   

PRIDE

H9JNY1    Q6IDF6    Q9VYT4   

Pfam

PF00403   HMA

Interpro

IPR023214   HAD_sf        + More
IPR036163   HMA_dom_sf       
IPR036412   HAD-like_sf       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR017969   Heavy-metal-associated_CS       
IPR001757   P_typ_ATPase       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR006122   HMA_Cu_ion-bd       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR006121   HMA_dom       
IPR018303   ATPase_P-typ_P_site       
IPR027256   P-typ_ATPase_IB       

SUPFAM

SSF81653   SSF81653        + More
SSF56784   SSF56784       
SSF81665   SSF81665       
SSF55008   SSF55008       
SSF81660   SSF81660       

Gene 3D

3.40.1110.10     3.40.50.1000    

CDD

cd00371  HMA

ProteinModelPortal

H9JNY1   A0A3S2PID7   A0A212F1I0   A0A194PYV7   A0A088ARU7   A0A154PBY9   + More
A0A2A3EM44   E2A8G0   A0A084WJ40   A0A0L7RDE4   A0A182N3K7   A0A336N3Y4   A0A336L514   A0A336MVP0   A0A1L8DEW1   A0A3L8DH34   A0A182PUK5   A0A1L8DET7   A0A1Q3FBB9   A0A182TEM7   A0A1Q3FDR7   A0A182L4N5   A0A182VAE4   A0A182HH64   A0A182IU19   A0A2M4CQI3   A0A1Q3FAQ5   A0A0J7L6F8   U5EGG8   E2C651   A0A182X6Q9   A0A1S4F4N4   A0A182H1I4   B0XIQ4   A0A182W1R0   A0A2M4A5K6   A0A2J7RI54   A0A2M4A5F9   B0WRZ5   A0A182PZZ9   W5JBD0   A0A2M4CQJ1   A0A182KCF6   A0A151XFI2   A0A182LZK5   A0A158NHF2   Q5TMM2   A0A195AZD5   A0A2M4BAL0   A0A182YL23   A0A2M4B9P2   A0A182RVE5   A0A310SRL6   A0A195D4L2   A0A2M3ZGJ4   A0A182FVU1   A0A195E2A2   Q17FH7   F4WD89   B4JMP4   A0A0L0CKX9   A0A195FWP6   A0A0K8U1J8   B4L6R5   A0A034VY80   B4NPT7   B4M7Q7   A0A0M4ERR1   A0A0C9RBJ3   A0A0N0BF76   B3MXJ1   A0A1B0GB32   B3NU80   A0A1W4WAJ7   A0A067R8T8   T1P9W3   A0A1I8MAC9   A0A0A1XNS8   W8APA1   V5GHJ7   B4Q1I5   Q6IDF6   Q9VYT4   A0A139WGD9   A0A139WG49   A0A1W4WLJ7   A0A1I8P499   B5DLH5   A0A1B6DN17   A0A1B6CFP2   A0A1B6DKB7   A0A1Y1MYS0   E0VL69   U4U8I3   A0A3B0K945   A0A2M4CZI3   A0A182G630   A0A3B0K6Z1   A0A2M4BB03   A0A069DXD5  

PDB

3J09     E-value=9.56557e-65,     Score=631

KEGG

101738315    K17686 P-type Cu+ transporter [EC:7.2.2.8] | (RefSeq) copper-transporting ATPase 2

GO

GO:0005507   GO:0005524   GO:0030001   GO:0019829   GO:0016021   GO:0046872   GO:0006878   GO:0004008   GO:0060003   GO:0048471   GO:0043682   GO:0005802   GO:0005737   GO:0005375   GO:0048085   GO:0002164   GO:0005886   GO:0055070   GO:0048066   GO:0055065   GO:0005388   GO:0000166   GO:0006812   GO:0004713   GO:0016491   GO:0015930  

Subcellular location

Membrane  

Length:

1235

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

171.81294

Exp number, first 60 AAs:

0.00138

Total prob of N-in:

0.93544

inside

1  -  396

TMhelix

397  -  416

outside

417  -  430

TMhelix

431  -  453

inside

454  -  473

TMhelix

474  -  496

outside

497  -  505

TMhelix

506  -  523

inside

524  -  665

TMhelix

666  -  688

outside

689  -  711

TMhelix

712  -  734

inside

735  -  1098

TMhelix

1099  -  1121

outside

1122  -  1124

TMhelix

1125  -  1147

inside

1148  -  1235

 

 

Pi

218.944214

Theta

158.912566

Tajima's D

1.033064

CLR

0.370702

CSRT

0.670966451677416

Interpretation

Uncertain