Gene

KWMTBOMO14041  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011237

Annotation

26S_proteasome_non-ATPase_regulatory_subunit_13_[Bombyx_mori]

Location

Bomo_Chr23(-):16522999-16528552      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.485

CDS

ATGGCGACTGTTAAGTTTGCAGTTATCGATGTTAGTGATTTTTTAACTAAAAAGCAAGCTAGCGAGCCTGCTTTAGCTGCGGATTGGGCGAAATTAGAGGAACTTTACAATAAAAAACTATGGCACCAACTGACTTTAAAACTGCAAGAATTCGTCAAGAATCCGGCTCTGCAGAGGGGAGACAACCTCATACAGTTGTACAATAACTTTTTGACCACCTTCGAAAGCAAAATAAATCCCCTATCATTAGTTGAGATCATTGCTCATATCGTGGAACAGTATGTCAACAAGAGAGATGCTGTCACATTCCTTGAGAAGGTGGAAACGAAAGTTAAAATGAATGATGAAGCACTGGCTCTTTGTAAGGTGCTACAAGGACAAATATATATTGAACAGCTGAATGATTATGATGCAGCTGAGAAAATAATTGAACATTTAGAAAGTACACTCGAAGATGCTGACGGTGTGACTCCAGTTCACGGACGATTCTATAAGTTAGCCTCGGAATATTACAGAGTCCGTGGTCCGACTGGCCGTTACTACCGCGCAGCGCTTCGGTACGTTGGCTGCGCCGACGGGGGTGAGGCCCTACCTGCCACGGAACGTGCTGATATCGCCTTCAGACTAGCTCTCTCTGGAGTGCTGGCTCCGGACGTATATGATTTGGGAGAATTGTTGGCTCACCCAATTCTTCATTCTCTGAGGGGCACGCCCAATGAATGGGCCTGTGAACTGGTCAAAGCTGTATCGGTTGGAGACGTTGGTGCCTTCGAGAGGATCCGGGCCAAATCCAACTGCGACGAATTACACAAAGCAGACAGGCAACTGAGACAGAAAATTGCGATTCTGTGCTTAATGGAGATGGCCTTCAATAAATCCTCATCTCAGAGGAAGCTGTCGTTCGAGGAGATAGCCCGTGAAGCCAGAATACCCCTCGACGAAGTCGAACTCCTCATCATGAAGGCTTTGGCTGAAAAGTTAATTAGAGGACATATAGATCAGGTGCGGTCGTGCGCGACGGTGCAATGGGTGCGGCCGCGTGCGCTGGCCGGGGCAGGCGCCGTGCTGACGGCAGCGCGGGTGGACGCGTGGCGAGAGGCGGTCTCCGCGGCCGCCGACCTGCTGGCTACCGTGCAGCCCGACCTCATCATCGCTTGA

Protein

MATVKFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEWACELVKAVSVGDVGAFERIRAKSNCDELHKADRQLRQKIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIRGHIDQVRSCATVQWVRPRALAGAGAVLTAARVDAWREAVSAAADLLATVQPDLIIA

Uniprot

Q2F5J1   H9JNY3   A0A194PSP5   I4DQ49   S4PD39   A0A194RJ90   + More
A0A3S2P4N4   A0A2W1BRM2   A0A2H1VPB4   A0A1Y1N2N5   E9IUG1   A0A0J7P046   A0A026WSN7   A0A0L7QWZ2   A0A195CT28   E2BGW0   A0A154PEQ4   A0A2A3EKE0   A0A151IT27   A0A158NNB4   F4WLH2   A0A151XAD5   A0A1W4WNL4   A0A0M8ZUV8   A0A195FWC4   A0A2P8XSD0   D2A3P2   A0A195AUZ7   A0A2J7QN91   A0A232FLS0   E0W1V2   R4WDY4   U4UB34   A0A1B6C6Y1   N6TBD4   A0A1B6GVK3   A0A088AD16   A0A1B6I5W3   A0A069DTT0   A0A224XE42   A0A0V0G438   A0A1B6M1C9   A0A0P4VRL8   T1HTI5   A0A1J1HJ12   R4G4S9   A0A2R7VYX1   A0A1L8DT85   A0A1L8DT72   Q16F31   A0A023ER33   A0A1S4G385   U5EVR7   A0A1B0CJ11   A0A2M3Z5S2   A0A2M4BRW4   A0A182FP76   A0A2M4AF78   W8C7E4   A0A023ES98   A0A1A9XKT5   A0A1B0AVB3   A0A0L0CBV9   W5JLM8   D3TN29   A0A1A9ZMA3   A0A034WMH5   A0A182MSQ0   A0A0K8W1I4   A0A182JYW1   A0A1Q3FE80   A0A182PGK1   B0WDK5   A0A0A1WMI5   A0A182J271   A0A182UVW5   A0A182U786   A0A182WSL4   Q7PXY1   A0A182HLG4   A0A1I8NC55   A0A0A9XLW8   A0A1A9X2C9   A0A182NS06   A0A1A9VS58   A0A182QKY1   A0A1I8QDQ4   E2AJ34   A0A0K8S4B8   A0A084VGT3   A0A182YB53   B4R239   B4HFX7   Q7KMP8   B3P8F0   B4PNW9   A0A1W4ULS6   B3LY58   A0A182RZA1  

Pubmed

19121390    26354079    22651552    23622113    28756777    28004739    + More
21282665    24508170    30249741    20798317    21347285    21719571    29403074    18362917    19820115    28648823    20566863    23691247    23537049    26334808    27129103    17510324    24945155    26483478    24495485    26108605    20920257    23761445    20353571    25348373    25830018    12364791    14747013    17210077    25315136    25401762    26823975    24438588    25244985    17994087    10893261    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

DQ311432    ABD36376.1    BABH01009736    KQ459593    KPI96332.1    AK403929    + More
BAM20039.1    GAIX01003816    JAA88744.1    KQ460152    KPJ17405.1    RSAL01000024    RVE52235.1    KZ149962    PZC76294.1    ODYU01003649    SOQ42670.1    GEZM01014236    JAV92171.1    GL765974    EFZ15793.1    LBMM01000586    KMQ98020.1    KK107109    QOIP01000008    EZA59047.1    RLU19942.1    KQ414706    KOC63086.1    KQ977372    KYN03284.1    GL448228    EFN85092.1    KQ434889    KZC10356.1    KZ288220    PBC32160.1    KQ981037    KYN10164.1    ADTU01021202    GL888208    EGI64908.1    KQ982351    KYQ57290.1    KQ435878    KOX70009.1    KQ981208    KYN44726.1    PYGN01001429    PSN34902.1    KQ971348    EFA05541.1    KQ976738    KYM75850.1    NEVH01013198    PNF30056.1    NNAY01000050    OXU31533.1    DS235873    EEB19546.1    AK417969    BAN21184.1    KB632003    ERL87811.1    GEDC01028239    JAS09059.1    APGK01044204    KB741021    ENN75033.1    GECZ01003301    JAS66468.1    GECU01025397    JAS82309.1    GBGD01001797    JAC87092.1    GFTR01005690    JAW10736.1    GECL01003334    JAP02790.1    GEBQ01010250    JAT29727.1    GDKW01000878    JAI55717.1    ACPB03017753    CVRI01000006    CRK87907.1    GAHY01000506    JAA77004.1    KK854135    PTY11890.1    GFDF01004569    JAV09515.1    GFDF01004579    JAV09505.1    CH478517    EAT32839.1    JXUM01060246    JXUM01060247    GAPW01001988    KQ562094    JAC11610.1    KXJ76703.1    GANO01001756    JAB58115.1    AJWK01013948    GGFM01003126    MBW23877.1    GGFJ01006387    MBW55528.1    GGFK01006076    MBW39397.1    GAMC01008061    JAB98494.1    GAPW01001987    JAC11611.1    JXJN01004182    JRES01000634    KNC29740.1    ADMH02000799    ETN65026.1    CCAG010009277    EZ422831    ADD19107.1    GAKP01003098    JAC55854.1    AXCM01002120    GDHF01007350    JAI44964.1    GFDL01009182    JAV25863.1    DS231898    EDS44614.1    GBXI01014659    JAC99632.1    AAAB01008987    EAA00931.2    APCN01000897    GBHO01022993    GDHC01011201    JAG20611.1    JAQ07428.1    AXCN02000262    GL439932    EFN66566.1    GBRD01017686    JAG48141.1    ATLV01013084    KE524839    KFB37177.1    CM000364    EDX14096.1    CH480815    EDW43370.1    AF145311    AE014297    AY061232    AAF08392.1    AAF56173.1    AAF56174.1    AAL28780.1    CH954182    EDV53974.1    CM000160    EDW98179.1    CH902617    EDV43962.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000283053    UP000036403    UP000053097    + More
UP000279307    UP000053825    UP000078542    UP000008237    UP000076502    UP000242457    UP000078492    UP000005205    UP000007755    UP000075809    UP000192223    UP000053105    UP000078541    UP000245037    UP000007266    UP000078540    UP000235965    UP000215335    UP000009046    UP000030742    UP000019118    UP000005203    UP000015103    UP000183832    UP000008820    UP000069940    UP000249989    UP000092461    UP000069272    UP000092443    UP000092460    UP000037069    UP000000673    UP000092444    UP000092445    UP000075883    UP000075881    UP000075885    UP000002320    UP000075880    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000095301    UP000091820    UP000075884    UP000078200    UP000075886    UP000095300    UP000000311    UP000030765    UP000076408    UP000000304    UP000001292    UP000000803    UP000008711    UP000002282    UP000192221    UP000007801    UP000075900   

PRIDE

Q2F5J1    H9JNY3    Q7KMP8   

Pfam

PF01399   PCI        + More
PF04083   Abhydro_lipase

Interpro

IPR036390   WH_DNA-bd_sf        + More
IPR035298   PSMD13       
IPR000717   PCI_dom       
IPR029058   AB_hydrolase       
IPR006693   AB_hydrolase_lipase       

SUPFAM

SSF46785   SSF46785        + More
SSF53474   SSF53474       

Gene 3D

3.40.50.1820    

ProteinModelPortal

Q2F5J1   H9JNY3   A0A194PSP5   I4DQ49   S4PD39   A0A194RJ90   + More
A0A3S2P4N4   A0A2W1BRM2   A0A2H1VPB4   A0A1Y1N2N5   E9IUG1   A0A0J7P046   A0A026WSN7   A0A0L7QWZ2   A0A195CT28   E2BGW0   A0A154PEQ4   A0A2A3EKE0   A0A151IT27   A0A158NNB4   F4WLH2   A0A151XAD5   A0A1W4WNL4   A0A0M8ZUV8   A0A195FWC4   A0A2P8XSD0   D2A3P2   A0A195AUZ7   A0A2J7QN91   A0A232FLS0   E0W1V2   R4WDY4   U4UB34   A0A1B6C6Y1   N6TBD4   A0A1B6GVK3   A0A088AD16   A0A1B6I5W3   A0A069DTT0   A0A224XE42   A0A0V0G438   A0A1B6M1C9   A0A0P4VRL8   T1HTI5   A0A1J1HJ12   R4G4S9   A0A2R7VYX1   A0A1L8DT85   A0A1L8DT72   Q16F31   A0A023ER33   A0A1S4G385   U5EVR7   A0A1B0CJ11   A0A2M3Z5S2   A0A2M4BRW4   A0A182FP76   A0A2M4AF78   W8C7E4   A0A023ES98   A0A1A9XKT5   A0A1B0AVB3   A0A0L0CBV9   W5JLM8   D3TN29   A0A1A9ZMA3   A0A034WMH5   A0A182MSQ0   A0A0K8W1I4   A0A182JYW1   A0A1Q3FE80   A0A182PGK1   B0WDK5   A0A0A1WMI5   A0A182J271   A0A182UVW5   A0A182U786   A0A182WSL4   Q7PXY1   A0A182HLG4   A0A1I8NC55   A0A0A9XLW8   A0A1A9X2C9   A0A182NS06   A0A1A9VS58   A0A182QKY1   A0A1I8QDQ4   E2AJ34   A0A0K8S4B8   A0A084VGT3   A0A182YB53   B4R239   B4HFX7   Q7KMP8   B3P8F0   B4PNW9   A0A1W4ULS6   B3LY58   A0A182RZA1  

PDB

6EPF     E-value=2.93768e-80,     Score=760

KEGG

693113    K03039 26S proteasome regulatory subunit N9 | (RefSeq) 26S proteasome non-ATPase regulatory subunit

PATHWAY

03050    Proteasome - Bombyx mori (domestic silkworm)

GO

GO:0000502   GO:0005198   GO:0005829   GO:0043248   GO:0005634   GO:0008541   GO:0006511   GO:0005838   GO:0007623   GO:0008063   GO:0005654   GO:0043161   GO:0006629   GO:0005737   GO:0005515   GO:0003677   GO:0045747   GO:0000287   GO:0004715   GO:0007067   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR10539  

Subcellular location

Cytoplasm  

Length:

385

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00371000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01159

outside

1  -  385

 

 

Pi

277.908997

Theta

187.786615

Tajima's D

1.481743

CLR

0.444191

CSRT

0.779611019449028

Interpretation

Uncertain