SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14040
Pre Gene Modal
BGIBMGA011238
Annotation
PREDICTED:_uncharacterized_protein_LOC101737369_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.257
 

Sequence

CDS
ATGGCGCTGCAACCCCAGCAGTTTTGCGTCCGTTGGAATTCTTATCACACTAATCTACAGGCCGTTTTCCCGCGCCTGTTACTGACCGAACAATTCGCTGACGTCACGTTAGCGTGCGAATCGCGTCAGCTGCGATGCCACAAGCTGGTCTTGTCAGCATGCTCGGCGTACCTCGAGAGGCTATTGCTGCAGAACCCCTGCGACCATCCCATCGTCCTGATGCGGGACATGAGGTTCAGTGAAATGCAGGCACTAGTCGACTTTATGTACAAAGGGGAAGTGAACGTGACCCAAGAGGAGCTGCCGAGCCTCCTGAAGTCAGCCGAGGCTCTGCAGATCAGAGGTCTCTGCTCAAACGACAGTTCCGGTCTGACCGACAGCAAACCCGAGACGAAGGACTTCACCGTCGCCAGCGACGCCCTCGTCGCGAACGCACAGAAGGACAACCCCACTACCAATGGACCGAGTCAAGCGCCTAAGTCGATACCCCAGTCATCTCCCAACGGACCTAAGAAACGGAAATCTGAAGACCTGGCTGCTGATGTGAAGGAGGAAACCGTCGAGGAAGACGGACTGTATTACGGCGAAATGGATAACGACCCCATGGAATACAACGAGGACGACGAACCAGGGAAACCGGGCAGCAGTCTTGGTCAGCCATCAGGGAGCCGCCGCGACTACGTGCGCGTGAAGCCGGAGAGCGAATTGTTTTTTCAAAATAAACTGCAGAATTTAGCGAAAGCCAATTCCGAATACATCAACAGGCTATCCAAAATGAACGCTGTGGAAATAAAAAATGAATTTTCCAAATACGGGCTCAATACGAACGCCACAGAAGAATATTTACAGCAGAAGAACGCAGAGAAAGCAGAGAATGACTATTACAAATCATGGTTGGAGCAAAATGGCGAGCTCGAAGTGTCTCTCCTGAGAGCGAGCCAAGTGAAGAAGTCGAGGATCGAGCAGAAACCGCAAAAATCCGAGGTGGAACTGATCCCCAAAAGTGTTGTCAACAAAGAGATTTACCGGAAAATCGGGGAAAAAGCGCAGATCAGACGAAGGGGCAGGCCGCCTATTTTCAAAGATAAAAACGTTGATATAGGCGACACGGTGCTCAAGTCGGACCTGGATCAGTTCTTGGAGGGCAAAGAGATCAGTTCCTCGGGCTTGTCGCGTAAAGACCTGGAGAGGGTCATGATGGGGAAATTCAATCCTAATAGGAGGTACTCGAACGAGGCCATGTGGGCAGCCCTAATGGATGTCAAGAAGGGCGGGAGTATTTACAGGGCCGCCCAAACTCATAAAGTGCCCAGAAAATCGCTGCGTAACTGGATGAAGCGCTGCCACATCAAGTCGTCCTTCCCGATGCCGCAGCAACTGAAGCAGTTCGTCGAGAACAGCAAGCGTCAGAAGGAGTATAAGCATTACGAGTGCCTCAACGCGGGCGACCCTCAGCCTCAGGACAAGAGCGAGAACGAAACCGAACTGGACTTTGGCAAGCATTTCCTGTCGTTCGCGAATAATGTGTCCAGCGAGGACGAAGCCCCCAAAACTGGGGAGAAATCTCCCGAATTAAAGGGCGACTGCGATGGCAATACCGTCCTTGATATGTCATTGCATGAATAA
Protein
MALQPQQFCVRWNSYHTNLQAVFPRLLLTEQFADVTLACESRQLRCHKLVLSACSAYLERLLLQNPCDHPIVLMRDMRFSEMQALVDFMYKGEVNVTQEELPSLLKSAEALQIRGLCSNDSSGLTDSKPETKDFTVASDALVANAQKDNPTTNGPSQAPKSIPQSSPNGPKKRKSEDLAADVKEETVEEDGLYYGEMDNDPMEYNEDDEPGKPGSSLGQPSGSRRDYVRVKPESELFFQNKLQNLAKANSEYINRLSKMNAVEIKNEFSKYGLNTNATEEYLQQKNAEKAENDYYKSWLEQNGELEVSLLRASQVKKSRIEQKPQKSEVELIPKSVVNKEIYRKIGEKAQIRRRGRPPIFKDKNVDIGDTVLKSDLDQFLEGKEISSSGLSRKDLERVMMGKFNPNRRYSNEAMWAALMDVKKGGSIYRAAQTHKVPRKSLRNWMKRCHIKSSFPMPQQLKQFVENSKRQKEYKHYECLNAGDPQPQDKSENETELDFGKHFLSFANNVSSEDEAPKTGEKSPELKGDCDGNTVLDMSLHE

Summary

Pfam
PF00651   BTB
Interpro
IPR011333   SKP1/BTB/POZ_sf        + More
IPR009057   Homeobox-like_sf       
IPR000210   BTB/POZ_dom       
SUPFAM
SSF54695   SSF54695        + More
SSF46689   SSF46689       
PDB
4HXI     E-value=0.000147076,     Score=109

Ontologies

Topology

Length:
541
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00287
Exp number, first 60 AAs:
0.00281
Total prob of N-in:
0.00092
outside
1  -  541
 
 

Population Genetic Test Statistics

Pi
251.892574
Theta
180.542549
Tajima's D
0.989569
CLR
0.403933
CSRT
0.658717064146793
Interpretation
Uncertain
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