SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14039
Pre Gene Modal
BGIBMGA011239
Annotation
hypothetical_protein_RR46_12364_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.354
 

Sequence

CDS
ATGAACATACACGCAAGGCCCCGGGTCGTGGGGCGGAGGCCTAACGCCATCGTGAATATCGAGACCGACGTGTTCCAAGAAAAGTCTTATAAGCAATATTCCTCGCAGCATCTCAGAGACGCTCTGATCGCCGTCAAGAAGGGTTACAGCGTGTACGCAGCATCAAACAAATATGGAGTGCCCAGGAAAACTCTAAGGAATTGGATGGAGAAATATGATATAAAGAGTCAATTTTCTAAAGGCAGGCGGGGGACGAGACCAACTCAGATCTTAGATCCCTTGGACCTGATGGTGGAGTCCCAGTTCGCCATAGCCAACGTTCAGTGCCAATACGACAGCCCCTCCGATTCAGAAGCGGAGTCGACCCGGCGTGTGACCGTCACAGACGACCACACTTACGGCACGAAGGACGAGCCTCCAGCCTTTATTATACAGCACGTGAAAACCAATACGGTCCCAGCGATACCACCTACCTTCCTAGAGATCAGACCGAAGATCATGACCATCAGTCCCGGGAGCTCGCCGTCGGTAAACCTGATACAAGTCCGAGATCAGCCCCAGGTGAGCCAGTCGTCTCAACCGATGGAATACCACATAAACAAGAGGATCCGTCGCAGTGAGGTCGTCTTGAGACAGGCCGCGGACTGCGTCAGTCGAGGGTCCACTTTCCAAACGGTTTCCGAACAGTTCAACATCCCGATATCTACTATAAGATTCTTTATGGCGAGAAAAGGCATCTTGCCGAAACGAAGGCGTGGGCGAACTAATTATTTCACGAAAGTGGAAGAGCAGCCGCAAATGGTGGTTCAGACTCCAGCGTGTAGCAGTCCCGAGCCCCCATTCCACATGCAGCACTTCAAGCTGCCCGAGATGGTAGCGCTGAAGGAGGACGACGAGGAGCCATCGGCGAACACGTAG
Protein
MNIHARPRVVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGTRPTQILDPLDLMVESQFAIANVQCQYDSPSDSEAESTRRVTVTDDHTYGTKDEPPAFIIQHVKTNTVPAIPPTFLEIRPKIMTISPGSSPSVNLIQVRDQPQVSQSSQPMEYHINKRIRRSEVVLRQAADCVSRGSTFQTVSEQFNIPISTIRFFMARKGILPKRRRGRTNYFTKVEEQPQMVVQTPACSSPEPPFHMQHFKLPEMVALKEDDEEPSANT

Summary

Pfam
PF05225   HTH_psq
Interpro
IPR009057   Homeobox-like_sf        + More
IPR007889   HTH_Psq       
SUPFAM
SSF46689   SSF46689       

Ontologies

Topology

Length:
305
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01055
Exp number, first 60 AAs:
0.00076
Total prob of N-in:
0.05636
outside
1  -  305
 
 

Population Genetic Test Statistics

Pi
168.804328
Theta
41.541017
Tajima's D
1.227388
CLR
1.224923
CSRT
0.726713664316784
Interpretation
Uncertain
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