SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14036
Pre Gene Modal
BGIBMGA011241
Annotation
PREDICTED:_uncharacterized_protein_LOC106131024_isoform_X1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.533
 

Sequence

CDS
ATGATATCGCAGCCAAAAAACAGAGTACAAGCCATAAAGAGTAAATTCGAGAACTTAGGAAACGAGAACAAACCGCTCTTGATAAAACACACAACCACACAGTTGTGTAAACAGAAAAATAGCGGAGTGAACATTGAAGAAAAACACGATCAAGCTATTGTAAACCATGAGAAGAACGTAGGATTTGACTCATCAATCGGCGACCACGAACCTAGGCCAAATACCAGCTATTTATATAGCAGAGCTGATCTGAAGGCCATTAACAGTGACAATAAAACCTGTTTATCACGTCAAACCAGTGACCCAGGAAAAAAGTTGCACAGGAGTCATGCTTTTAGATGTGATAGAAATCAAATAGCACCTAAAAGGCACGGTAGCTGTAACGAGGAACAAATGAAGAAGGAGAATTTCACGCCACAAGGTTGCACTGAGGATGTGGCGAACACGAATTCAGTGCCGGATAGCCAAGTGCCACAGTCCATTTTAGACCAATATGCTAAAGTCAACAAAGTGAAGAAAAAAGATGAAAAACAAGATTCCACAACTGATAGTGGAGTGAGCTCTGAGACTGAGAATCTGGATGATGAGAAGGGACGTATAAAGAAACTAATGACACAATTTGAGAAAAAATCTGAAGTAACACCAAATTTAGAATCTATGGATCAATTGTCAGCTTCCAGTGAGACCATGAAGCTGGAGCGCAAGAATCCGCATCTAAAACTAACGGACACATTAAAGAAGGCATTAAAACAACCATTACCAGCTGGTCCTCCACCGAAAAAACCACCAAGAGTCTTTGCTACCATAACTGAAAACGTGGAAACACCTAAGAAAGACCCAAAAAAGATGCTCGAAAAACTGGAACAGGTATATGAGCAACGAAAAGCTGATCAGAGCAAAAATATCAAAACAGCAAGTCCAAAAAAACCCAGAGAAGTACACTATCTGTGCACCGAAATCCTAGACATAGCACAGAGGACTCTACCACCGATTCATCCATCAGATCCTCTGTCCAGATGCTTCAAGTCCTTAAATTATAAAAAGTCTGAATTCTTCGTTGATAAGGAGCATGTGTATAACGAACCATACAATGGGGATACAAGAACGGAATGCGAGAGAAGGAGTCATTACGGGACTCTTAATACTTTGAAGACCTCTAGCCGAAGCTTGGAAGAGCTACGACCGATTAAGAAGGAAGAGGACGAGGTTATTTACGACGTACCAGCCGAGGAAACCCGCCCGGATTCGCCGGCGAGCACGAAAAGCGACTTCCTCAAGCTCCGGGAGAATTTCGAGAATCCTAGTCAGCCAATGAGGGAGACGGATGCGCTCAAACCGATCTTGAAGCTGTCAAGGTCGACAGAGAACATAGAGGATAGCTTGAAGAAGAACATGACCAGGAAGTTTTGGACGGAGACGAAAAGAACCAGGAATCGATGCGAGGTTCTGACGAGGGAGAGTCCGCCAAAGAGCTACAACCAGTTGCACGTGGACAAGGAGAATCTGAATCGTCTCATGAACGAAATATACGAGACGGTGACAGCGGCCTGCAACATGGACGAGAATAGACCCGGGTGCTTCCCAACCGAGAACTCCGACGGCAGTACCAGCGAAGAATCTGTCAAAATAACCAGGAACCTAACAGAGAAACGCAAGAACTACGTCCGCAGGGTCTCCAGTCGGGTAGCGTATCTCGATAAGAAGCCGATAACCCAGAAATACCGTCACCAAACGTCGGTCTGCTCCTACAAGCCGGACGCACCCGAGAACCAGTACTCGACGTTTAGATCCTGGAAGAGCTTCAGGGCGTCGCAGACGAACCTACCGAAACTAAGAATGGATTCGTTGGATTCGAAATGCAATCTCACCGACTCCTGCGGGAATCTGTTGACTGGAGACCTCGACGGGTTGAGTATCGATGAAAAGGCCGGGTGCTTAGATATTGAGCTGCCTTTCGAGCCAAGGGAGAAGGGACTGTTTAATGTGTGCCTTCTGGTCGGCATGAACTACATGACCGGCCAGGCGTACGTGAAGAGCGTCTTCCCGAAGCAGGTGCAAGTGCCGCCGCACATCGAGAACCTGATATTCCCCGAAACGTTGAGCACTGATTCGAAGAGCGAGTGGTCGGCCAACGCGACAGACACTCAGTGCTACTCATTGGTGCTCACCGACGAGAGAGGCGAGAGATCTTACGGATACTGCCGAAGAGTTCTCCCCGAAGGTGGAACCAGCTGCCTCCCCCTGTGCTATTGCCTGATCGGGAAATACAGAGCACCTGGGTTTTATTATAAGGTCCTCAAAGAAATCGAATCTCACCACGGCAGCTGCGAGACGAACATCAACTTCGTGCTGCAGAAGCTGTTCGAGATGGACTTCCCGGAGCCCGGCCAGGGCGTCCCGGTGCCGCACAGGCCCAGGACCGTGCCGGACTACAGACAGTGCAAAAGTGAACTCACATGTGAAAGTGCTAACGGTGCAAGTGTAAACAGTGCAAGTGACAGTGCAAAGTGCAACGACTATGATGTGCCGGAGTACTCTGACCTGCAGAACAACAACGGACCGAAGGAAGTCCTGCTGGACCTCTGCAGTCCGGGCTCTAAGGTTATCAAGCGGCCGATAGTACCTCGGGTGGACGAGGATTGCCTCTCTAAGATGCTGGACCTGCTCGGCTCCGGGCTGGCGATCAAGGTGTTCGGCTCCCTGCTCCTGGAACGAAAGGTCATCATAGTCGGGGATAAACTAAGCGACATCTCGAGCTGCCTGGAGGCCCTGCAGCTGTCTCTGTACCCGATGGTTTGGCAGCAGCCCCTGATATCGACGGTCCCGGGGGAGATCCAGCACGAGGCCATGGACGCCCCGCTGCCGATGCTGGCCGGGATGCTGAAAACCCAGGACTTGGACACCAGCGGCGTTGGTTTCGAAGAGGGTATGCTGATAGACCTGACGCATCCGTCCAAATTGAGGTTCTACCAGGGCGACGAGTCCACGATCCTGCCTACGTCGAGCTACAAGACCCTGAAGACCTCCTTACAGATGGAGTCCACCAAAAACAAGGACAAGCAGGAAGACACGAAAACCCGCAACGTGATGATCTCGGAGGCGTTCATGAGGTTCTTCGTGGAGATTCTGGACGGGTACTGGAGGCACCTCCGGGTCGGCGTCGTCGGCGAGGCGGACCTGGGCAATGACGGAGTCTTGTTCGACAAAGAGTCGTTCATCAAAAGCGCCACCACGAAGCAGAACCACTACTTCCTGGAGTGGTTCACGGAGACGGCGATGTTCAATCACTTCATCCGGAACATGTGTACCCGACACGCCGCCGCCGCCGGAGCCCTACAGGACACCCCGCTGCCGGACTACTACGACCAGTTCCTCGACAGGGTCACCAGCCGGAGCCGGTTCGCGACACAAAAGATCGAGGGGAAGAACTATCGGGGAGCCGTCAATAGGAAGGTCAGGCTGCTGAAGAACAAGCTCAAGGACTTGATAGGATGA
Protein
MISQPKNRVQAIKSKFENLGNENKPLLIKHTTTQLCKQKNSGVNIEEKHDQAIVNHEKNVGFDSSIGDHEPRPNTSYLYSRADLKAINSDNKTCLSRQTSDPGKKLHRSHAFRCDRNQIAPKRHGSCNEEQMKKENFTPQGCTEDVANTNSVPDSQVPQSILDQYAKVNKVKKKDEKQDSTTDSGVSSETENLDDEKGRIKKLMTQFEKKSEVTPNLESMDQLSASSETMKLERKNPHLKLTDTLKKALKQPLPAGPPPKKPPRVFATITENVETPKKDPKKMLEKLEQVYEQRKADQSKNIKTASPKKPREVHYLCTEILDIAQRTLPPIHPSDPLSRCFKSLNYKKSEFFVDKEHVYNEPYNGDTRTECERRSHYGTLNTLKTSSRSLEELRPIKKEEDEVIYDVPAEETRPDSPASTKSDFLKLRENFENPSQPMRETDALKPILKLSRSTENIEDSLKKNMTRKFWTETKRTRNRCEVLTRESPPKSYNQLHVDKENLNRLMNEIYETVTAACNMDENRPGCFPTENSDGSTSEESVKITRNLTEKRKNYVRRVSSRVAYLDKKPITQKYRHQTSVCSYKPDAPENQYSTFRSWKSFRASQTNLPKLRMDSLDSKCNLTDSCGNLLTGDLDGLSIDEKAGCLDIELPFEPREKGLFNVCLLVGMNYMTGQAYVKSVFPKQVQVPPHIENLIFPETLSTDSKSEWSANATDTQCYSLVLTDERGERSYGYCRRVLPEGGTSCLPLCYCLIGKYRAPGFYYKVLKEIESHHGSCETNINFVLQKLFEMDFPEPGQGVPVPHRPRTVPDYRQCKSELTCESANGASVNSASDSAKCNDYDVPEYSDLQNNNGPKEVLLDLCSPGSKVIKRPIVPRVDEDCLSKMLDLLGSGLAIKVFGSLLLERKVIIVGDKLSDISSCLEALQLSLYPMVWQQPLISTVPGEIQHEAMDAPLPMLAGMLKTQDLDTSGVGFEEGMLIDLTHPSKLRFYQGDESTILPTSSYKTLKTSLQMESTKNKDKQEDTKTRNVMISEAFMRFFVEILDGYWRHLRVGVVGEADLGNDGVLFDKESFIKSATTKQNHYFLEWFTETAMFNHFIRNMCTRHAAAAGALQDTPLPDYYDQFLDRVTSRSRFATQKIEGKNYRGAVNRKVRLLKNKLKDLIG

Summary

Uniprot
ProteinModelPortal
PDB
3TW8     E-value=5.20586e-09,     Score=150

Ontologies

GO

Topology

Length:
1164
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00424
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  1164
 
 

Population Genetic Test Statistics

Pi
205.248106
Theta
170.263271
Tajima's D
0.818021
CLR
0.260357
CSRT
0.611119444027799
Interpretation
Uncertain
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