Gene

KWMTBOMO14031  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011360

Annotation

Putative_glycogen_[starch]_synthase_[Papilio_xuthus]

Location

Bomo_Chr23(+):16224579-16226991      View in EpiBrowser

Full name

Glycogen [starch] synthase      

Location in the cell

Nuclear   Reliability : 2.617

CDS

ATGTCTCGCCGTCAGCGCATCATACAGAGAAACCGAACTGAGAGACTGTCGGATCTACTGGACTGGAGAAACCTTGGAATTTACTACCGCCAGGCCCGCGCACGCGCCCTGCGCACCGTGTACCCGGAGTACGTGGACCACGCGGACGTGCAGCTGGAGCGCGCCTTCACCTACCCGCGCCCGCTGTCCGAGCCGCCCAGCCCCGCGCACTCCAGAGCCACGACTCCGGCCGCCTCGGTCCATGGCTCCGACAGCGAGGAGGACGAGGTGGACGACGAGAAGGAGCTGGCTGAGTTGAGGATCAGCCACGACTGA

Protein

MSRRQRIIQRNRTERLSDLLDWRNLGIYYRQARARALRTVYPEYVDHADVQLERAFTYPRPLSEPPSPAHSRATTPAASVHGSDSEEDEVDDEKELAELRISHD

Description

Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan.

Catalytic Activity

[(1->4)-alpha-D-glucosyl](n) + UDP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + H(+) + UDP

Similarity

Belongs to the glycosyltransferase 3 family.

Uniprot

H9JPA6   X1WJ70   A0A2S2PB22   A0A1W4WEZ1   U5ET57   A0A0P4X0E4   + More
A0A226EK33   A0A0P5U4J6   A0A1B6CEG2   A0A1B6BX67   A0A0V1IQ93   A0A0V0SD44   A0A0V1IQ64   A0A0V0YMF2   A0A0K2U7L9   A0A0V1HYM9   A0A3Q8ALM2   A0A0V1BYC6   A0A0V1BY26   A0A0V1DDJ9   A0A0V0SE28   A0A0V1PF14   A0A0V0WWD4   A0A0V1LJH6   A0A0V0UJ15   A0A0V1MYK2   A0A0V0SCR9   A0A0V1A941   A0A0V1PEZ8   A0A0V1IQL7   A0A0V0UII9   A0A0V1BY39   A0A0V0VW75   A0A183ID31   T1IBT2  

EC Number

2.4.1.11

Pubmed

19121390   

EMBL

BABH01009723    BABH01009724    ABLF02022043    ABLF02022048    ABLF02062388    ABLF02065553    + More
GGMR01013507    MBY26126.1    GANO01002077    JAB57794.1    GDIP01248071    JAI75330.1    LNIX01000003    OXA58002.1    GDIP01122076    JAL81638.1    GEDC01025489    JAS11809.1    GEDC01031654    JAS05644.1    JYDS01000112    KRZ24888.1    JYDL01000017    KRX24550.1    KRZ24883.1    JYDU01000002    JYDR01000008    JYDT01000010    JYDV01000021    KRY01524.1    KRY77187.1    KRY91887.1    KRZ41332.1    HACA01016908    HACA01016909    CDW34269.1    JYDP01000015    KRZ15827.1    KU556837    AQT25652.1    JYDH01000005    KRY41974.1    KRY41972.1    JYDI01000015    KRY59075.1    KRX24549.1    JYDM01000016    KRZ94773.1    JYDK01000046    KRX80000.1    JYDW01000039    KRZ59664.1    JYDJ01000001    KRX51064.1    JYDO01000024    KRZ76859.1    KRX24548.1    JYDQ01000020    KRY21018.1    KRZ94774.1    KRZ24887.1    KRX51066.1    KRY41973.1    JYDN01000004    KRX67743.1    UZAM01006853    VDO94621.1    ACPB03004993   

Proteomes

UP000005204    UP000007819    UP000192223    UP000198287    UP000054805    UP000054630    + More
UP000054632    UP000054815    UP000054826    UP000054995    UP000055024    UP000054776    UP000054653    UP000054924    UP000054673    UP000054721    UP000055048    UP000054843    UP000054783    UP000054681    UP000050793    UP000015103   

PRIDE

H9JPA6   

Pfam

PF05693   Glycogen_syn        + More
PF03015   Sterile

Interpro

IPR008631   Glycogen_synth        + More
IPR033640   FAR_C       

CDD

cd09071  FAR_C
cd03793  GT1_Glycogen_synthase_GSY2_lik

ProteinModelPortal

H9JPA6   X1WJ70   A0A2S2PB22   A0A1W4WEZ1   U5ET57   A0A0P4X0E4   + More
A0A226EK33   A0A0P5U4J6   A0A1B6CEG2   A0A1B6BX67   A0A0V1IQ93   A0A0V0SD44   A0A0V1IQ64   A0A0V0YMF2   A0A0K2U7L9   A0A0V1HYM9   A0A3Q8ALM2   A0A0V1BYC6   A0A0V1BY26   A0A0V1DDJ9   A0A0V0SE28   A0A0V1PF14   A0A0V0WWD4   A0A0V1LJH6   A0A0V0UJ15   A0A0V1MYK2   A0A0V0SCR9   A0A0V1A941   A0A0V1PEZ8   A0A0V1IQL7   A0A0V0UII9   A0A0V1BY39   A0A0V0VW75   A0A183ID31   T1IBT2  

PDB

4KQ2     E-value=1.63572e-09,     Score=143

KEGG

101736417    K00693 glycogen synthase [EC:2.4.1.11] | (RefSeq) glycogen [starch] synthase

PATHWAY

00500    Starch and sucrose metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005978   GO:0004373   GO:0016021   GO:0045747   GO:0000287   GO:0004715   GO:0005634   GO:0007067   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR10176  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.78472

inside

1  -  104

 

 

Pi

289.31185

Theta

211.215517

Tajima's D

1.31808

CLR

0

CSRT

0.748712564371781

Interpretation

Uncertain