Gene

KWMTBOMO14030  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011360

Annotation

Putative_glycogen_[starch]_synthase_[Papilio_xuthus]

Location

Bomo_Chr23(+):16219569-16223413      View in EpiBrowser

Full name

Glycogen [starch] synthase      

Location in the cell

Nuclear   Reliability : 0.996

CDS

ATGTCGCTTAAACCGAATAGCTTTTCGGGCCACGTGCCGGAGCCCACCGAGCTGCTGCTGAAGGAAGACACGGTGCGCCTCAAACGCTGCATTTACGCGCTGCAGCGGGACGGCCTGCCCCCCGTCACCACGCACAACGTCGTGGACGACTGGAGTGATCCTGTGCTGAACTCCATAAGAAGATGCGAGCTGTTCAACACTGTCAATGACAGTGTCAAGGTGATATTCCACCCGGAGTTCCTGACGTCCACGAACCCCCTGTTCGGTCTGGAGTACGAGGAGTTCGTGCGCGGCTGCCACCTCGGCGTGTTCCCCTCGTACTACGAGCCCTGGGGCTACACGCCGGCCGAGTGCACCGTCATGGGCATACCTAGCATCACGACCAACCTGTCCGGGTTCGGTTGCTTCATGCAGGAGCACATCGCGGACCCCATGTCCTACGGGATCTATGTGGTGGACCGGCGGTACATCTCGCTGGAGGGCTCCGTGCAGCAGCTCGCGCAGTACATGTACGACTTCACCAAGTGA

Protein

MSLKPNSFSGHVPEPTELLLKEDTVRLKRCIYALQRDGLPPVTTHNVVDDWSDPVLNSIRRCELFNTVNDSVKVIFHPEFLTSTNPLFGLEYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMQEHIADPMSYGIYVVDRRYISLEGSVQQLAQYMYDFTK

Description

Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan.

Catalytic Activity

[(1->4)-alpha-D-glucosyl](n) + UDP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + H(+) + UDP

Similarity

Belongs to the glycosyltransferase 3 family.

Feature

chain  Glycogen [starch] synthase

Uniprot

A0A2A4IZM5   A0A2A4J261   A0A194PYQ9   S4PCQ0   H9JPA6   A0A212EVT8   + More
F2Q6J8   A0A2P8XAD6   A0A2P8XAU2   A0A067QZJ4   V9II86   A0A2J7RI94   C0KJJ5   A0A0M5L067   A0A158NHQ2   E2A8G5   A0A0N0BF19   A0A2W1BCX3   A0A310SQW7   A0A195C3G8   F4WA55   A0A088ARU9   A0A195E342   A0A195ETM8   A0A195AVG9   A0A2A3EK09   A0A154P9X4   A0A146M539   A0A0L7RDK2   A0A3L8E0G6   A0A151WGI9   A0A026X010   A0A1Y1NDJ9   L7XDA5   D2A654   A0A1A9WAM6   E2BGV0   A0A1B6CEG2   E0VIZ4   A0A336MXU2   A0A336MF37   N6T6G6   A0A286SDK9   A0A2M4AU79   A0A0P4YSJ7   A0A1B6KQ54   A0A023F5E3   T1IBT2   T1PHM8   A0A0P5A2E5   A0A0A9YZ99   A0A0P4Z5E8   A0A1I8MXF1   A0A146L2D4   A0A224X8N4   A0A1L8E1X2   A0A0P4YJE3   A0A0V0GA99   A0A1J1IEQ0   A0A0P5BLK9   A0A1I8NQA2   W8BYZ9   A0A2H8TKY8   A0A1I8NQ95   X1WJ70   E9H1V2   A0A182M1X1   A0A2M4AQU9   A0A182F701   A0A0P4ZWR7   A0A0K8VEP4   A0A0K8TZ14   A0A1W4WEZ1   A0A2S2PB22   W5JVQ3   U5ET57   A0A182JSF2   A0A2W1B718   A0A0A1WCS2   A0A0Q9X5D7   A0A182RBY9   A0A0Q9WY51   A0A1B6BX67   B4KDK1   A0A182Y6H3   A0A0Q9WF19   K7J9L6   A0A0P5AEM6   B4LZW3   A0A164MVF8   A0A0N8BUE1   A0A0L0CI26   A0A0P5BVH2   A0A084WTD6   A0A0P5XJA6   A0A182W0Y2   A0A182XAS3   A0A182UQB3   A0A182LEP3   A0A0P5HDL0  

EC Number

2.4.1.11

Pubmed

26354079    23622113    19121390    22118469    29403074    24845553    + More
21347285    20798317    28756777    21719571    26823975    30249741    24508170    28004739    18362917    19820115    20566863    23537049    25474469    25315136    25401762    24495485    21292972    20920257    23761445    25830018    17994087    25244985    20075255    26108605    24438588    20966253   

EMBL

NWSH01004596    PCG64878.1    NWSH01004113    PCG65482.1    KQ459593    KPI96290.1    + More
GAIX01004061    JAA88499.1    BABH01009723    BABH01009724    AGBW02012131    OWR45581.1    FJ809918    ADA53796.1    PYGN01022381    PSN28952.1    PYGN01006873    PSN29113.1    KK852809    KDR15979.1    JR048785    AEY60765.1    NEVH01003505    PNF40546.1    FJ609646    ACM78946.1    KR075826    ALE20545.1    ADTU01015927    ADTU01015928    GL437593    EFN70285.1    KQ435814    KOX72681.1    KZ150448    PZC70836.1    KQ760869    OAD58770.1    KQ978350    KYM94723.1    GL888041    EGI68911.1    KQ979763    KYN19294.1    KQ981975    KYN31605.1    KQ976737    KYM75969.1    KZ288222    PBC32105.1    KQ434856    KZC08736.1    GDHC01004080    JAQ14549.1    KQ414614    KOC68865.1    QOIP01000002    RLU26147.1    KQ983167    KYQ46941.1    KK107069    EZA60734.1    GEZM01005726    GEZM01005725    JAV95963.1    JX974434    AGC97436.1    KQ971346    EFA05468.1    GL448228    EFN85082.1    GEDC01025489    JAS11809.1    DS235215    EEB13350.1    UFQT01002291    SSX33127.1    UFQT01001112    SSX28964.1    APGK01050435    APGK01050436    KB741171    ENN73273.1    KX766455    ASZ80182.1    GGFK01010951    MBW44272.1    GDIP01224171    JAI99230.1    GEBQ01026407    JAT13570.1    GBBI01002358    JAC16354.1    ACPB03004993    KA647393    AFP62022.1    GDIP01205019    GDIQ01224039    JAJ18383.1    JAK27686.1    GBHO01007189    GBHO01007188    GBHO01007186    GDHC01020597    GDHC01004650    JAG36415.1    JAG36416.1    JAG36418.1    JAP98031.1    JAQ13979.1    GDIP01217672    JAJ05730.1    GDHC01016081    JAQ02548.1    GFTR01007741    JAW08685.1    GFDF01001351    JAV12733.1    GDIP01226623    JAI96778.1    GECL01001052    JAP05072.1    CVRI01000048    CRK98691.1    GDIP01182875    JAJ40527.1    GAMC01008059    JAB98496.1    GFXV01002875    MBW14680.1    ABLF02022043    ABLF02022048    ABLF02062388    ABLF02065553    GL732584    EFX74238.1    AXCM01000202    GGFK01009657    MBW42978.1    GDIP01206975    JAJ16427.1    GDHF01017952    GDHF01017130    GDHF01014890    JAI34362.1    JAI35184.1    JAI37424.1    GDHF01033256    GDHF01033009    GDHF01023423    GDHF01020740    JAI19058.1    JAI19305.1    JAI28891.1    JAI31574.1    GGMR01013507    MBY26126.1    ADMH02000177    ETN67493.1    GANO01002077    JAB57794.1    KZ150262    PZC71732.1    GBXI01017533    JAC96758.1    CH933806    KRG00660.1    KRG00661.1    GEDC01031654    JAS05644.1    EDW13835.1    CH940650    KRF83149.1    AAZX01004371    AAZX01005713    AAZX01008566    AAZX01010800    AAZX01011696    AAZX01011880    AAZX01013220    AAZX01014348    AAZX01023909    AAZX01026589    GDIP01200218    JAJ23184.1    EDW67191.1    LRGB01002937    KZS05401.1    GDIQ01143931    JAL07795.1    JRES01000344    KNC32063.1    GDIP01179326    JAJ44076.1    ATLV01026883    KE525420    KFB53480.1    GDIP01071344    JAM32371.1    GDIQ01229082    JAK22643.1   

Proteomes

UP000218220    UP000053268    UP000005204    UP000007151    UP000245037    UP000027135    + More
UP000235965    UP000005205    UP000000311    UP000053105    UP000078542    UP000007755    UP000005203    UP000078492    UP000078541    UP000078540    UP000242457    UP000076502    UP000053825    UP000279307    UP000075809    UP000053097    UP000007266    UP000091820    UP000008237    UP000009046    UP000019118    UP000015103    UP000095301    UP000183832    UP000095300    UP000007819    UP000000305    UP000075883    UP000069272    UP000192223    UP000000673    UP000075881    UP000009192    UP000075900    UP000076408    UP000008792    UP000002358    UP000076858    UP000037069    UP000030765    UP000075920    UP000076407    UP000075903    UP000075882   

PRIDE

H9JPA6   

Pfam

PF05693   Glycogen_syn        + More
PF03015   Sterile

Interpro

IPR008631   Glycogen_synth        + More
IPR033640   FAR_C       

CDD

cd03793  GT1_Glycogen_synthase_GSY2_lik
cd09071  FAR_C

ProteinModelPortal

A0A2A4IZM5   A0A2A4J261   A0A194PYQ9   S4PCQ0   H9JPA6   A0A212EVT8   + More
F2Q6J8   A0A2P8XAD6   A0A2P8XAU2   A0A067QZJ4   V9II86   A0A2J7RI94   C0KJJ5   A0A0M5L067   A0A158NHQ2   E2A8G5   A0A0N0BF19   A0A2W1BCX3   A0A310SQW7   A0A195C3G8   F4WA55   A0A088ARU9   A0A195E342   A0A195ETM8   A0A195AVG9   A0A2A3EK09   A0A154P9X4   A0A146M539   A0A0L7RDK2   A0A3L8E0G6   A0A151WGI9   A0A026X010   A0A1Y1NDJ9   L7XDA5   D2A654   A0A1A9WAM6   E2BGV0   A0A1B6CEG2   E0VIZ4   A0A336MXU2   A0A336MF37   N6T6G6   A0A286SDK9   A0A2M4AU79   A0A0P4YSJ7   A0A1B6KQ54   A0A023F5E3   T1IBT2   T1PHM8   A0A0P5A2E5   A0A0A9YZ99   A0A0P4Z5E8   A0A1I8MXF1   A0A146L2D4   A0A224X8N4   A0A1L8E1X2   A0A0P4YJE3   A0A0V0GA99   A0A1J1IEQ0   A0A0P5BLK9   A0A1I8NQA2   W8BYZ9   A0A2H8TKY8   A0A1I8NQ95   X1WJ70   E9H1V2   A0A182M1X1   A0A2M4AQU9   A0A182F701   A0A0P4ZWR7   A0A0K8VEP4   A0A0K8TZ14   A0A1W4WEZ1   A0A2S2PB22   W5JVQ3   U5ET57   A0A182JSF2   A0A2W1B718   A0A0A1WCS2   A0A0Q9X5D7   A0A182RBY9   A0A0Q9WY51   A0A1B6BX67   B4KDK1   A0A182Y6H3   A0A0Q9WF19   K7J9L6   A0A0P5AEM6   B4LZW3   A0A164MVF8   A0A0N8BUE1   A0A0L0CI26   A0A0P5BVH2   A0A084WTD6   A0A0P5XJA6   A0A182W0Y2   A0A182XAS3   A0A182UQB3   A0A182LEP3   A0A0P5HDL0  

PDB

4QLB     E-value=3.66553e-67,     Score=642

KEGG

101736417    K00693 glycogen synthase [EC:2.4.1.11] | (RefSeq) glycogen [starch] synthase

GO

GO:0004373   GO:0005978   GO:0016021   GO:0005737   GO:0045819   GO:0071329   GO:0009267   GO:0061723   GO:0045747   GO:0000287   GO:0004715   GO:0005634   GO:0007067   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR10176  

Length:

175

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05749

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04627

outside

1  -  175

 

 

Pi

179.726676

Theta

71.467749

Tajima's D

0.361524

CLR

120.97226

CSRT

0.47737613119344

Interpretation

Uncertain