Gene

KWMTBOMO14026

Pre Gene Modal

BGIBMGA011358

Annotation

PREDICTED:_uncharacterized_protein_C1orf198_homolog_[Amyelois_transitella]

Location

Bomo_Chr23(+):16177259-16180587      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.886

CDS

ATGGCGTTGAGCGCCGCTGCCGAAGATTATTTCCGCACTATGAATCCGTTAGCAGCGAAAATTCACGAAGACATAATTGAAGCGAAAAATTTATACGAAAACATCTGGGATTCACTCACGGAAAAGGAAAAAGTGGAACTTTTAAACGACACACTCATAAAACCAGACATCACATTAAAATATTCTCTGCTGGATACATTCAATTTTGATTTGAATGCTTTACCTGCAGAAAAAAATGACTTGATGTCATTCTTTGGCCGCGAACATGGTCAAAAGTTAATACAGGATGAGAATTCCTCGTACAGAGATGAACATTCAGCTCCATTTCTATACCAAACTAAGAGTCAGCTAGATTTGTGCGTTTTAAGCTCTTATAGAGTACCTAAGGAAAAGCCTACTTCACCTCCACCTGTGATGTCTGAATTGGAGTTATCTCACTCTAAAGTTGTGTCAGAATTGAAGAATGCTCTCAAGTCCCATGAGTTACGTTCTCACAAGGAAAGAGAGGTCACTTCACCAGGCTTCATAAGTAAATTCATGGGAAACTTTAAGAGTAAAGATGAAGACAGAGAGTGCTTAGTATTGAGCAACCAGACACAGATTGTTGCTTCTTCAGATAACTTCTTCAAAACAAATTTTAAGAGTGTGCAAAATGATAGCAGAGATTATAGGAATAGTGTGGTGAAATCTAGCAGTGATCTGTCAGAGGAGAACAGGGGATTGTTGTCGTCGTCGCAGGCGTCCTCCGGTACCGACTTCCAGTCGCAGGAGACACTCACCGAATCAATGTCCGCTTTGCCAAAGACCGGCTACGATTTTCTTGATAATTGGTAA

Protein

MALSAAAEDYFRTMNPLAAKIHEDIIEAKNLYENIWDSLTEKEKVELLNDTLIKPDITLKYSLLDTFNFDLNALPAEKNDLMSFFGREHGQKLIQDENSSYRDEHSAPFLYQTKSQLDLCVLSSYRVPKEKPTSPPPVMSELELSHSKVVSELKNALKSHELRSHKEREVTSPGFISKFMGNFKSKDEDRECLVLSNQTQIVASSDNFFKTNFKSVQNDSRDYRNSVVKSSSDLSEENRGLLSSSQASSGTDFQSQETLTESMSALPKTGYDFLDNW

Uniprot

H9JPA4   A0A3S2TPG3   A0A2H1VWK8   A0A194PS79   A0A1E1W4A8   A0A212EVR1   + More
A0A2A4J658   A0A0L7L7E8   A0A194RPB3   A0A0N1ITK7   A0A0L7RB69   F4WQQ6   E2C5C2   A0A026VYJ1   A0A088A7U3   A0A151X3U1   A0A195D849   E9IY63   A0A195CZV6   A0A158NRU4   A0A195ERM7   A0A2J7R5S2   A0A2A3ENL8   A0A195BPX2   A0A336MWH8   A0A336ME82   E1ZWJ0   A0A182JM06   A0A1I8NJD1   A0A1I8PM21  

Pubmed

19121390    26354079    22118469    26227816    21719571    20798317    + More
24508170    30249741    21282665    21347285    25315136   

EMBL

BABH01009721    RSAL01000031    RVE51599.1    ODYU01004881    SOQ45205.1    KQ459593    + More
KPI96296.1    GDQN01009285    JAT81769.1    AGBW02012131    OWR45585.1    NWSH01002975    PCG67158.1    JTDY01002446    KOB71408.1    KQ459875    KPJ19688.1    KQ435793    KOX74194.1    KQ414617    KOC68167.1    GL888275    EGI63419.1    GL452770    EFN76855.1    KK107606    QOIP01000007    EZA48526.1    RLU20892.1    KQ982562    KYQ54949.1    KQ981153    KYN09065.1    GL766908    EFZ14474.1    KQ977041    KYN06151.1    ADTU01024330    KQ981993    KYN30878.1    NEVH01006990    PNF36175.1    KZ288203    PBC33403.1    KQ976424    KYM88567.1    UFQS01001384    UFQT01001384    SSX10635.1    SSX30318.1    UFQT01001042    SSX28605.1    GL434853    EFN74427.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000053240    UP000053105    UP000053825    UP000007755    UP000008237    UP000053097    UP000279307    UP000005203    UP000075809    UP000078492    UP000078542    UP000005205    UP000078541    UP000235965    UP000242457    UP000078540    UP000000311    UP000075880    UP000095301    UP000095300   

PRIDE

H9JPA4   

Pfam

PF15797   DUF4706        + More
PF00096   zf-C2H2

Interpro

IPR031600   DUF4706        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JPA4   A0A3S2TPG3   A0A2H1VWK8   A0A194PS79   A0A1E1W4A8   A0A212EVR1   + More
A0A2A4J658   A0A0L7L7E8   A0A194RPB3   A0A0N1ITK7   A0A0L7RB69   F4WQQ6   E2C5C2   A0A026VYJ1   A0A088A7U3   A0A151X3U1   A0A195D849   E9IY63   A0A195CZV6   A0A158NRU4   A0A195ERM7   A0A2J7R5S2   A0A2A3ENL8   A0A195BPX2   A0A336MWH8   A0A336ME82   E1ZWJ0   A0A182JM06   A0A1I8NJD1   A0A1I8PM21  

KEGG

101736153    no KO assigned | (RefSeq) uncharacterized protein C1orf198 homolog

GO

GO:0003676  

Length:

277

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02801

outside

1  -  277

 

 

Pi

162.458153

Theta

162.959496

Tajima's D

-0.320381

CLR

0.325643

CSRT

0.289085545722714

Interpretation

Uncertain