Silkworm Genome Informatics Database

Gene

KWMTBOMO14022

Pre Gene Modal

BGIBMGA011356

Annotation

PREDICTED:_homeobox_protein_DBX1-B_[Bombyx_mori]

Location

Bomo_Chr23(+):16099799-16120560 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.448

CDS

ATGAAATGGCGGAACTCGAAAGAGCGGGAACTGCTCGCGTCCGGCGGCTCCCGGGAACAAACTTTGCCCAACAAGAACAATCCCCACCCCGACCTGTCGGACGCGGAGGCTGACAAACAGAAGCTGTCTCCTCTATCGCCTATAAACGACGAGCAAAACGAAGAGAAGTCGAAAGTATACCCGACCACATCCGAGTTTCAGGGATACGAAGCCAAGATGAGCGCCGGAGTGCTATTCGCGCGGGAGTTTCCCAATATCGAGGACGCGGAGGAGTTCGACAGCGACGCCAGCGCCTCCGACGAGGAAATTAACGTGACCTGA

Protein

MKWRNSKERELLASGGSREQTLPNKNNPHPDLSDAEADKQKLSPLSPINDEQNEEKSKVYPTTSEFQGYEAKMSAGVLFAREFPNIEDAEEFDSDASASDEEINVT

Uniprot

H9JPA2 A0A2H1VWW4 A0A2W1BJ86 A0A194RJ18 A0A194PU78 A0A3S2LDU4 + More
A0A212EWT5 A0A139WGR6 U4UJU8 N6U7L1 A0A3Q3BWD5 A0A3B4FJU1 A0A3Q4MIH7 A0A3P8QBI1 A0A3P9D965

Pubmed

19121390 28756777 26354079 22118469 18362917 19820115 + More
23537049 25186727

EMBL

BABH01009716 ODYU01004941 SOQ45329.1 KZ150262 PZC71723.1 KQ460152 + More
KPJ17434.1 KQ459593 KPI96309.1 RSAL01000031 RVE51596.1 AGBW02011924 OWR45907.1 KQ971345 KYB27045.1 KB632225 ERL90275.1 APGK01036698 APGK01036699 APGK01036700 APGK01036701 KB740941 ENN77650.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000283053 UP000007151 UP000007266 + More
UP000030742 UP000019118 UP000264840 UP000261460 UP000261580 UP000265100 UP000265160

PRIDE

H9JPA2

Pfam

PF00046 Homeodomain

Interpro

IPR020479   Homeobox_metazoa        + More
IPR000047   HTH_motif
IPR009057   Homeobox-like_sf
IPR017970   Homeobox_CS
IPR001356   Homeobox_dom

SUPFAM

SSF46689 SSF46689

CDD

cd00086 homeodomain

ProteinModelPortal

H9JPA2 A0A2H1VWW4 A0A2W1BJ86 A0A194RJ18 A0A194PU78 A0A3S2LDU4 + More
A0A212EWT5 A0A139WGR6 U4UJU8 N6U7L1 A0A3Q3BWD5 A0A3B4FJU1 A0A3Q4MIH7 A0A3P8QBI1 A0A3P9D965

KEGG

101737650 no KO assigned | (RefSeq) homeobox protein DBX1-B

GO

GO:0006355 GO:0043565 GO:0005634 GO:0003677 GO:0006357

Subcellular location

Nucleus

Length:

106

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.71778

inside

1 - 106

Pi

193.989199

Theta

162.695987

Tajima's D

1.000847

CLR

0.565103

CSRT

0.657517124143793

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics