Gene

KWMTBOMO14018

Pre Gene Modal

BGIBMGA011251

Annotation

sid-1-like_protein2_[Bombyx_mori]

Location

Bomo_Chr23(-):16041354-16056008      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.893

CDS

ATGCTGGTCCAGACCCCGGTAACCACGGAACAGTTCACTAGCATATCCAGAACCCTCTGCCCTCACAACAACATGTTCGATGAAGACGCCGAGGCCTGTGATGCACCCTCCCTGAACACGCCTATAGTCCATCTGACGTCGTCCTCGTCAGAACAGTTGAAAGTCACCATTTTAGTGGAAAAAGTCCAAGATTTCTACATTAAAATCAATCAGACCATCAACATAACGGTCTCGCCGAGCCAGCCTAAATACTACTTCTATCCATTCAAAAAGGGCTCAGGGAAAACGGTGGATTTTGACGAGCAGAAAATGCGTAAGGAGTACATCTGTGGCGCGAGTGGTGGGAGGGGGCATGGCGAGGTGCAGAGGAACGAGGTTGGGTACGGGTGGCTCTCCCGACCCGAGAACGTCATAGTCATGATCGAATCCGACGACGAGCTTTGCGCTGTCGTCTCCATACAGAACTTCTCGTGTCCCGTGTTCGACAACGAACGCGACATACTGTACGACGGGTACTATTTAACTATGACGAGACGAGGAGGGATCACGCTCACTCAAGACACGTTTCCGATCGGCTTCTACATAGTGTTCATAGTCAAAACATCGGACGAGGATTGCAAGGAGCCGGGGACCAATGGGTCCGTGCCCGCCGTGGCGCGTCTGCTGGGCTGGGGGGACAACATCCAAGTCAGTAGCACGGAGGGTCGGGTCAAGAATTTTAGGTTCAAGATCGTGGAGACGATATCGTACAGAGAGTACTTGATAGCCGCCGGGGCCACTGTGCTATTCTACGCCTCCTTCTACCTGGCCTTCTTCGTCTTCGTGCTCTACCAAAGCAGAAAGTCCACGGGAGTGGAGCACCAGGACCAGGAGACTATAGTGAGGTCTTCACACGGCAGTGAGGGGCAGAGCTCCGGAGAGGGACCGTCCCTCCCGCGGCCCACGGATGGAAGCTCCGTCGATTCTCAGTCAGACACGGAGTCGGAGTACTCGACGCTGGACGACGTGACCACGGACAAGGAGCTGTACCGATACGGCACGAAGCTGTGCCTGGCCGACCTGTCTAGGTGCCGCGCCCGGGTGCTCGCCACGCGCTCCAACCGGTACCTGTGGACCGTGCTCACCGTCTCCGTGTTCTACACGCTGCCCGTGCTGCAGCTGGTGGTCACCTACCAACGGCTCCTAAACCAGTCCGGGAACCAGGACCTGTGCTACTTCAACTTCTTCTGCGCACATCCGCTGATGATGCTGTCCGACTTTAACCACGTGTTCTCGAATCTGGGCTACGTGGTGCTTGGGGCTCTGTTCCTGCTGCAGGTCTGGAGGAGGCAGAGGATCATGAGAAACGAACCAGAGGAAAAGAAACAGAAAGGCATCCCCCAGCACTTCGGGCTGCTGTACGCGATGGGCGTCGCCCTGATTAGCGAGGGCTTTCTGTCGGCTGCCTACCACGTCTGCCCCAACAGCATGAACTTCCAGTTCGACACGTCGTTCATGTACGTGACGTCAGCGCTCTGCATGGTGAAGATCTACCAGTCTCGGCACCCCGACATCAACGCAAGAGCACACGCCACTTTCGGGGTCCTGGCGCTCATCATATTTATAGGTCTGGTGGGTGTGCTCAACGCGAACGTTTACTTCTGGGTGGCCTTCACCGCGCTACACCTCCTCACCTGCTTCTTCATTACCTTCCAAATATACTACCTGGGCAGGTTTAAGCTGGACATGGGGTGGGTGAGGGCCGCGAGCCGGGGGGCCGCCCTCCGCCCCTCGCGCGGTCTCATGCTGCTGCTCGCCAACCTGATCAACTGGGGGCTGGCGGGATACGGGGTAGCGCAGCACTCGCGGGACTTCGCCTCCCACCTCCTGCTCGTGCTGATGACCAACCTGTTCCTGTACACGCTGTTCTACATCGTGATGAAGCTGCTGCACCGGGAGACCATCACCTGCTACACGTGGGTGTTCATAGTCCTGACGTACTCGAGCTGGGCCGGGTCTAGCTACTTCTACCTGGACCAGAACACCAATTGGGCGCTCAGCCCGGCGCAGTCCCGGGAGCGCAACGCGGCGTGCAGCGTGCTGCGACTGTTCGACGCGCACGACGCTTGGCACGCGATGTCCGCCGTCGCCATGTTCCTTTCCTTCAACATGTACCTCACGCTGGACGATGGGCTGGCCGGAGCCGACCGCGCGCGCGTTCCCGTGTTCTGA

Protein

MLVQTPVTTEQFTSISRTLCPHNNMFDEDAEACDAPSLNTPIVHLTSSSSEQLKVTILVEKVQDFYIKINQTINITVSPSQPKYYFYPFKKGSGKTVDFDEQKMRKEYICGASGGRGHGEVQRNEVGYGWLSRPENVIVMIESDDELCAVVSIQNFSCPVFDNERDILYDGYYLTMTRRGGITLTQDTFPIGFYIVFIVKTSDEDCKEPGTNGSVPAVARLLGWGDNIQVSSTEGRVKNFRFKIVETISYREYLIAAGATVLFYASFYLAFFVFVLYQSRKSTGVEHQDQETIVRSSHGSEGQSSGEGPSLPRPTDGSSVDSQSDTESEYSTLDDVTTDKELYRYGTKLCLADLSRCRARVLATRSNRYLWTVLTVSVFYTLPVLQLVVTYQRLLNQSGNQDLCYFNFFCAHPLMMLSDFNHVFSNLGYVVLGALFLLQVWRRQRIMRNEPEEKKQKGIPQHFGLLYAMGVALISEGFLSAAYHVCPNSMNFQFDTSFMYVTSALCMVKIYQSRHPDINARAHATFGVLALIIFIGLVGVLNANVYFWVAFTALHLLTCFFITFQIYYLGRFKLDMGWVRAASRGAALRPSRGLMLLLANLINWGLAGYGVAQHSRDFASHLLLVLMTNLFLYTLFYIVMKLLHRETITCYTWVFIVLTYSSWAGSSYFYLDQNTNWALSPAQSRERNAACSVLRLFDAHDAWHAMSAVAMFLSFNMYLTLDDGLAGADRARVPVF

Uniprot

A9CQL3   H9JNZ7   A0A3S2M533   V9VLL3   A0A2A4IUB4   A0A194PSM1   + More
A0A212EWM8   A0A2W1BCY1   A0A0N1I3U4   A0A194PYX2   V9VIE0   A0A1W4WGG4   A0A067R6J9   A0A194RII4   A0A2J7RDJ6   A0A2J7RDJ2   A0A2J7RDK3   X2J861   K9LY69   A0A1Y1KTV8   A0A195E268   D2A688   A0A195D4C4   A0A158NHH5   A9CQK8   A0A151XFE4   A0A3L8DPV3   A7YFW2   F4WVP0   A0A1E1VYU1   A0A0N9JWV7   E2B9B2   A0A026WB92   A0A088AD51   A0A232EXE9   A0A0L7QWU5   E0VXD3   U4U416   A0A0P5CVW6   A0A0N8BIT8   A0A0P5MM69   A0A0P6EGL7   A0A0N8ERB7   A0A0P6EVM5   A0A0N8C2G0   N6TBL6   A0A0N8BX92   A0A0N8CLE5   A0A0P6G2C9   A0A0P6GXX9   A0A0P5IHR2   A0A0P6DLZ4   A0A0P6G2A2   A0A0P6J0Q0   A0A1D2M1A9   A0A0P5Q6K4   A0A0P5P9N0   A0A2R2MIB4   A0A0P5PE63   A0A1B6JLN8   A0A1S3D562   A0A343U6Z3   A0A0P5EPL1   A0A0P5HBY1   A0A0P6ITT7   A0A0P5S1J9   A0A154PER2   A0A0P5NAM2   A0A0P6IH87   A0A0P5VBA3   A0A0P4ZBP9   A0A0P6BDM9   A0A0P5MSQ1   A0A0P6IKU6   A0A0P5HRD5   A0A059TD68   A0A0P5V545   A0A0P5R7U4   A0A0P5REJ7   A0A0P5V5S3   A0A0P6BS31   A0A0P5HC25   A0A0N8CCE1   A0A0P6G2A4   A0A0P5HH08   A0A0P4YM49   A0A0P5B8N0   A0A0P5U391   A0A0N8ECR5   A0A0P5ID48   A0A0P5G7B5   A0A0P5RQE3   A0A0P6GPB8   A0A0P5SBY3   A0A0P6BIW4   A0A2R2MI98  

Pubmed

18201385    19121390    26354079    22118469    28756777    24845553    + More
24528536    28004739    18362917    19820115    21347285    30249741    21719571    20798317    24508170    28648823    20566863    23537049    27289101    24391810   

EMBL

AB327185    BAF95807.1    BABH01009712    RSAL01000031    RVE51591.1    KF717088    + More
AHC98013.1    NWSH01007994    PCG62730.1    KQ459593    KPI96307.1    AGBW02011924    OWR45910.1    KZ150361    PZC71187.1    KQ458887    KPJ04577.1    KPI96355.1    KF717089    AHC98014.1    KK852663    KDR19041.1    KQ460152    KPJ17372.1    NEVH01005288    PNF38902.1    PNF38907.1    PNF38905.1    KJ135007    AHN55087.1    JN676095    AFQ00936.1    GEZM01078212    GEZM01078211    JAV62846.1    KQ979763    KYN19245.1    KQ971346    EFA05674.2    KQ976870    KYN07738.1    ADTU01015824    AB327183    BAF95805.1    KQ982194    KYQ59051.1    QOIP01000005    RLU22272.1    EF688529    ABU63674.1    GL888393    EGI61710.1    GDQN01011200    JAT79854.1    KR153285    ALG36907.1    GL446479    EFN87718.1    KK107293    EZA53362.1    NNAY01001757    OXU23015.1    KQ414706    KOC63087.1    DS235830    EEB18039.1    KB632001    ERL87797.1    GDIP01164774    JAJ58628.1    GDIQ01173555    JAK78170.1    GDIQ01154615    JAK97110.1    GDIQ01075641    JAN19096.1    GDIQ01001532    JAN93205.1    GDIQ01057399    JAN37338.1    GDIQ01121379    JAL30347.1    APGK01036719    APGK01036720    APGK01036721    KB740941    ENN77664.1    GDIQ01135923    JAL15803.1    GDIP01120287    JAL83427.1    GDIQ01039552    JAN55185.1    GDIQ01039551    JAN55186.1    GDIQ01214145    JAK37580.1    GDIQ01075640    JAN19097.1    GDIQ01039550    JAN55187.1    GDIQ01001530    JAN93207.1    LJIJ01007384    ODM86750.1    GDIQ01121377    JAL30349.1    GDIQ01135922    JAL15804.1    GDIQ01135920    JAL15806.1    GECU01007611    JAT00096.1    KY284073    AUZ94236.1    GDIQ01267009    JAJ84715.1    GDIQ01229796    JAK21929.1    GDIQ01001531    JAN93206.1    GDIQ01093532    JAL58194.1    KQ434889    KZC10355.1    GDIQ01151765    JAK99960.1    GDIQ01022015    JAN72722.1    GDIP01104586    JAL99128.1    GDIP01215517    JAJ07885.1    GDIP01017762    JAM85953.1    GDIQ01151764    JAK99961.1    GDIQ01002823    JAN91914.1    GDIQ01229793    JAK21932.1    KF192314    AHY18684.1    GDIP01120292    JAL83422.1    GDIQ01106429    JAL45297.1    GDIQ01121378    JAL30348.1    GDIP01104590    JAL99124.1    GDIP01017763    JAM85952.1    GDIQ01229791    JAK21934.1    GDIQ01093531    JAL58195.1    GDIQ01039549    JAN55188.1    GDIQ01229792    JAK21933.1    GDIP01225325    JAI98076.1    GDIP01187920    JAJ35482.1    GDIP01120282    JAL83432.1    GDIQ01039548    JAN55189.1    GDIQ01214144    JAK37581.1    GDIQ01267006    JAJ84718.1    GDIQ01106431    JAL45295.1    GDIQ01108725    GDIQ01030617    JAN64120.1    GDIQ01106430    JAL45296.1    GDIP01028443    JAM75272.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000192223    + More
UP000027135    UP000053240    UP000235965    UP000078492    UP000007266    UP000078542    UP000005205    UP000075809    UP000279307    UP000007755    UP000008237    UP000053097    UP000005203    UP000215335    UP000053825    UP000009046    UP000030742    UP000019118    UP000094527    UP000085678    UP000079169    UP000076502   

PRIDE

A9CQL3    H9JNZ7    A9CQK8   

Pfam

PF13965   SID-1_RNA_chan

Interpro

IPR025958   SID1_TM_fam       

ProteinModelPortal

A9CQL3   H9JNZ7   A0A3S2M533   V9VLL3   A0A2A4IUB4   A0A194PSM1   + More
A0A212EWM8   A0A2W1BCY1   A0A0N1I3U4   A0A194PYX2   V9VIE0   A0A1W4WGG4   A0A067R6J9   A0A194RII4   A0A2J7RDJ6   A0A2J7RDJ2   A0A2J7RDK3   X2J861   K9LY69   A0A1Y1KTV8   A0A195E268   D2A688   A0A195D4C4   A0A158NHH5   A9CQK8   A0A151XFE4   A0A3L8DPV3   A7YFW2   F4WVP0   A0A1E1VYU1   A0A0N9JWV7   E2B9B2   A0A026WB92   A0A088AD51   A0A232EXE9   A0A0L7QWU5   E0VXD3   U4U416   A0A0P5CVW6   A0A0N8BIT8   A0A0P5MM69   A0A0P6EGL7   A0A0N8ERB7   A0A0P6EVM5   A0A0N8C2G0   N6TBL6   A0A0N8BX92   A0A0N8CLE5   A0A0P6G2C9   A0A0P6GXX9   A0A0P5IHR2   A0A0P6DLZ4   A0A0P6G2A2   A0A0P6J0Q0   A0A1D2M1A9   A0A0P5Q6K4   A0A0P5P9N0   A0A2R2MIB4   A0A0P5PE63   A0A1B6JLN8   A0A1S3D562   A0A343U6Z3   A0A0P5EPL1   A0A0P5HBY1   A0A0P6ITT7   A0A0P5S1J9   A0A154PER2   A0A0P5NAM2   A0A0P6IH87   A0A0P5VBA3   A0A0P4ZBP9   A0A0P6BDM9   A0A0P5MSQ1   A0A0P6IKU6   A0A0P5HRD5   A0A059TD68   A0A0P5V545   A0A0P5R7U4   A0A0P5REJ7   A0A0P5V5S3   A0A0P6BS31   A0A0P5HC25   A0A0N8CCE1   A0A0P6G2A4   A0A0P5HH08   A0A0P4YM49   A0A0P5B8N0   A0A0P5U391   A0A0N8ECR5   A0A0P5ID48   A0A0P5G7B5   A0A0P5RQE3   A0A0P6GPB8   A0A0P5SBY3   A0A0P6BIW4   A0A2R2MI98  

KEGG

100134918    no KO assigned | (RefSeq) Sir-2; sid-1-related gene2

GO

GO:0016021   GO:0051033   GO:0033227   GO:0005764   GO:0005886   GO:0003725   GO:0050658   GO:0006606   GO:0008565   GO:0005488   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR12185  

Length:

736

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

227.19424

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07929

outside

1  -  252

TMhelix

253  -  275

inside

276  -  368

TMhelix

369  -  391

outside

392  -  421

TMhelix

422  -  441

inside

442  -  461

TMhelix

462  -  484

outside

485  -  493

TMhelix

494  -  511

inside

512  -  523

TMhelix

524  -  543

outside

544  -  547

TMhelix

548  -  570

inside

571  -  590

TMhelix

591  -  613

outside

614  -  617

TMhelix

618  -  640

inside

641  -  646

TMhelix

647  -  669

outside

670  -  701

TMhelix

702  -  721

inside

722  -  736

 

 

Pi

217.056077

Theta

188.980968

Tajima's D

-1.179645

CLR

178.343537

CSRT

0.107444627768612

Interpretation

Uncertain