SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14016
Pre Gene Modal
BGIBMGA011352
Annotation
PREDICTED:_uncharacterized_protein_LOC101735757_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.439
 

Sequence

CDS
ATGGTTTTCTTGCGACCAACGAACATGGCCTACCCAGCCATCTGGCGCAGGTTCACCGTCAGACGCGACGGGGTTACCACACTCCTCCGCATCCAAGATCTAACGGAGGACTTGCGTGGCGCTGCGTTGGCGCTAATGGAGAAATACTTCATGAGTGATGAGCCCCCCTGTAAATTTATAGGTATTCACAACCACCCTCGAGCTGTGGCGGAACTGAAGAGTCTCTGGAGCAAGTCGGTTAAGGACAATCTGTCTCTAGTCTGCGTGAAGGACAACGATGACAGTGACCCGACCGTGGTGGGAGTGAATGTCCTGACCGTGGTCTCTAAAGCAGACAAGGAGGAAGTCTTTCAGTCGGACGACAAGGTCTGGTCCATGCTGTTTGGAGCCGTGGATTTAGTGGCCAGGAGCGTGAATATCTTCGAGAAGTACGACGTGGACAAATACTTGACTGCGTACGGACTGGTCGTGGATCCTGAATGGAGGGGCCTGAATATCGGAAAAGAATTGTTGGAGACGAGGATCCCTCTATGCAGAGCCATAGGGGTGAAAGTGACAGCCACCGTATTCACTGCTGGAGCTTCTCAAGCCGTAGCTAAGAAAGCTGGTTTCGAAGTCTTATTCGAAATAACATACGAAGAACTAGCCAAGAAAGGCTTCGTATTTCCGGGGATTGAAAAAGACACGAAATCTTCCAAGCTGATGGCTCTCATGATTGATTAG
Protein
MVFLRPTNMAYPAIWRRFTVRRDGVTTLLRIQDLTEDLRGAALALMEKYFMSDEPPCKFIGIHNHPRAVAELKSLWSKSVKDNLSLVCVKDNDDSDPTVVGVNVLTVVSKADKEEVFQSDDKVWSMLFGAVDLVARSVNIFEKYDVDKYLTAYGLVVDPEWRGLNIGKELLETRIPLCRAIGVKVTATVFTAGASQAVAKKAGFEVLFEITYEELAKKGFVFPGIEKDTKSSKLMALMID

Summary

EMBL
BABH01009708    NWSH01000987    PCG73230.1    ODYU01010443    SOQ55559.1    KQ460152    + More
KPJ17439.1    KQ459593    KPI96304.1    AGBW02011924    OWR45904.1    APCN01005402    AAAB01008898    EAA09295.2    AXCM01000548    UFQS01000047    UFQT01000047    SSW98552.1    SSX18938.1    AXCN02001202    GGFK01007654    MBW40975.1    GGFK01009995    MBW43316.1    AJVK01017491    DS231819    EDS42757.1    KZ149971    PZC76069.1    GFDL01006493    JAV28552.1    GGFK01012558    MBW45879.1    EDS42758.1    GAPW01003872    JAC09726.1    ATLV01026931    KE525420    KFB53668.1    GAPW01003862    JAC09736.1    DQ440198    ABF18231.1    JXUM01114724    JXUM01114725    KQ565812    KXJ70646.1    CH477937    EAT34939.1    JXUM01114723    KXJ70644.1    EAT34938.1    EAT34935.1    DQ440432    ABF18465.1    GFDF01010634    JAV03450.1    EAT34934.1    GGFJ01008808    MBW57949.1    ADMH02001850    ETN60877.1    EAA09041.4    NWSH01000403    PCG76656.1    GFDL01006313    JAV28732.1    GGFJ01008913    MBW58054.1    GGFJ01008799    MBW57940.1    GGFJ01008912    MBW58053.1    EDS42760.1    UFQT01000017    SSX17868.1    GAPW01003983    JAC09615.1    GBBI01000424    JAC18288.1    GFDL01006289    JAV28756.1    GANO01004974    JAB54897.1    GGFJ01009191    MBW58332.1    EDS42759.1    EDS42755.1    DS232449    EDS41902.1    GBGD01002807    JAC86082.1    GFDL01005460    JAV29585.1    GALA01000894    JAA93958.1    GFTR01003768    JAW12658.1    KXJ70641.1    GANO01004420    JAB55451.1    GEZM01063101    JAV69308.1    GANO01003565    JAB56306.1    SSX17869.1    GEZM01063098    JAV69311.1    JXUM01042501    KQ561327    KXJ78967.1    GFDF01010074    JAV04010.1    GEZM01023729    JAV88211.1    GFDF01010628    JAV03456.1    JXUM01114721    KXJ70640.1    ADMH02000288    ETN67111.1    ACPB03013811    ACPB03013812    GDKW01002539    JAI54056.1    RSAL01000031    RVE51573.1    NEVH01021208    PNF19851.1    EAT34932.1    GFDF01009743    JAV04341.1   
Pfam
PF00583   Acetyltransf_1        + More
PF13516   LRR_6
PF13508   Acetyltransf_7
PF13673   Acetyltransf_10
Interpro
IPR000182   GNAT_dom        + More
IPR016181   Acyl_CoA_acyltransferase       
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
SUPFAM
SSF55729   SSF55729       
Gene 3D
PDB
4FD7     E-value=5.55675e-37,     Score=384

Ontologies

Topology

Length:
240
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.08297
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.04395
outside
1  -  240
 
 

Population Genetic Test Statistics

Pi
248.754287
Theta
169.940704
Tajima's D
0.937169
CLR
0.953475
CSRT
0.634868256587171
Interpretation
Uncertain
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