Gene

KWMTBOMO14014

Pre Gene Modal

BGIBMGA011253

Annotation

PREDICTED:_26S_proteasome_complex_subunit_DSS1_[Plutella_xylostella]

Location

Bomo_Chr23(-):15954854-15956578      View in EpiBrowser

Full name

Actin-related protein 8      

Location in the cell

Nuclear   Reliability : 2.236

CDS

ATGGCTGACAAACAGAAAGTAGACCTTGGTTTGCTAGAAGAGGATGACGAGTTCGAAGAATTTCCCGCGGAAAATTGGGGTACAGAAGACGCTGATGATGAAGATGTATCGGTTTGGGAAGACAACTGGGAAGACGACGTCATCCAAGATGATTTTAATCAGCAGTTGAGGCAACAACTGGAAAAACTGAAGGATCAGAAATCTTAA

Protein

MADKQKVDLGLLEEDDEFEEFPAENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS

Description

Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize.
Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.

Subunit

Component of the chromatin remodeling Ino80 complex. Exists as monomers and dimers, but the dimer is most probably the biologically relevant form required for stable interactions with histones that exploits the twofold symmetry of the nucleosome core.

Similarity

Belongs to the actin family. ARP8 subfamily.

Uniprot

H9JNZ9   A0A3S2PHG7   A0A2A4JNI9   A0A2H1VQ76   A0A2W1B5R8   A0A194PS84   + More
A0A194RJC4   A0A212EWN6   S4PH22   N6ST48   D6WHE9   A0A1W4XHR7   A0A067RHA1   A0A1Q3FE76   A0A182WV10   Q7PS61   A0A182I8N5   B0WT20   A0A2J7PWT5   A0A1S3DBK9   T1DGY9   A0A2T7PQM3   Q17J99   A0A023ED46   A0A182IWT9   A0A182K2Q0   A0A182P2N7   A0A182XX42   A0A182QMA5   T1E8X6   A0A2M3ZAV8   A0A2M4ANF6   A0A2M4C5V9   W5JB26   A0A182F9A7   A0A182RVY7   A0A182W153   A0A182NFY8   A0A2R7VWK9   A0A1B0DLB9   A0A0C9RRF2   A0A1E1WYS7   A0A1L8DSL2   A0A293M336   A0A0K8TPG4   V5I4Z0   B7QKW9   A0A131Y7W2   A0A131YER4   L7M251   A0A131XKW3   A0A087U614   A0A1B0CFG2   A0A3B5AZD4   E9HAR1   A0A2G8L2A0   F7FM90   A0A3M6TLK3   A0A0P6ACR8   A0A0P6GWZ3   V8NWK1   E2RK10   A0A3Q3D759   A0A3Q3EG79   A0A060XIN4   A0A1W7REI8   T1E4M4   A0A0F7Z5M7   A0A0B8RPJ2   U3ERI8   F6NMA4   A0A151MQL7   G1KQ62   A0A1A6GF70   I3MHG4   A0A1U7R086   A0A286XPK7   D3ZHW9   Q3TV35   A0A2K6EC95   A0A2K6MCL8   G1U1K1   G1LV61   G3S3V4   G1S1L9   A0A341D6W6   A0A2K5ZAR8   F2Z5F4   A0A0D9RKP1   G3T9T5   A0A2Y9E2X8   A0A2U3V9X3   A0A2I3MP30   A0A2K5EE89   A0A2Y9T2J4   A0A2K6RAT9   A0A2U3XY50   A0A337S1G4   A0A2K5KTJ0   A0A3P4RW88  

Pubmed

19121390    28756777    26354079    22118469    23622113    23537049    + More
18362917    19820115    24845553    12364791    14747013    17210077    24330624    17510324    24945155    26483478    25244985    20920257    23761445    26131772    28503490    26369729    25765539    26830274    25576852    28049606    21292972    29023486    18464734    30382153    24297900    16341006    24755649    26358130    23758969    25476704    23915248    23594743    22293439    21993624    15057822    15632090    29398115    10349636    11042159    11076861    11217851    12466851    12040188    16141073    20010809    25362486    17975172   

EMBL

BABH01009707    RSAL01000031    RVE51587.1    NWSH01000978    PCG73288.1    ODYU01003796    + More
SOQ43001.1    KZ150299    PZC71542.1    KQ459593    KPI96301.1    KQ460152    KPJ17440.1    AGBW02011924    OWR45902.1    GAIX01005960    JAA86600.1    APGK01057313    KB741280    KB631604    ENN70869.1    ERL84587.1    KQ971321    EFA00655.1    KK852470    KDR23221.1    GFDL01009189    JAV25856.1    AAAB01008844    EAA06113.4    APCN01003090    DS232079    EDS34157.1    NEVH01020869    PNF20791.1    GALA01000002    JAA94850.1    PZQS01000002    PVD35724.1    CH477234    EAT46707.1    JXUM01095178    GAPW01006842    GAPW01006841    KQ564177    JAC06756.1    KXJ72617.1    AXCN02000343    GAMD01002373    JAA99217.1    GGFM01004859    MBW25610.1    GGFK01008966    MBW42287.1    GGFJ01011400    MBW60541.1    ADMH02001636    GGFL01004441    ETN61662.1    MBW68619.1    KK854050    PTY10305.1    AJVK01071098    GBZX01002944    JAG89796.1    GFAC01007023    JAT92165.1    GFDF01004693    JAV09391.1    GFWV01010425    MAA35154.1    GDAI01001321    JAI16282.1    GANP01000810    JAB83658.1    ABJB010256305    DS962443    EEC19491.1    GEFM01001785    JAP74011.1    GEDV01010694    JAP77863.1    GACK01006628    JAA58406.1    GEFH01001781    JAP66800.1    KK118364    KFM72803.1    AJWK01010098    GL732613    EFX71170.1    MRZV01000251    PIK54362.1    RCHS01003372    RMX42317.1    GDIP01031235    JAM72480.1    GDIQ01028243    JAN66494.1    AZIM01001678    ETE66033.1    AAEX03009319    FR905461    CDQ79478.1    GDAY02001895    JAV49537.1    GAAZ01001930    JAA96013.1    GBEX01002654    JAI11906.1    GBSH01002128    GBSH01002117    JAG66909.1    GAEP01001228    GBEW01000758    JAB53593.1    JAI09607.1    CU634012    AKHW03005461    KYO26690.1    LZPO01097125    OBS64876.1    AGTP01068139    AAKN02016906    AAKN02016907    AAKN02016908    AAKN02016909    AABR07072979    CH473959    EDM15031.1    AK160432    AK161690    AK167914    CH466533    BAE35785.1    BAE36534.1    BAE39921.1    EDL13957.1    AAGW02035468    ACTA01050967    ACTA01058967    CABD030053439    CABD030053440    CABD030053441    ADFV01001003    AEMK02000070    AQIB01018663    AHZZ02023056    AANG04003224    CYRY02043418    VCX37798.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000019118    UP000030742    UP000007266    UP000192223    UP000027135    UP000076407    UP000007062    UP000075840    UP000002320    UP000235965    UP000079169    UP000245119    UP000008820    UP000069940    UP000249989    UP000075880    UP000075881    UP000075885    UP000076408    UP000075886    UP000000673    UP000069272    UP000075900    UP000075920    UP000075884    UP000092462    UP000001555    UP000054359    UP000092461    UP000261400    UP000000305    UP000230750    UP000002279    UP000275408    UP000002254    UP000264820    UP000261660    UP000193380    UP000000437    UP000050525    UP000001646    UP000092124    UP000005215    UP000189706    UP000005447    UP000002494    UP000233120    UP000233180    UP000001811    UP000008912    UP000001519    UP000001073    UP000252040    UP000233140    UP000008227    UP000029965    UP000007646    UP000248480    UP000245320    UP000028761    UP000233020    UP000248484    UP000233200    UP000245341    UP000011712    UP000233060   

PRIDE

H9JNZ9    F2Z5F4   

Pfam

PF05160   DSS1_SEM1        + More
PF00022   Actin

Interpro

IPR007834   DSS1_SEM1        + More
IPR004000   Actin       
IPR027668   Arp8/plant_Arp9       

ProteinModelPortal

H9JNZ9   A0A3S2PHG7   A0A2A4JNI9   A0A2H1VQ76   A0A2W1B5R8   A0A194PS84   + More
A0A194RJC4   A0A212EWN6   S4PH22   N6ST48   D6WHE9   A0A1W4XHR7   A0A067RHA1   A0A1Q3FE76   A0A182WV10   Q7PS61   A0A182I8N5   B0WT20   A0A2J7PWT5   A0A1S3DBK9   T1DGY9   A0A2T7PQM3   Q17J99   A0A023ED46   A0A182IWT9   A0A182K2Q0   A0A182P2N7   A0A182XX42   A0A182QMA5   T1E8X6   A0A2M3ZAV8   A0A2M4ANF6   A0A2M4C5V9   W5JB26   A0A182F9A7   A0A182RVY7   A0A182W153   A0A182NFY8   A0A2R7VWK9   A0A1B0DLB9   A0A0C9RRF2   A0A1E1WYS7   A0A1L8DSL2   A0A293M336   A0A0K8TPG4   V5I4Z0   B7QKW9   A0A131Y7W2   A0A131YER4   L7M251   A0A131XKW3   A0A087U614   A0A1B0CFG2   A0A3B5AZD4   E9HAR1   A0A2G8L2A0   F7FM90   A0A3M6TLK3   A0A0P6ACR8   A0A0P6GWZ3   V8NWK1   E2RK10   A0A3Q3D759   A0A3Q3EG79   A0A060XIN4   A0A1W7REI8   T1E4M4   A0A0F7Z5M7   A0A0B8RPJ2   U3ERI8   F6NMA4   A0A151MQL7   G1KQ62   A0A1A6GF70   I3MHG4   A0A1U7R086   A0A286XPK7   D3ZHW9   Q3TV35   A0A2K6EC95   A0A2K6MCL8   G1U1K1   G1LV61   G3S3V4   G1S1L9   A0A341D6W6   A0A2K5ZAR8   F2Z5F4   A0A0D9RKP1   G3T9T5   A0A2Y9E2X8   A0A2U3V9X3   A0A2I3MP30   A0A2K5EE89   A0A2Y9T2J4   A0A2K6RAT9   A0A2U3XY50   A0A337S1G4   A0A2K5KTJ0   A0A3P4RW88  

PDB

6MSK     E-value=0.01871,     Score=82

KEGG

101735482    K10881 26 proteasome complex subunit DSS1 | (RefSeq) 26S proteasome complex subunit DSS1

PATHWAY

03050    Proteasome - Bombyx mori (domestic silkworm)
03440    Homologous recombination - Bombyx mori (domestic silkworm)

GO

GO:0008541   GO:0043248   GO:0006406   GO:0000724   GO:0031011   GO:0006338   GO:0005524   GO:0006281   GO:0006310   GO:0000502   GO:0006606   GO:0008565   GO:0005488   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR16771   PTHR11937   PTHR11937:SF13  

Subcellular location

Nucleus  

Length:

68

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.46735

outside

1  -  68

 

 

Pi

252.941

Theta

197.982363

Tajima's D

0.870725

CLR

0.002861

CSRT

0.628718564071796

Interpretation

Uncertain