Gene
KWMTBOMO14011
Pre Gene Modal
BGIBMGA011350
Annotation
PREDICTED:_scavenger_receptor_class_B_member_1_[Amyelois_transitella]
Location in the cell
Extracellular Reliability : 1.616 PlasmaMembrane Reliability : 2.09
Sequence
CDS
ATGGCCTTCAAAGTCCTAAAGTGCTCCAGCATAAATTCAGATTTGAGCGTGTGTCATCAGTACCTTGTGGGAAATTTGGCTTTCGATCTGAATTTAGATGGTGTCTACCATTCGCAAGCTGGCCCCACTCACACTCACACTCGCACTCACACTGGCACTCACACTCCCACTCACACTCGCACTCGCACTCGCACTCGCACACACACTCGCACTCACACACTCGCACACACACACGCACTCACACTCACACTCGCACACACACTCACACTCGCACATACACACACACTCGCACACACACTCGCACTCACACTCGCACTCGCACTCACACTCGCACTCGCACTCGCACTCACACTGGCACTCGCACTCACACAGGCACTCACACTAGCACTCGCACTCGCACTCGCACTCGCACTCACACTGGCACTCACGCTCCCACTCCCACTCCCACTCGCACTTGCACTCACACTCCCACTCGCACTCGCACTCGCACTCACACTCGCACTCGCACTCGCACTCACACTCGCACTCGCACTCACACTCGCACTCGCACTCGCACTCACACTCACACTCACACTCACACTCGCACTCACACTCAAACTCACACTCGCACTCGCACTCGCACTCGCACTCACACTCGCACTCACACTCGCACTCGCACTCACACTCGCACACACACTCGCACTCACACACTCGCACACACACACGCACTCACACTCACCCTCGCACACACACTCACACGTAGTCCTCGCCTCCCGCGCCTCCCCAACATCCCCAACATACAACAAAAGTGTACGTTTATTTGTTGCAGGTCGCCTGGCGGTTATAATGTTCAGTATATGCACAGTGGTGCTCGGAGTTATCTTATCGTTCGTTCCATGGCTGGACTATATTATATTTAGGGAACTAAAACTGTGGAACGGTTCGATCAGCTACAGCTACTGGCAGAAACCAGGAGTGATGAGGCTGACCAAGGTGTACATCTTCAACGTGACGAACTCGCAGGCGTTCCTCGAGACGGGCGAGAAACCGAAGCTCGTGGAAGTTGGACCGTTCGTGTATCGAGAGGACATGGAGAAGGTGAACATAAAATTCCACGACAACGACACGCTGACCTACCAGCACAACAAAATTTTGAGATTCGTCCCGGAGATGAGCGTCGACAAGAAGCTAAAACTGGTGGTGCCTAATATACCGCTGCTGACAGTCACGTCGTTCTCTCACAACATGGCTCCGTGGCTGTTCAATTTGTTCGTGTCCGGCCTGGCCCTGACCTACAAGGACAGAGCGAAACCCTTCGTCGACGTCACAGCCGAGGAACTGGTCTTCGGCTACAACGACCCGCTCGTCAAATTAGCTCATTACTTCTATCCGAAGGGAAAGAGACCGAACACCCAAATGGGTTTGCTGTTGGCTAGGAACGGTACCTTGGAGGAGGTGTCGACAATATACACAGGACACCAGGGCATGGAGAGGTTTGGATATTTGGACAAAGTGAACGGCCTCGACCACATCCCCCACTGGAAGGACAAGCCGTGCAACAACCTTCGTGCATCGGAGGGCTCCTTCTTTCCTCCTCGCTACGTCACTAAGGAGGACCTAGTCAACGTTTACGACAAGGATCTCTGCAGGATAATGCCCTTGAAATACAGAAAGGATGTATACAAAGATGGCATCCAGACGGGGCTGTACACGCCGCCCAGCTCGACGTTCGAGTGTGCCGCTGTGAACCCGGACAACAAGTGCTACTGCGACGCCGGGGACTGTCCACCGCGAGGCTTACAGAACATCAGTCCGTGTCAGTACAATGCTCCAGTCTACCTGTCGTATCCTCATTTCTACGATGCCGACCCCTCACTCCTGGAGCCGTTCGAAGGTCTAAAACCTGATAAGCAGAAACACGAAACATATTTCATGATCCAACCGAGAATCGGTGTGCCCCTGGAGGGTTTCGTGCGGGTCCAGTTGAACATGAAGGTAGACCGCGCTCCGGGGATCACTGTCAACAACATTGACAAGTTCCCTGACATGATCTTCCCGGTCATGTGGCTCGAGGAAGGTATACCGGAGGTGACGACGCCAATATGGCGTTGGATATATCTGGCCACGACGGTCGGACCGGTAGCCGGACCGGCACTGACATACTCCATGATCGCGGGAGGCCTCTTGACGTTAGCTGTGATCTTCATACGCGCGTACAAGCGCTTCGTATTGGGACAAAACTCGTTAGAAATCATAGACGTGAGCCGCGACACCTTCCGGAGGGGCTCCACGATCATCCTGAGTAGTTCGATATTGTTGCCGACGTCGTACCGACCTTTGAACAAGACGACCAGCTGTAACGAGCTCGTGTATGTCGGCACCCAGGGATAA
Protein
MAFKVLKCSSINSDLSVCHQYLVGNLAFDLNLDGVYHSQAGPTHTHTRTHTGTHTPTHTRTRTRTRTHTRTHTLAHTHALTLTLAHTLTLAHTHTLAHTLALTLALALTLALALALTLALALTQALTLALALALALALTLALTLPLPLPLALALTLPLALALALTLALALALTLALALTLALALALTLTLTLTLALTLKLTLALALALALTLALTLALALTLAHTLALTHSHTHTHSHSPSHTHSHVVLASRASPTSPTYNKSVRLFVAGRLAVIMFSICTVVLGVILSFVPWLDYIIFRELKLWNGSISYSYWQKPGVMRLTKVYIFNVTNSQAFLETGEKPKLVEVGPFVYREDMEKVNIKFHDNDTLTYQHNKILRFVPEMSVDKKLKLVVPNIPLLTVTSFSHNMAPWLFNLFVSGLALTYKDRAKPFVDVTAEELVFGYNDPLVKLAHYFYPKGKRPNTQMGLLLARNGTLEEVSTIYTGHQGMERFGYLDKVNGLDHIPHWKDKPCNNLRASEGSFFPPRYVTKEDLVNVYDKDLCRIMPLKYRKDVYKDGIQTGLYTPPSSTFECAAVNPDNKCYCDAGDCPPRGLQNISPCQYNAPVYLSYPHFYDADPSLLEPFEGLKPDKQKHETYFMIQPRIGVPLEGFVRVQLNMKVDRAPGITVNNIDKFPDMIFPVMWLEEGIPEVTTPIWRWIYLATTVGPVAGPALTYSMIAGGLLTLAVIFIRAYKRFVLGQNSLEIIDVSRDTFRRGSTIILSSSILLPTSYRPLNKTTSCNELVYVGTQG
Summary
Uniprot
ProteinModelPortal
PDB
4F7B
E-value=2.55209e-49,
Score=496
Ontologies
Topology
Length:
789
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
173.64408
Exp number, first 60 AAs:
0.02193
Total prob of N-in:
0.86445
inside
1 - 73
TMhelix
74 - 96
outside
97 - 99
TMhelix
100 - 122
inside
123 - 126
TMhelix
127 - 146
outside
147 - 149
TMhelix
150 - 172
inside
173 - 173
TMhelix
174 - 196
outside
197 - 199
TMhelix
200 - 222
inside
223 - 271
TMhelix
272 - 294
outside
295 - 706
TMhelix
707 - 729
inside
730 - 789
Population Genetic Test Statistics
Pi
215.847491
Theta
183.277923
Tajima's D
0.555202
CLR
0.541013
CSRT
0.527473626318684
Interpretation
Uncertain
