Silkworm Genome Informatics Database

Gene

KWMTBOMO14007

Pre Gene Modal

BGIBMGA011259

Annotation

PREDICTED:_metabotropic_glutamate_receptor_5-like_[Bombyx_mori]

Location

Bomo_Chr23(-):15811750-15818501 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.351

CDS

ATGGTGAGTGCCGGAAACCCAGCGGATGCTAACAAGCTGGACGCCGACGAGTATTTCGTATTGGAGATCGTATTCCGCCGTGTAATGCAGATGACTAAGCAAAATAATGAAAGAGCGCGTACACGTGTTGCAGAGAGCTACGGACAGAGCGGCATGGCGGCGTTCCGAGAGGAAGCGGCGCGGGGCGGCGTGTGCGTGGCGCGGGAGGAGGCCCTGCGAGCCGCCCCGGGTCCGCGGGAGGTGGAGGCGGCGCTGCGTCGGCTCAACGGTGGTCCTCGCGTCGCCGTCTGCTGGTGTGAGGGCCGCACGGCGCGCGCTCTGTTGGACAGCATGGCGCGAGAACCTTATCTGCGATTGAATCTGATCGCCAGCGACGGTTGGGCGGATCGACGCGACGTGGTGGACGGCCTGGAGCCCCATGCTCGAGGCGCCCTGACGCTCCGGATCCGGTCCCCGTACTTACACGACTTCGACGACTATTACCGAACGCTCTCACCTCATACCAACACGAGGAATCCTTGGTTCCGGGAGTTTTGGGAACAAAAATTCAAGTGCTCCTTCAAAGAAAGCAGCGGGCAAGGTGTACGGCTTTGTTCTGGTTCCGAGTCACTGATGCAGAACTACACGCAGGAGCCAAAGCTGGCTCTGGTGGTACGCGGAGTGTACGCTTTGGCACACGCTCTGCACGACATGCGCCAGGCGACGTGCGGGGCCCGGCGTGGCCTCTGCGCTGCTCTGCTGCCGTTCAACGTGTCGCAGTACCAACGACACCTGCAGCGGGTGCGGTTCCGGGCTCCCGACGGAGCCCTCGTCGCATTCGATGACCACGGCGACCCGCTACCCGAACGAGGGCAAGGAGTGCGCGGAGTCTGCTCAGAGCCGTGCGGTGTGGGAGAGTGGGCCCGGGCGGGAGAGGGCAGGGCGCGGTGCTGTTGGACGTGCGTGCCCTGTCCGCCGCTCGCCATTACCGTGCCGCCCCCCGCACCGGGCTGCAAGCCGTGCCTTCCCGGACACCGACCTGACCTGACGCGGACTCGCTGCATACCTTCGCCCGTGGAGTGGAGCGGCGGCGGACGACCTCGAGCTATAGCCACTTTGACCGGTGCCATCGGTTTGATCACGGTCTGCTTCTTCTCTGTCGTGTTATGGCACTACCGTAAAACTCCCGTTGTGAAATCTGCTTCACGAGAGCTGTGCGCGCTCCTGCTCTGCTCTGCGGCCTCGTGTCACGGCGCGGCGCTGGCCGGTGCCATCCGCCCAGCAGGGCTGTCATGCGCGGCGGTTCGACTGGCAGCTCCGGCGCTGGGCGGCGTATATGCTGCGGTGGTGGCTCGCACCATGCGCGTCGCACGTCTGGTAGCAGCGGTCGAAAAACGCCCTGCAGCTCGACCCCGATTGCTCTCGTCCCGCGCTCAGGTGTGGACGTGGTTGGCCCTAAGCACGCCGGGCTGGGCGATGGCGGCGTGGAGCGCCACCAGTTGGCCTCCCGTGGCGCGGCTGTTGCACCCGGGCCGGGCGCGCTCCGTGCTGGCTTGCGCAGGAGAGACCGCGACGGCCCAGCTGGTCCCTTTGGCACCGGCCCTAGTGTTGCTCGGTGCGTGCGTGTTGCTGGCAGTGCGCACGCGCCGCCTGCCGCATAACTTAAACGAGACTAAGTTCGTGGGGGCGGCTGCGTACGCGACCTGCGTGACGTGGCTGGCGTTTTTCCCGCTGTACGCAGTGACGGAGGCGCGCACGGCGTGCCTGTGTGCGTGCGTGTCGCTGTCGGCAGGGGCGTGCGTTCTATTGTCCCTGGGCCCGAGGGTCTGGGTGTGCTTATGCCGTCCCGAACGCAACACACGCGCTCACTTTCTGACCGCCACTTCGATCCGTTGTCACCTCGGCAAGTACCGCTCTGGGAGAGCCGCCCGCCCGTCGGCGACCGTCGGCGAGAGTCGGGAGGCGTCCAGTCAGACGACGGAGTGCGGGGAGTGCGGAGAGTGCGGGGCAGCGGGGCGGTGTGCGCGTGTCACACGCTGGGAAGGTCCGGAGTCTGCACACGTGCTCATCGTGCTGTACCCTCACCGACACGTGGCGCCCCTCTCTGGCGGCGCCATGTTCGCCGCGGCGGTCGCGTGCTGGCTCGGAGCCGTCGCTGCGCTGCAAGTGCAGATAGGTGTAGTGGAGCAGCAGCCCATGCTGGCGCAGCAGCTTGCGGTGAGCGCGGAGACAGCGCTGTTGGAGCTGCGGGACGAACCCAGAGTGAAGGTGGCGCCCGTGGAGCCCGAGGAGCCATTAGCATTGGCAGCTCACTTGTGCGCGCTGGCGGAGGAGGGCGTGGCGGCCGTGCTGACGGGTGGAACGGCGCGCTCTGCCAGGCTGTTGGCGGCAGCGGCCGCAAGGGCCGGCGTGCCACTGCTGCTGGCCGATTCTGCTCCCAAGAACCACACCTGGGAAGTGCTAGCCCTTTACCCGGATAACAGAGTACTGGCACAGGCTTGTGCGGATCTGTGCAAGGAGAAGGGCTGGAAACGAGCGGTGTTTTTGCACGCGGGAGAAGCTGAGGTCGCAGCGCTGATCGCGCCTGATGCAGAGCCCCTGGCCTTGGTGGTGCGCCACCTGCCCCCACCGGACGACGCTGCGCTACTCAGAAATTTAATGCTCGTACTCAAGAAATTGAGCGTCACCAACTTCATAGTGTGGTGTGACGCAGAATGTAGTCTGCGCGTACTGGACGTGGCGCAGCGAGTTGGCCTGCTCTCCGACCGACACTCCTACATCATGCTGTCGCTGGACTTGCATACGCAGCCCCTAGCCGACTACAGTCACGGCGGAGCAAACATCACCGCGCTGCGGCTGTTCGAGCCGCAGTCCAAGGACGTTCAGCACATGATGACGTTGTGGGAGAGGCAGTACGGAGCGCGGCTCGGCGACGAGGCCTCGCTCGCGGGACCGGAGCGCTCAGTGCCGACGGCGCTGCCGCTGGCGTACCAGGCCTCGTCGCTGGTGGCGAAGGCGCTGCGAGCCCTGAACCTGCCCCCTGGAGCGCCTGCCTCGTGCCAGGTCGGACTCGGTGCCTTTCACGCTGACACGCTCCTCAACTATCTGCGTTCGGAGGAATGGACGAGCGGAAGTGGCATGGGCGGCGAATTGTCGTGGGAAGTGGACGGATGGCGGCACGAGGTGCAGCTGCAAGTGGCGGAGCTGGCGCGGGGCGGGTGGCTGGAGCCGGCGGGGCTGTGGGCGCCTCGTGTAGGTGTCACATGGCAGCGACCCGACGAGCCGAGGAACTCCATGCCGGACTACTCCATGACCAATCGCACTTTCACCTTCCTTATCGCACGAATCAAGCCGTATATAATGCGACAAGAGTCGACGCTTCGTCTGGCTGGTAACGCGCAGTATGAAGGGTTCTGCATCGAGCTGATTGAGAAACTGGCCGCGATGTTGAAATTCAACTACACGTTCGTGGAGCAAGAAGACGGAGAGTATGGGATCTACAACAACACCCTCGGCAAGTGGACCGGCATGCTCGGGCGCCTCATCGAGGACAAGGACATTGACTTTGCCATAACGGACCTAACCATCACGTCGGAGCGCGAGAAGGCCGTGGACTTCACGACGCCCTTCATGAACCTGGGCATCTCGATCCTGTTCGGCACGCCGGAGCCTGCGCCGCCCAAGCTTTTCGCCTTCATGCTGCCCTTCTCCAACGCGGTTTGGATCTGCCTGGGGTTCGCATATTTGGGCACATCGTTGGTGCTATACGTGGTGGGGCGTTTATGTCATGAGGAGTGGCAGAACCCGTATCCATGCATCGAAGATCCTCCCGCTCTGGAGAACCAGTTTACTCTTGCCAACGCGCTCTGGTTTAACCTCGGCGCTGTGCTGCTGCAGGGCTCTGAGATCGCACCGGTGGCGTACGGGACCCGCGCGGTGGCCAGCGTGTGGTGGCTGTTCGCGCTGGTGATCACGAGCTCCTACACCGCGAACCTGGCTACGCTGCTCGCCTCGAAGAGTTCTACCGACCTCATTCACAATGTGGAGGAGCTTGCCAATAACAACCTCGGCATCAAGTACGGCGCTAAGAAGGGCGGCTCCACCTATAACTTTTTTAAGGTCAAAACTACTTTATCCCACTTTTTCACACCCTGTATATATGTATATTTAAGTCTTTGTCGTAGCTGTAGAGCGTCCATTGCCCAGTAA

Protein

MVSAGNPADANKLDADEYFVLEIVFRRVMQMTKQNNERARTRVAESYGQSGMAAFREEAARGGVCVAREEALRAAPGPREVEAALRRLNGGPRVAVCWCEGRTARALLDSMAREPYLRLNLIASDGWADRRDVVDGLEPHARGALTLRIRSPYLHDFDDYYRTLSPHTNTRNPWFREFWEQKFKCSFKESSGQGVRLCSGSESLMQNYTQEPKLALVVRGVYALAHALHDMRQATCGARRGLCAALLPFNVSQYQRHLQRVRFRAPDGALVAFDDHGDPLPERGQGVRGVCSEPCGVGEWARAGEGRARCCWTCVPCPPLAITVPPPAPGCKPCLPGHRPDLTRTRCIPSPVEWSGGGRPRAIATLTGAIGLITVCFFSVVLWHYRKTPVVKSASRELCALLLCSAASCHGAALAGAIRPAGLSCAAVRLAAPALGGVYAAVVARTMRVARLVAAVEKRPAARPRLLSSRAQVWTWLALSTPGWAMAAWSATSWPPVARLLHPGRARSVLACAGETATAQLVPLAPALVLLGACVLLAVRTRRLPHNLNETKFVGAAAYATCVTWLAFFPLYAVTEARTACLCACVSLSAGACVLLSLGPRVWVCLCRPERNTRAHFLTATSIRCHLGKYRSGRAARPSATVGESREASSQTTECGECGECGAAGRCARVTRWEGPESAHVLIVLYPHRHVAPLSGGAMFAAAVACWLGAVAALQVQIGVVEQQPMLAQQLAVSAETALLELRDEPRVKVAPVEPEEPLALAAHLCALAEEGVAAVLTGGTARSARLLAAAAARAGVPLLLADSAPKNHTWEVLALYPDNRVLAQACADLCKEKGWKRAVFLHAGEAEVAALIAPDAEPLALVVRHLPPPDDAALLRNLMLVLKKLSVTNFIVWCDAECSLRVLDVAQRVGLLSDRHSYIMLSLDLHTQPLADYSHGGANITALRLFEPQSKDVQHMMTLWERQYGARLGDEASLAGPERSVPTALPLAYQASSLVAKALRALNLPPGAPASCQVGLGAFHADTLLNYLRSEEWTSGSGMGGELSWEVDGWRHEVQLQVAELARGGWLEPAGLWAPRVGVTWQRPDEPRNSMPDYSMTNRTFTFLIARIKPYIMRQESTLRLAGNAQYEGFCIELIEKLAAMLKFNYTFVEQEDGEYGIYNNTLGKWTGMLGRLIEDKDIDFAITDLTITSEREKAVDFTTPFMNLGISILFGTPEPAPPKLFAFMLPFSNAVWICLGFAYLGTSLVLYVVGRLCHEEWQNPYPCIEDPPALENQFTLANALWFNLGAVLLQGSEIAPVAYGTRAVASVWWLFALVITSSYTANLATLLASKSSTDLIHNVEELANNNLGIKYGAKKGGSTYNFFKVKTTLSHFFTPCIYVYLSLCRSCRASIAQ

Uniprot

NA

ProteinModelPortal

NA

PDB

5KUF E-value=1.65144e-82, Score=785

KEGG

105841247 no KO assigned | (RefSeq) glutamate receptor ionotropic, kainate 2-like

GO

GO:0004970 GO:0005234 GO:0016020 GO:0004930 GO:0007186 GO:0016021 GO:0004713 GO:0016491 GO:0015930

Length:

1395

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

230.547150000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00147

outside

1 - 362

TMhelix

363 - 385

inside

386 - 397

TMhelix

398 - 420

outside

421 - 429

TMhelix

430 - 452

inside

453 - 472

TMhelix

473 - 495

outside

496 - 516

TMhelix

517 - 539

inside

540 - 551

TMhelix

552 - 574

outside

575 - 1229

TMhelix

1230 - 1252

inside

1253 - 1308

TMhelix

1309 - 1331

outside

1332 - 1368

TMhelix

1369 - 1386

inside

1387 - 1395

Pi

180.722881

Theta

196.913784

Tajima's D

-0.596054

CLR

104.98012

CSRT

0.216339183040848

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics