Gene

KWMTBOMO14005

Pre Gene Modal

BGIBMGA011261

Annotation

PREDICTED:_major_facilitator_superfamily_domain-containing_protein_6-A_[Amyelois_transitella]

Location

Bomo_Chr23(-):15797298-15803731      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.493

CDS

ATGGAGCCGCCCGCCAGCCGCCCGCTCGTCAACCCTGACGAGCACGGCGAAGTCGATACCTCCAGATACCCGGCTCCAAAAGATGCAACCCACAAGGTCCGCGGTCGCAGCGACCTGCTGGAGCTCATGTGCGGCGCCGGCGCGGTCGACCCTGAGCTCCTCACCGTCAAGACTTTCTACTTCTTCTTCTACTCGGCGTTCGGCTCCTTGTTCCCCTTGATGGGCATCTACTTCAAGCAGATGGGTATGAACGCGGGCCAGTGCGGCCTGCTCATTGGAACTCGCCCTTTTGTGGAGTTTCTGTCGGCTCCATTCTGGGGCAGTCTCGCAGACCGCTGGCGTAAAGGACGTACGCTGCTACTGGCCTCTCTCAGTGCTTGGATCATCTTTACGCTGCCTTTGAGCTGGGTGCAACCGGCGCCTGTGTCGTGCGTGCTTCCCATTAACTCGACCGCCTACAACCTGACCGACCCCAGGTACGACGAGGACTGGACCACCCCGCCGCGCTCGTTCCGCGTCTCCGCCGACAAGGGGTCGCCTCTGCCGGTCAGCGACGCTCTCAACTATGACTCCAAGGCGAACGGAGACTGGGTGACACCGCTGCATTCCTTCATTGTATATCGAACCCCGGACATTCAAAAGACATTCTTTCTGCTGTTATTGCTGGTCGTGATCGGCGAGTTCTTCAGTGCACCCGCCATCACACTCGCTGACTCCGCCGTTATCACCTTGCTTGGAGAGGACGCTGACAGGTACGGACACCAGCGTATGTTTGGCTCGCTGGGCTGGGGGCTGGCGATGTTCTTCGTCGGCATAGCGCTGGACCACAGCACGTCATTCAGTTCTCATCCTTGCGGAGGTCCACAACGTTACGAAAAGAATTACACGATCTGTTTCGCGACCTTCTCCGTGCTCATGGGGGCCGCCCTCATCACTGCCACGCAGATAAGATTCAAGTATGAGTTCGTTAGTGAGGAGCTTGCCCCTCCTCCGCCCCCTTCTGAGCCAACACACGAGGAGAAGATGCAGCAACAACTCGCGCAACAACTACAGCTGCCCGGCCTGGACACCAGCGCGCCGCCTCCGCGACAACCCGACCTCGAACACGCCAAGGTCTTCGCACAGACAACACGCGAGATGCCGGAGTGGGTAACGGTGCTGCGTCAGTTCCAGAACGTGAAGGCGGCTTCGTTCCTGTTCGTGGCTTGGTTCATGGGCTTCGGTATCGGCTTGATCTTCACCTTCCTCTTCTGGCATCTTCAGGACATCAATGGCTCTCCCACTCTCTACGGGGTTGCATCTGTGATTAACCACATCTCGGAAATATTCGCGTACTTCTTCAGCTTCAAGCTCATCACACAAATGGGACACGTAAAGGTGCTGTGCTTGGGTCTGGCGGGAAACGTGCTGCGGTTCCTGTACATCTCATGGCTCTCGGACCCATGGTGGGTGCTGCCCTTCGAGTTCGTCCAGGGAGTGACGCACGCGGCCGTGTGGGCGGCCTGCTGCTCCTACATCGCTCAGAGAGCCCCGCCCGGTCTGCGCTCGTCCGCACAAGGCGTACTCCAAGGACTCCATCACGGACTGGGGCGCGGGTGCGGGGCGGTGCTGGGCGGGATCGCGGTCGCCAAGTGGGGCACAACGAGCACGTTCGCCGGCTACGGAATACTGTGCGCGGTGGTGCTTGCCGTCTTCGCCTTCATCAACTTCCGCGGGGGCGAGGAGCCGGACACGGGCGGCGCAGGAGAGGAAGAGGTCCGCGCCGTGGCGGAGGTGGGAGTACTGGCGCCGCACGGGGTGCCCTCCAATCCGCTACCCCGCGCGCTCTCATCGACGCGGCTGGCGGACCTGGCGCACCACGACTCTTACGGCGCCACCAACTCGCACGCCGGCGCTGACAGCCTGTCGGTGCCGCGACCCGCGAACCCCTTCCTCGCGGAGCCGCACCAGCAACTGCAGTAG

Protein

MEPPASRPLVNPDEHGEVDTSRYPAPKDATHKVRGRSDLLELMCGAGAVDPELLTVKTFYFFFYSAFGSLFPLMGIYFKQMGMNAGQCGLLIGTRPFVEFLSAPFWGSLADRWRKGRTLLLASLSAWIIFTLPLSWVQPAPVSCVLPINSTAYNLTDPRYDEDWTTPPRSFRVSADKGSPLPVSDALNYDSKANGDWVTPLHSFIVYRTPDIQKTFFLLLLLVVIGEFFSAPAITLADSAVITLLGEDADRYGHQRMFGSLGWGLAMFFVGIALDHSTSFSSHPCGGPQRYEKNYTICFATFSVLMGAALITATQIRFKYEFVSEELAPPPPPSEPTHEEKMQQQLAQQLQLPGLDTSAPPPRQPDLEHAKVFAQTTREMPEWVTVLRQFQNVKAASFLFVAWFMGFGIGLIFTFLFWHLQDINGSPTLYGVASVINHISEIFAYFFSFKLITQMGHVKVLCLGLAGNVLRFLYISWLSDPWWVLPFEFVQGVTHAAVWAACCSYIAQRAPPGLRSSAQGVLQGLHHGLGRGCGAVLGGIAVAKWGTTSTFAGYGILCAVVLAVFAFINFRGGEEPDTGGAGEEEVRAVAEVGVLAPHGVPSNPLPRALSSTRLADLAHHDSYGATNSHAGADSLSVPRPANPFLAEPHQQLQ

Similarity

Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.

Uniprot

H9JP07   A0A2H1W5R2   A0A212FHU3   A0A194QJW9   A0A0N0PBI2   A0A2A4J8A5   + More
A0A0L7L4K1   A0A182XVZ9   A0A2J7Q6E1   A0A2J7Q6E5   A0A182HJ87   A0A084WSJ2   D6WA60   W5J434   A0A182QQC6   A0A182WQP0   A0A182US17   Q7QBE5   A0A182IX66   A0A182FRW9   A0A067RKS3   A0A182JYR7   A0A1Q3FP74   J9JVR6   A0A2S2QBD1   A0A1W4X5R9   Q17P94   E0VPI3   A0A3Q0JAM7   A0A182GZ06   B0W6P4   T1I2U4   A0A1J1HU59   U4U9Z2   A0A182N5C1   A0A182PE32   A0A182XE36   A0A182RIV7   A0A182MQF1   A0A182LCF2   A0A182TUZ0   A0A1B0GL19   A0A1A9WHX7   Q291C2   B4GAX6   B4MNS0   A0A1B0GAG6   A0A3B0J5Y4   B4J6L4   B4KNN0   A0A1A9V2L8   A0A1W4UJH5   B4LM81   A0A0J9RCP8   A1Z9U2   B4P791   A0A0M4EH18   A0A0L0CQG2   B3NQT8   B3MEG0   A0A336MMX4   A0A1I8Q646   Q8SX39   A0A0K8UF83   A0A034WVE3   A0A1A9ZFT0   A0A0A1WZ06   A0A1I8MYF7   W8BD80   A0A3B0J1V9   A0A1A9Y346   A0A1B0BZ24   B4HRN4   A0A1Q3FNW6   A0A0J7KR25   A0A026VW18   A0A195FUJ5   A0A195DCV6   F4WML3   A0A195C870   A0A1B6M3E3   E2BL37   A0A195BCJ1   A0A158N9X1   A0A310SKM1   A0A1B6JP90   A0A0N0BES1   E2AF18   A0A088AFA3   A0A154PKV4   A0A2A3ESX6  

Pubmed

19121390    22118469    26354079    26227816    25244985    24438588    + More
18362917    19820115    20920257    23761445    12364791    14747013    17210077    24845553    17510324    20566863    26483478    23537049    20966253    15632085    17994087    18057021    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    26108605    25348373    25830018    25315136    24495485    24508170    21719571    20798317    21347285   

EMBL

BABH01009687    BABH01009688    ODYU01006510    SOQ48421.1    AGBW02008466    OWR53303.1    + More
KQ459144    KPJ03751.1    KQ460973    KPJ10106.1    NWSH01002588    PCG67908.1    JTDY01002966    KOB70402.1    NEVH01017533    PNF24148.1    PNF24146.1    ATLV01026580    KE525415    KFB53186.1    KQ971312    EEZ98056.2    ADMH02002129    ETN58606.1    AXCN02000147    AAAB01008879    EAA08483.4    KK852411    KDR24471.1    GFDL01005646    JAV29399.1    ABLF02008347    ABLF02036594    GGMS01005856    MBY75059.1    CH477193    EAT48538.1    DS235366    EEB15289.1    JXUM01021833    JXUM01021834    JXUM01021835    KQ560612    KXJ81626.1    DS231849    EDS36875.1    ACPB03016272    CVRI01000021    CRK91608.1    KB631946    ERL87396.1    AXCM01002064    AJWK01034066    CM000071    EAL25190.1    CH479181    EDW32078.1    CH963848    EDW73759.1    CCAG010013620    OUUW01000001    SPP75283.1    CH916367    EDW00917.1    CH933808    EDW10015.1    KRG05026.1    CH940648    EDW60959.1    CM002911    KMY93823.1    AE013599    AAF58217.1    AFH08077.1    CM000158    EDW91056.1    KRJ99593.1    CP012524    ALC41797.1    JRES01000049    KNC34613.1    CH954179    EDV55998.1    KQS62603.1    CH902619    EDV37580.1    UFQS01000801    UFQT01000801    SSX06994.1    SSX27338.1    AY094862    AAM11215.1    GDHF01027010    JAI25304.1    GAKP01000645    JAC58307.1    GBXI01010210    JAD04082.1    GAMC01015450    GAMC01015449    JAB91106.1    SPP75284.1    JXJN01022949    CH480816    EDW47898.1    GFDL01005754    JAV29291.1    LBMM01004119    KMQ92798.1    KK107796    EZA47691.1    KQ981264    KYN43967.1    KQ980989    KYN10667.1    GL888217    EGI64624.1    KQ978220    KYM96366.1    GEBQ01009522    JAT30455.1    GL448921    EFN83587.1    KQ976528    KYM81910.1    ADTU01001417    KQ765222    OAD54077.1    GECU01006638    JAT01069.1    KQ435821    KOX72304.1    GL438984    EFN67973.1    KQ434948    KZC12453.1    KZ288185    PBC34883.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000218220    UP000037510    + More
UP000076408    UP000235965    UP000030765    UP000007266    UP000000673    UP000075886    UP000075920    UP000075903    UP000007062    UP000075880    UP000069272    UP000027135    UP000075881    UP000007819    UP000192223    UP000008820    UP000009046    UP000079169    UP000069940    UP000249989    UP000002320    UP000015103    UP000183832    UP000030742    UP000075884    UP000075885    UP000076407    UP000075900    UP000075883    UP000075882    UP000075902    UP000092461    UP000091820    UP000001819    UP000008744    UP000007798    UP000092444    UP000268350    UP000001070    UP000009192    UP000078200    UP000192221    UP000008792    UP000000803    UP000002282    UP000092553    UP000037069    UP000008711    UP000007801    UP000095300    UP000092445    UP000095301    UP000092443    UP000092460    UP000001292    UP000036403    UP000053097    UP000078541    UP000078492    UP000007755    UP000078542    UP000008237    UP000078540    UP000005205    UP000053105    UP000000311    UP000005203    UP000076502    UP000242457   

PRIDE

H9JP07    A1Z9U2    Q8SX39   

Pfam

PF12832   MFS_1_like        + More
PF00060   Lig_chan
PF10613   Lig_chan-Glu_bd
PF07690   MFS_1
PF00035   dsrm
PF02137   A_deamin

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR024989   MFS_assoc_dom       
IPR028082   Peripla_BP_I       
IPR019594   Glu/Gly-bd       
IPR001320   Iontro_rcpt       
IPR001508   Iono_rcpt_met       
IPR011701   MFS       
IPR014720   dsRBD_dom       
IPR002466   A_deamin       

SUPFAM

SSF103473   SSF103473        + More
SSF53822   SSF53822       

CDD

cd06174  MFS
cd00048  DSRM

ProteinModelPortal

H9JP07   A0A2H1W5R2   A0A212FHU3   A0A194QJW9   A0A0N0PBI2   A0A2A4J8A5   + More
A0A0L7L4K1   A0A182XVZ9   A0A2J7Q6E1   A0A2J7Q6E5   A0A182HJ87   A0A084WSJ2   D6WA60   W5J434   A0A182QQC6   A0A182WQP0   A0A182US17   Q7QBE5   A0A182IX66   A0A182FRW9   A0A067RKS3   A0A182JYR7   A0A1Q3FP74   J9JVR6   A0A2S2QBD1   A0A1W4X5R9   Q17P94   E0VPI3   A0A3Q0JAM7   A0A182GZ06   B0W6P4   T1I2U4   A0A1J1HU59   U4U9Z2   A0A182N5C1   A0A182PE32   A0A182XE36   A0A182RIV7   A0A182MQF1   A0A182LCF2   A0A182TUZ0   A0A1B0GL19   A0A1A9WHX7   Q291C2   B4GAX6   B4MNS0   A0A1B0GAG6   A0A3B0J5Y4   B4J6L4   B4KNN0   A0A1A9V2L8   A0A1W4UJH5   B4LM81   A0A0J9RCP8   A1Z9U2   B4P791   A0A0M4EH18   A0A0L0CQG2   B3NQT8   B3MEG0   A0A336MMX4   A0A1I8Q646   Q8SX39   A0A0K8UF83   A0A034WVE3   A0A1A9ZFT0   A0A0A1WZ06   A0A1I8MYF7   W8BD80   A0A3B0J1V9   A0A1A9Y346   A0A1B0BZ24   B4HRN4   A0A1Q3FNW6   A0A0J7KR25   A0A026VW18   A0A195FUJ5   A0A195DCV6   F4WML3   A0A195C870   A0A1B6M3E3   E2BL37   A0A195BCJ1   A0A158N9X1   A0A310SKM1   A0A1B6JP90   A0A0N0BES1   E2AF18   A0A088AFA3   A0A154PKV4   A0A2A3ESX6  

KEGG

101746863    no KO assigned | (RefSeq) major facilitator superfamily domain-containing protein 6

GO

GO:0016021   GO:0005886   GO:0004970   GO:0055085   GO:0003723   GO:0004000   GO:0006396  

Length:

653

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

196.8347

Exp number, first 60 AAs:

2.59375

Total prob of N-in:

0.02033

outside

1  -  58

TMhelix

59  -  78

inside

79  -  117

TMhelix

118  -  140

outside

141  -  214

TMhelix

215  -  237

inside

238  -  257

TMhelix

258  -  280

outside

281  -  294

TMhelix

295  -  314

inside

315  -  394

TMhelix

395  -  417

outside

418  -  426

TMhelix

427  -  449

inside

450  -  455

TMhelix

456  -  478

outside

479  -  545

TMhelix

546  -  568

inside

569  -  653

 

 

Pi

253.962955

Theta

193.109038

Tajima's D

1.209093

CLR

0.140554

CSRT

0.71666416679166

Interpretation

Uncertain