SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14004
Pre Gene Modal
BGIBMGA011347
Annotation
PREDICTED:_uncharacterized_protein_LOC106116608_isoform_X2_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 3.623
 

Sequence

CDS
ATGAACTGCTGCCAGCGTCTTGCCTCCGTGCTTCTCTCCCACATCAACCTCATGCTCGCCCTGTACGCGGGCGCGGCGCTGGTGATGGCGGCGCGACTCAAGTGGGACCCCACGGCGTACGTGGTGCTGCGCCAGCTGTTGCCCGCCGTATACCGGGCCCTAGCCGCAGGTCTGCTCGCCGGCGCCGTGCTGCTGATATTGCTGGGACACCTGACCGCCACAGCGCTCGTCGTACGGCACGCGACCTCGCGTCGCGTTCTGCTCATCCTGTATGCGGTGGTGATGATGGCGCTGGTGCTGGCGGAGGTGGGCTGGGCTTTATGGACGACTCTGCGAGTGGAAGAGTGGCTGCGTGGTCCTGAAGGTCAAGATCTGCTCACCGCGCTGGAAGTGCACGAGCATCTGGTCCCATTGTTCTCCGTGCTTGGTCGACTGCATCCTTTGCCGCAGAAGCTCCACGATCTCATACAGGAGGTGGAGAAGGACGTGCCGTGTAACGCGTACGTGGCGGCGGCGGGCGCGGCGCTACTCGTGGCGCTGCAGGGGCTGGCGGTGGTGCTAGCGCTGCTGCTGGCGCACTACTCGCGCTCCCGGACTCGCCGAAGAGACTCACACAGCTTCGCGACCACAACGACGACGGCTTCGACCAGCAGCGAGAGAGCCCCGCTCCGCACCGCCTACCGGAACGGACGCATCGTGGTGGTGTGA
Protein
MNCCQRLASVLLSHINLMLALYAGAALVMAARLKWDPTAYVVLRQLLPAVYRALAAGLLAGAVLLILLGHLTATALVVRHATSRRVLLILYAVVMMALVLAEVGWALWTTLRVEEWLRGPEGQDLLTALEVHEHLVPLFSVLGRLHPLPQKLHDLIQEVEKDVPCNAYVAAAGAALLVALQGLAVVLALLLAHYSRSRTRRRDSHSFATTTTTASTSSERAPLRTAYRNGRIVVV

Summary

Ontologies

Topology

Length:
235
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
91.1940800000002
Exp number, first 60 AAs:
31.99264
Total prob of N-in:
0.99991
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  48
TMhelix
49  -  71
inside
72  -  86
TMhelix
87  -  109
outside
110  -  169
TMhelix
170  -  192
inside
193  -  235
 
 

Population Genetic Test Statistics

Pi
215.057983
Theta
171.278136
Tajima's D
0.876361
CLR
0.073919
CSRT
0.626768661566922
Interpretation
Uncertain
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