SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14003
Pre Gene Modal
BGIBMGA011346
Annotation
hypothetical_protein_KGM_05879_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 2.706
 

Sequence

CDS
ATGTGGATTCGCAGCCATCGCGCTCCGGTGAAGGCTGCCAAGATGGGTTGCACCAGAGAGATTTGCACTGCTGAGAAGATCTTCATATTCATCAATATAGCGTTCGCGATGTACGCGGGCGCGCTGCTGGCCACGGCGGCGCGGCTGGCGTGGGACCCCAGCACTTACACGTGGTTCCGCTTCCTGTGCGCCGCGCAGTACCGCGTGTCGGCCGCCTACGTGCTGGCGGCGGGCCTGTGGCTGGCCGCGCTCGTGTACCTGGCAGCGGCCGCCGCGCACCGCTCCGCCTCGCACTCGCACTGCCTGCATCTCTACGCGGCGGGCGTGGCGTGCCTCGGGGTGAGCGAGGTGGGGTACGGCGCGTGGATGGGCGTGTCGCTGGCGGCCTGGTGGCGGAGCGCCCCGCAGGCCGAGCTGGCGCGGCGCGGCATGGACCTCATGCACGACATCAAGCCGGCGCTGCTCGCCTTCACGCGGTACAAGGACCTCGTGCGGCCCCTCTACGACATCATCGAGGAGATGGAACGGGAGGCGCCCAACAACGCCTTCGTGATCATCGTGTTCGGGGTCGTGGGAGCCGCGCTGCAGGTGGCGGCGTTCGTGATGGCGCGCATTCTAGCGCGACGGGCGGGCGAGGCGGCCCGCGCCCCCCGGCCCCCCGCCGCGCCCGACGCCGCCGATGACAGCGACGCAGCGGACGAGCCGCCTCCCCCGCACTGGAGGAAGGACGCCAATCTCCGCATGTACACCATACTCGACAAGATTTTCTAG
Protein
MWIRSHRAPVKAAKMGCTREICTAEKIFIFINIAFAMYAGALLATAARLAWDPSTYTWFRFLCAAQYRVSAAYVLAAGLWLAALVYLAAAAAHRSASHSHCLHLYAAGVACLGVSEVGYGAWMGVSLAAWWRSAPQAELARRGMDLMHDIKPALLAFTRYKDLVRPLYDIIEEMEREAPNNAFVIIVFGVVGAALQVAAFVMARILARRAGEAARAPRPPAAPDAADDSDAADEPPPPHWRKDANLRMYTILDKIF

Summary

Pfam
PF00300   His_Phos_1
Interpro
IPR013078   His_Pase_superF_clade-1        + More
IPR029033   His_PPase_superfam       
SUPFAM
SSF53254   SSF53254       
Gene 3D

Ontologies

Topology

Length:
256
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.2365900000001
Exp number, first 60 AAs:
22.65605
Total prob of N-in:
0.99428
POSSIBLE N-term signal
sequence
inside
1  -  26
TMhelix
27  -  49
outside
50  -  68
TMhelix
69  -  91
inside
92  -  103
TMhelix
104  -  126
outside
127  -  183
TMhelix
184  -  206
inside
207  -  256
 
 

Population Genetic Test Statistics

Pi
240.913563
Theta
188.121713
Tajima's D
0.849843
CLR
0.185803
CSRT
0.613369331533423
Interpretation
Uncertain
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