SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14001
Pre Gene Modal
BGIBMGA011262
Annotation
PREDICTED:_uncharacterized_protein_LOC101736680_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.718
 

Sequence

CDS
ATGGCCACCGTTGTTATTACGTTTTTCCTATTTGCACGATTTTATGTTTGTAAAATGGACGCCGACTCTACGGAGAGGCGGAGGGAACGATACACGTCCCGAAGAGACCGGTGGAGTATGAACTCACAACGGCTAGAGCAAATCGTCGCGGAGCTGATGAAACCCATCAGCGACATCCGCCGAAGCTTCGATACAGACCTGAGCGCGCTCTTAGAGGAGTACTTGACGGAGGCGGGGCTCCACGCGCTAGAGGCGGGCGAGCGCGAGGATAATGAGGAGGAGGGACTTCCCGCCAATGGCGTCCCCAACTTCGCGGAGCTGGCGCTGGTGCTGCAGCACTCTGCCTGCGTGTACGGACGGAAGGTCGACTTCCTGTACCAGCACGTGCTCAGCGTCAGCGACTCGCTGCAGCACAGCACGCAGGACGACGCGCCGCCCGACCAGCTGTCGCACGACAACTCGCACGTCGCCAAGCGCCGCCGCAGAGCCTCCGCGGCGTCCGGCGACTTCGTGCTCATCGACCTGGAGCCCTGCCCCGGCGCCAGTCGCGAGCCCGACGCCCGCGTGCCGCCCACCCTGGCGCGCCACTACGTCGAGCTGGAGCCCCGCCCCACGGCTCTCTGGGAGCGCCCGCTCGTGGACTACCGGGGGGAGCCCATCGGGCTGCCGGCCGACTTCTACGTCACTTGGAGGCTACAGAACGGATTACTAGTGGACGAGCTGGTGTCCCCGTCGGGTCCTCGAACGGAGCCCCTGCGGCCCATCTCTCTGGCAGAGCTGCAAGCTGCCATCTTAGCGCACGGCCTTCCCTCTCCGGTGCGCACGTCCACACCCCTGATGCTGGAGGCGCCGCCCCTCGAGCCGCCACCCATCACTCCAGTCGTTGCCAAGAATGAGAGGAAGCGGAGGAATGAAGTCCATATAGAAGACATCGCCGAGGGTTCCTTGAGACTCGTCATCAGCAATGAGCTGGGCGCGCGCCTGGCCGAGGTGGAGGAGTTCAGCGTCCGCGGCGGCTGGGTCTCGCGCGTCATCCGGCGCCGGAAGCTGCGGCTGCTGCACCAGAGACACAAGTCACGGAAGGAGGAGGAAGACTTCACAGTGTTTCGCGGTTTTGACATGGCGGAGGAGGACGTCGGAGGGTTCCCGGGCTGGAGCCGCCCCCCCGCCGCGGCCCTCCCGGCCACCCCGGCCCTCCCGCCCCCCCGCACCGCTGAGGACAGTGACGACGACGGGTTCTTCGAGCAGAGCTCCCTGGGCGACTCCGACTCCTCGCGGCTGGACGAGGAGCAGCGGCACGCGGAGGGCGGCTGGCGTGGCGCGCTAGACGTGCGCGGCGTGGCGGCGCGCGTGCTGGCGGCGTGCGGGCCCCGCGCGCTCCCCGCCGACGCACTGCTGGGCCGAGCGGCACCGCGCCCGCAGGACGTCTCCACCGTGCTGCTCGCCACGCTGTTCCTGGCCAACGCAGGCAACGTGGAAATAATTCAAGGTCCCCCGCTGAGCGTGAACTCGTTCTCAGTTCGGCTGCTGTCCACGGACCACACGCTCTACACGGCCGCTACACAACTTGATCTCGACAAAATATCTCGGTGA
Protein
MATVVITFFLFARFYVCKMDADSTERRRERYTSRRDRWSMNSQRLEQIVAELMKPISDIRRSFDTDLSALLEEYLTEAGLHALEAGEREDNEEEGLPANGVPNFAELALVLQHSACVYGRKVDFLYQHVLSVSDSLQHSTQDDAPPDQLSHDNSHVAKRRRRASAASGDFVLIDLEPCPGASREPDARVPPTLARHYVELEPRPTALWERPLVDYRGEPIGLPADFYVTWRLQNGLLVDELVSPSGPRTEPLRPISLAELQAAILAHGLPSPVRTSTPLMLEAPPLEPPPITPVVAKNERKRRNEVHIEDIAEGSLRLVISNELGARLAEVEEFSVRGGWVSRVIRRRKLRLLHQRHKSRKEEEDFTVFRGFDMAEEDVGGFPGWSRPPAAALPATPALPPPRTAEDSDDDGFFEQSSLGDSDSSRLDEEQRHAEGGWRGALDVRGVAARVLAACGPRALPADALLGRAAPRPQDVSTVLLATLFLANAGNVEIIQGPPLSVNSFSVRLLSTDHTLYTAATQLDLDKISR

Summary

Pfam
PF06278   CNDH2_N        + More
PF16858   CNDH2_C
Interpro
IPR009378   H2_N        + More
IPR031739   Ncaph2       
IPR031737   CNDH2_C       

Ontologies

Topology

Length:
530
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02815
Exp number, first 60 AAs:
0.01148
Total prob of N-in:
0.00127
outside
1  -  530
 
 

Population Genetic Test Statistics

Pi
221.915141
Theta
185.780279
Tajima's D
0.631517
CLR
0.004111
CSRT
0.55727213639318
Interpretation
Uncertain
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