SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13989
Pre Gene Modal
BGIBMGA011338
Annotation
PREDICTED:_cyclin-K_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.187
 

Sequence

CDS
ATGGAGCTTACTTATTTAGTGACGATATCAGACAATATCAGTGTTATTTTGAATAAAACAAGTGCTTCCAAAATGCCTTATTGGTATTATGACAAAAAGGATTTGTTGAATACGCCTTCCTTCCGTGATGGGATAAACAACGATGCTGAGAATCGTTACAGAAAGGAAGGAGCGAGATTCATAATCGACACAGGATCTAAAATGGACTTAGGTTATAATACTGTTGCCACAGGGGTTGTTTATTTTCATCGTTTTTACATGTTTCATTCGTTCAGGACGTTTCCGAGGTACATAACCGCTTGCTGCTGTTTGTTTCTGGCGGGAAAAGTCGAAGAGACACCAAAGAAATGCAAAGATATAATTAAAGTTGCCAAGTCTTTGTTGACGGAACTAAAGTTTGCTAGTTTCGGTGAAAATCCTAAAGAGGAAGTAATGACACTCGAAAGAATTTTGCTGCAGACAATCAAGTTTGACTTTCAGGTCGAACATCCCTATGGGTATCTGCTTAAGTATGCTAAATGTTTGAAGGGCGACAAGACAAAACTACAGAAGATGGTGCAAATGGCTTGGACATTTGTAAATGATAGTTTATGTACAACACTCTGTCTGCAATGGGAGCCTGAAGTGATAGCTGTAGCTCTCATGTTTCTAGCTGGGAAACTCAGTAAATTCGAGGTGGCAGACTGGAATGGACGGCAACCTAAACACAAAGTGTGGTGGGACATGTTTGTTGAGGATATCACTACAGAGCTATTGGAGGATATATGTCATCAGGTATTAGATTTATATTCACCACAGACACAAGCGTCGGGGAACGATTCCCCTCCTTCTGTTCCTCAGCCTCCAAAAAACGAGAAGAAGCCACCCTCCGTTACACCGCCAGCTTCCGTATCACCTGTCGCCGTTACCGCAGCCACTAAGCCGGTGGTCACGCCCATTAAGAACGGAGGGGAAGTTAAAATTGAGCCCCCCAAAGTCGGTATCACCGAGCCTATTCGGTACACGTATCCGTTTACACCAATACCGCATTATCCTCCAGTGTATACGGCTCCGCCTCCTACAATCCCTCCTCCTCCCAGGCTCCCTTTGGTGCCTCCTCCCATGGTATACCCGGACCCACCCCCGGCACCGAACAGGTTCCCTCCCGTCAACGTCCCACCCCCGAACTATTTCACCCCCCTGCCAAACCGAGGACCTCCTCCAGGGCCACCCCCTCGGCCCTACTATCCGCCACCCTAG
Protein
MELTYLVTISDNISVILNKTSASKMPYWYYDKKDLLNTPSFRDGINNDAENRYRKEGARFIIDTGSKMDLGYNTVATGVVYFHRFYMFHSFRTFPRYITACCCLFLAGKVEETPKKCKDIIKVAKSLLTELKFASFGENPKEEVMTLERILLQTIKFDFQVEHPYGYLLKYAKCLKGDKTKLQKMVQMAWTFVNDSLCTTLCLQWEPEVIAVALMFLAGKLSKFEVADWNGRQPKHKVWWDMFVEDITTELLEDICHQVLDLYSPQTQASGNDSPPSVPQPPKNEKKPPSVTPPASVSPVAVTAATKPVVTPIKNGGEVKIEPPKVGITEPIRYTYPFTPIPHYPPVYTAPPPTIPPPPRLPLVPPPMVYPDPPPAPNRFPPVNVPPPNYFTPLPNRGPPPGPPPRPYYPPP

Summary

Similarity
Belongs to the cyclin family.
Pfam
PF00134   Cyclin_N
Interpro
IPR013763   Cyclin-like        + More
IPR006671   Cyclin_N       
IPR036915   Cyclin-like_sf       
SUPFAM
SSF47954   SSF47954       
PDB
2I53     E-value=1.47191e-103,     Score=961

Ontologies

GO

Topology

Length:
412
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.28751
Exp number, first 60 AAs:
0.00866
Total prob of N-in:
0.06593
outside
1  -  412
 
 

Population Genetic Test Statistics

Pi
292.497747
Theta
187.496073
Tajima's D
1.667981
CLR
0.000546
CSRT
0.828608569571521
Interpretation
Uncertain
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