Gene

KWMTBOMO13987

Pre Gene Modal

BGIBMGA011270

Annotation

PREDICTED:_WD_repeat-containing_protein_6_[Amyelois_transitella]

Location

Bomo_Chr23(-):15350838-15356236      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.962

CDS

ATGTCTTTATTAATACGTACAGATGTTACGGCTGTTAAAATTTTCAAAAACTACGTTCTTGCCGGTATTGGAAGCACTATAAATGTATTCGATAAAGCTTCGGCGAGATTAATTACGAAGTTTCAATGTTTAAAAAGCCAAAAAATATATGGTTTTGTAGTATCTAATTGCGGTAATAAAATACTCGTGTTTGGCGGAAAACAGTTCACAGTTTTATCTTTTACGCACTCGCATTATGAGGAGACATTTAAGAGAAACTTCGAACCTATAATATGCGATGATTGGCTTCATTCCGGAGTTTGGCTGAAAGAAGATATTGTTATTTTATTAACTGCTCATAATGTTACTCAGAAATGGAACTTATCAACACAGTCCTTCATATCTCAAGAAGCAGGCAAAGAAAACTCAATATTATACAGTGGACTTATTGTAATGCTGCAAGATGCAATTATGGTCCTAGCTGGGACTGTGTTCTCAGATGTCATCGTGCATAGTAATACTGTTAAGGAACCTCTACATTATTTGAGAGGACACAAGGGTGTCATATTCTCCATATCGTGTGATACAGATAAAGGTTTAATAGTAACAACTTCAGATGACAGATCAGTCAGGATTTGGAGCACAAATATCATAACAGCAAATGCGCATATGCTACAATATTGGAAGGACCATGAAATAACATGCAAATATGAACTGTACGGGCATTCGGCACGAGTCATGAGAAACTGCATCACAAATAATATAGTTATATCAGTAGGAGAAGATTCCGCTATATGCTTTTGGAATTTGAATGGAGAACTAATAAAAAAGAATAACTCACATCAGTATTCTGGTATATGGTCAATAGATGCTGATAAGAATCACCTGGTGACTGGTGGAGGTGATTGTGCAGTTATACTGCATCCACTAACAACTAATAATGGCATTGTTCACAACATTTTAAACTTTGGAACTCAGAGAAAAGTTATGTTCACTGCGAAAAGAAATTTAATAATGTTGGATGATAAAAATTTGTTGCACCATAACACAAACGAGAAATCATCTAAGGTTTATGAATTAAGTCACGAGTCCACATACAAAATGCTGAGTTTATCATCATGCAAGCAAATTATTGCCGTTGCCGATATGAAAGGAAAACTTGATGTCTTTGTTGAAAACTGTAAGAATGGACACTTAACAAAAATAATTGACACAAAATTGCAATTAGGAAAGATATTATCAATGCAGTGGGCTGGCAACAGACATGTAATTATTTGTTCTGAAAATGGTGCAATAACAGTGTTAGCTGCAAATGGGGAAAATACAGAAGTTTATGCCAATTTCATTTTGCCTCCTTGCAAAGAAAGATGGCTTACGGCCACAGCTTTAAACAATAAAAATGATGTATTTGCTTTAGGAGACAGGTGTGGTAGTATCCATATTTATGTTAAAGGAAAATGTAATCCAATCAAAAGCTTTAAGAAAGTACACGGAAGATATGGTCCAACATCAATTAAATTTAACAGCAATGAACTTGTGTCAACCGGAAGAGATGGGACAATCAAATATTTCAAAATCGATATTCACAACGAAATTATATTTATGAGGAGTAGGGTCTTAGAGTTTCAGTGGGTTGAGGAATTCTTGAATACCGATGAAACATTGATATGTGGTTTTCAAGAAAGACTTTTTGTGATTTATGACCTGACAGACAACTCCAAAGTACTTGAAGTGACATGTGGAGGAGGTCACAGGTCGTGGGACGCAGTGCGTTTCATAGAGAAAGTCAATGACGACTTCGAACAATTTGTTAATTTCATTTATTTGAAAAATTCTGAAATACATCTATTGAAGTTTCAACTGAGTAAAATTGTGGCAAAGAATTTAGTGAACGGATCACATTCTAACAACATAAACTGCTTAAAAGTCTTAGTTAGTGATAGATCGAAAACAATTTACGTATCAGGGGGAGAAGACACAACAGTAAGAATATCGACCACAGACAATCAACTCAATTTTAAAGACGTCTTAACATTTAAACAGCTGTCAAACGTCAGAACCCTTAAATTGCAACCTGTAGATGACAACAATAGTGTAATTTTTACAGCTGGAGGCCGTGCACAAATATGTATAAAAAAATGTACTATAAAAGAAAATGAAATTAAGACCCAAGATTTAATTGAGTACATGATAAAGGGTACAGATAAGGAGAGGAAAGGTAATCAGACGTGGCGGAATTGCACAATAGATTGCGATCCAGAGACAAGGATCATGGATATTGCAGTTTTGAAGAATACTGATTACTTCATTTTCACCGGATGTTCCGACGCTTGTCTGCGAGTTTTGAAATATGAATTACTAATCAATAAAATAACATTAATCAATACAATTAGTCACCATGACACATGTATTTTAAAAACCCTTTGTTTCCGGCTGTTGGACAGAGACTTCTTGGTGACAGCCACAACAAGAGGTCTGTTCTCGATATGGCTAGCTTCTGACCTGCTGAAAGAGAACCCTGCGCCGTTTTTCTCAATAAAAACGAACAAATCCGGAATAAATAGTATAAGTTGTTATAATATATCAAAGAACGAAGTTTTACTAGCCACGGCAGGTGATGATAATACCATCTACATGACATCAATAGAGATAAACATCCAAGATAACTTGCCCTCGGCGGTCGTCAAATATTGTTGGAGCTCTGATCAGTTTCACAGCTCCCAGATAACTGGTTTATGGTTGGGCAATGGCTTGCTACTCAGTACATCGGTCGACCAGAGGGTAACTATGTACAGCTGGACTGTTGATGACGGTTTACACTGCTGCTGTCTACGGCAAGGTGTTAGCGACGTGGCTGACATACAAGGGATGGAAATGCTGGAATGTACGAGTGATCACATAAAGCTGTGTGTCTTCGGCAAAGGAATGGAAGTCCTTCAGCTGCAACATACAAACACATAA

Protein

MSLLIRTDVTAVKIFKNYVLAGIGSTINVFDKASARLITKFQCLKSQKIYGFVVSNCGNKILVFGGKQFTVLSFTHSHYEETFKRNFEPIICDDWLHSGVWLKEDIVILLTAHNVTQKWNLSTQSFISQEAGKENSILYSGLIVMLQDAIMVLAGTVFSDVIVHSNTVKEPLHYLRGHKGVIFSISCDTDKGLIVTTSDDRSVRIWSTNIITANAHMLQYWKDHEITCKYELYGHSARVMRNCITNNIVISVGEDSAICFWNLNGELIKKNNSHQYSGIWSIDADKNHLVTGGGDCAVILHPLTTNNGIVHNILNFGTQRKVMFTAKRNLIMLDDKNLLHHNTNEKSSKVYELSHESTYKMLSLSSCKQIIAVADMKGKLDVFVENCKNGHLTKIIDTKLQLGKILSMQWAGNRHVIICSENGAITVLAANGENTEVYANFILPPCKERWLTATALNNKNDVFALGDRCGSIHIYVKGKCNPIKSFKKVHGRYGPTSIKFNSNELVSTGRDGTIKYFKIDIHNEIIFMRSRVLEFQWVEEFLNTDETLICGFQERLFVIYDLTDNSKVLEVTCGGGHRSWDAVRFIEKVNDDFEQFVNFIYLKNSEIHLLKFQLSKIVAKNLVNGSHSNNINCLKVLVSDRSKTIYVSGGEDTTVRISTTDNQLNFKDVLTFKQLSNVRTLKLQPVDDNNSVIFTAGGRAQICIKKCTIKENEIKTQDLIEYMIKGTDKERKGNQTWRNCTIDCDPETRIMDIAVLKNTDYFIFTGCSDACLRVLKYELLINKITLINTISHHDTCILKTLCFRLLDRDFLVTATTRGLFSIWLASDLLKENPAPFFSIKTNKSGINSISCYNISKNEVLLATAGDDNTIYMTSIEINIQDNLPSAVVKYCWSSDQFHSSQITGLWLGNGLLLSTSVDQRVTMYSWTVDDGLHCCCLRQGVSDVADIQGMEMLECTSDHIKLCVFGKGMEVLQLQHTNT

Uniprot

H9JP16   A0A2A4JJV2   A0A2H1WUE9   A0A3S2NMN6   A0A212FHS8   A0A0L7LCI2   + More
A0A2J7PV43   A0A0V0G9P1   A0A023EY21   A0A0J7KWU4   A0A3L8D9J6   A0A2J7PV31   A0A026X2L4   A0A0M8ZX17   A0A088ARN9   A0A2A3E2D0   F4W7E9   A0A151X8M7   A0A154PBE6   A0A232F1A7   E2BQG6   A0A158NPU5   A0A151JSQ9   A0A0L7RDE1   A0A195AU16   E2AVE6   A0A1Y1M087   A0A1W4WWL1   A0A195DSU6   A0A1Y1LY20   A0A151I6V2   A0A1B6D4L0   E0VWF9   A0A067R4E2   A0A146L868   A0A0A9WDW8   A0A0P6E8U5   A0A0P5BU59   A0A1B6HZJ5   A0A1W4X613   E9GLN9   A0A0N8B047   A0A0P5T1U0   A0A0P5FF63   A0A1Y1M098   A0A0P6BKK0   A0A1Y1LXX7   A0A1Y1LY14   A0A2P8Z9N4   A0A165AG08   V3ZI09   A0A2R5LAT4   A0A1S3IYL4   A0A2L2YF30   K1QY02   H2ZTN8   A0A210PPC9   A0A0L8GQE7   A0A1L8GPR7   A0A2R7W0R2   A9C3T6   A0A2R8QLM0   G1KM73   V8NU63   A0A3N0YSI2   A0A0A1WYF2   A0A034WNQ5   F7CZ88   A0A182W3K2   A0A3B3ZKE2   A0A3B3SVH8   A0A3B3ZKD3   A0A131XUE4   A0A147BNN8   A0A0K8VR24   A0A0K8VMX7   A0A0K8W1Y8   A0A182Y8N3   W8BXL6   M7B3B0   A0A182XIE5   Q7Q9X9   A0A2C9KQE6   A0A1B0G1R5   A0A182JUY7   A0A034WQF0   A0A182PHX8   A0A182HYT2   F6ZLR0   A0A0P5HNR7   A0A034WK67   A0A1B0ABY4   A0A1B0ARY4   A0A1A9Y1E5   H2THW1   A0A1I8PBN5   T1JG63   Q17HU0  

Pubmed

19121390    22118469    26227816    25474469    30249741    24508170    + More
21719571    28648823    20798317    21347285    28004739    20566863    24845553    26823975    25401762    21292972    29403074    23254933    26383154    26561354    22992520    9215903    28812685    27762356    23594743    24297900    25830018    25348373    20431018    25463417    29240929    29652888    25244985    24495485    23624526    12364791    14747013    17210077    15562597    18464734    21551351    17510324   

EMBL

BABH01009639    NWSH01001330    PCG71672.1    ODYU01011140    SOQ56695.1    RSAL01000241    + More
RVE43646.1    AGBW02008466    OWR53291.1    JTDY01001710    KOB73105.1    NEVH01020989    PNF20194.1    GECL01001636    JAP04488.1    GBBI01004729    JAC13983.1    LBMM01002308    KMQ95002.1    QOIP01000011    RLU17006.1    PNF20195.1    KK107021    EZA62333.1    KQ435814    KOX72667.1    KZ288427    PBC25855.1    GL887844    EGI69822.1    KQ982409    KYQ56723.1    KQ434856    KZC08724.1    NNAY01001286    OXU24481.1    GL449769    EFN82024.1    ADTU01022755    KQ982014    KYN30635.1    KQ414614    KOC68853.1    KQ976745    KYM75474.1    GL443090    EFN62580.1    GEZM01044209    JAV78398.1    KQ980487    KYN15921.1    GEZM01044204    JAV78409.1    KQ978456    KYM93895.1    GEDC01016712    JAS20586.1    DS235819    EEB17710.1    KK852759    KDR17043.1    GDHC01014690    JAQ03939.1    GBHO01038896    GBHO01038895    JAG04708.1    JAG04709.1    GDIQ01067735    JAN27002.1    GDIP01180565    JAJ42837.1    GECU01027617    JAS80089.1    GL732551    EFX79538.1    GDIQ01225883    JAK25842.1    GDIP01138917    JAL64797.1    GDIQ01258866    JAJ92858.1    GEZM01044205    JAV78408.1    GDIP01021009    JAM82706.1    GEZM01044203    JAV78412.1    GEZM01044208    JAV78399.1    PYGN01000136    PSN53207.1    LRGB01000626    KZS17594.1    KB204089    ESO81945.1    GGLE01002473    MBY06599.1    IAAA01024919    IAAA01024921    IAAA01024922    LAA06752.1    JH816882    EKC33810.1    AFYH01223649    AFYH01223650    NEDP02005569    OWF38296.1    KQ420924    KOF78845.1    CM004472    OCT85858.1    KK854226    PTY13327.1    CR847503    AZIM01001838    ETE65605.1    RJVU01027559    ROL49169.1    GBXI01010188    JAD04104.1    GAKP01002970    JAC55982.1    AAMC01018812    GEFM01005844    JAP69952.1    GEGO01003015    JAR92389.1    GDHF01010985    JAI41329.1    GDHF01012087    JAI40227.1    GDHF01007464    JAI44850.1    GAMC01002513    JAC04043.1    KB577555    EMP26598.1    AAAB01008898    EAA09303.5    CCAG010007356    GAKP01002969    JAC55983.1    APCN01005404    GDIQ01224676    JAK27049.1    GAKP01002971    JAC55981.1    JXJN01002620    JH432192    CH477245    EAT46252.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000037510    UP000235965    + More
UP000036403    UP000279307    UP000053097    UP000053105    UP000005203    UP000242457    UP000007755    UP000075809    UP000076502    UP000215335    UP000008237    UP000005205    UP000078541    UP000053825    UP000078540    UP000000311    UP000192223    UP000078492    UP000078542    UP000009046    UP000027135    UP000000305    UP000245037    UP000076858    UP000030746    UP000085678    UP000005408    UP000008672    UP000242188    UP000053454    UP000186698    UP000000437    UP000001646    UP000008143    UP000075920    UP000261520    UP000261540    UP000076408    UP000031443    UP000076407    UP000007062    UP000076420    UP000092444    UP000075881    UP000075885    UP000075840    UP000002279    UP000092445    UP000092460    UP000092443    UP000005226    UP000095300    UP000008820   

PRIDE

H9JP16    A9C3T6   

Pfam

PF00400   WD40        + More
PF00676   E1_dh

Interpro

IPR011047   Quinoprotein_ADH-like_supfam        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001017   DH_E1       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR034616   BCKDH_E1-a       
IPR029061   THDP-binding       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR011044   Quino_amine_DH_bsu       
IPR011041   Quinoprot_gluc/sorb_DH       

SUPFAM

SSF50998   SSF50998        + More
SSF52518   SSF52518       
SSF50978   SSF50978       
SSF50969   SSF50969       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JP16   A0A2A4JJV2   A0A2H1WUE9   A0A3S2NMN6   A0A212FHS8   A0A0L7LCI2   + More
A0A2J7PV43   A0A0V0G9P1   A0A023EY21   A0A0J7KWU4   A0A3L8D9J6   A0A2J7PV31   A0A026X2L4   A0A0M8ZX17   A0A088ARN9   A0A2A3E2D0   F4W7E9   A0A151X8M7   A0A154PBE6   A0A232F1A7   E2BQG6   A0A158NPU5   A0A151JSQ9   A0A0L7RDE1   A0A195AU16   E2AVE6   A0A1Y1M087   A0A1W4WWL1   A0A195DSU6   A0A1Y1LY20   A0A151I6V2   A0A1B6D4L0   E0VWF9   A0A067R4E2   A0A146L868   A0A0A9WDW8   A0A0P6E8U5   A0A0P5BU59   A0A1B6HZJ5   A0A1W4X613   E9GLN9   A0A0N8B047   A0A0P5T1U0   A0A0P5FF63   A0A1Y1M098   A0A0P6BKK0   A0A1Y1LXX7   A0A1Y1LY14   A0A2P8Z9N4   A0A165AG08   V3ZI09   A0A2R5LAT4   A0A1S3IYL4   A0A2L2YF30   K1QY02   H2ZTN8   A0A210PPC9   A0A0L8GQE7   A0A1L8GPR7   A0A2R7W0R2   A9C3T6   A0A2R8QLM0   G1KM73   V8NU63   A0A3N0YSI2   A0A0A1WYF2   A0A034WNQ5   F7CZ88   A0A182W3K2   A0A3B3ZKE2   A0A3B3SVH8   A0A3B3ZKD3   A0A131XUE4   A0A147BNN8   A0A0K8VR24   A0A0K8VMX7   A0A0K8W1Y8   A0A182Y8N3   W8BXL6   M7B3B0   A0A182XIE5   Q7Q9X9   A0A2C9KQE6   A0A1B0G1R5   A0A182JUY7   A0A034WQF0   A0A182PHX8   A0A182HYT2   F6ZLR0   A0A0P5HNR7   A0A034WK67   A0A1B0ABY4   A0A1B0ARY4   A0A1A9Y1E5   H2THW1   A0A1I8PBN5   T1JG63   Q17HU0  

PDB

6G6N     E-value=0.000309981,     Score=108

KEGG

NA   

GO

GO:0003826   GO:0003863   GO:0009083   GO:0016624   GO:0003824   GO:0005829   GO:0005886   GO:0016021   GO:0005515   GO:0030234   GO:0005840   GO:0006412   GO:0004888   GO:0007166   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR43380:SF1  

Length:

979

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.68409000000001

Exp number, first 60 AAs:

0.45365

Total prob of N-in:

0.07055

outside

1  -  979

 

 

Pi

238.572304

Theta

202.46659

Tajima's D

0.610361

CLR

0.334965

CSRT

0.544872756362182

Interpretation

Uncertain