Gene

KWMTBOMO13985  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011271

Annotation

PREDICTED:_regucalcin-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr23(-):15333101-15339266      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.323

CDS

ATGGCGCCGCAGTTACAAGCTGTGACGGAGCCGGTGTGGCTCGGCGAGGGCCCACACTGGGACCACAACGAGCAGGCCCTATACTTTGTCAGCATCTTCGACGAGACCATACATAAGTACGTGCCAGAAACGGGGAAACATACGAGGTCTAAACTAGACGGGAAGCCAACCTTCATTATACCCATAGAAGGGAAGAAACACCATTTCGTGGTGGGTCTGGACAGGCTGGTCGTGGAGATACAATGGACAGGAGAAGACCAGACGGCCAGGCTCGTCAGGACCGTCGCGGAGGTGGACCAGGACAACCCCAACAATAGATTCAACGACGCTAAAGCTGACCCCAGGGGCAGGCTGTTTGCCGGAACGATGGGTCACGAATACGAACCGGGAAAGTTCGACCTGAAGAAGGGGTCTCTGTACCGCATCGACCCGGACGGCTCCGTGCACCGCCTCGAGTCCAACATCGACATCTCCAACGGCCTCTGCTGGGACCTGCAGCGGAGCGCCTTCTACTTCGCGGACTCCTTCGAGTACACCATCAGGAGATACGACTACGACGTGGAGACCGGGAGCATCGCGAACGCAAAGACCGTGTTTAAGTACAGCGACCACGGACTGGAAGGTATCGTGGACGGCATGACCATAGACACGGACGGTAACCTCTGGGTGGCCAACTTTGATGGACGACAGGTGTTAAAGATCGATCCTCGTGGCGGCAAACTTCTGCAGAAGATCCCGATACCGGCGCTCCAAGTCACGTCAGTGACATTCGGGGGTCCGGACCTGGACCAGTTGTACGTGACCTCCGCCTCTATGAACCGCGGCGAAGAACAACTCCCGCCCTGCGGCTCTACCTTTAGACTGGACGGACTCGAGGTCAAAGGACATCCTAATGTGAACGTGCGTCTTCAGTGA

Protein

MAPQLQAVTEPVWLGEGPHWDHNEQALYFVSIFDETIHKYVPETGKHTRSKLDGKPTFIIPIEGKKHHFVVGLDRLVVEIQWTGEDQTARLVRTVAEVDQDNPNNRFNDAKADPRGRLFAGTMGHEYEPGKFDLKKGSLYRIDPDGSVHRLESNIDISNGLCWDLQRSAFYFADSFEYTIRRYDYDVETGSIANAKTVFKYSDHGLEGIVDGMTIDTDGNLWVANFDGRQVLKIDPRGGKLLQKIPIPALQVTSVTFGGPDLDQLYVTSASMNRGEEQLPPCGSTFRLDGLEVKGHPNVNVRLQ

Uniprot

H9JP17   A0A2A4JI81   I4DLB5   A0A0N1I833   A0A212FHS6   A0A194QNP8   + More
A0A3S2LTM3   A0A2Z5U7W2   I4DP01   A0A0L7L6D7   H9JP83   A0A0N0PBN4   I4DLC0   A0A2A4JIX8   A0A0L7L6J1   A0A2H1WUP7   A0A194QJM9   A0A194RFD5   A0A212FHT2   A0A0N1IES4   A0A194QNQ3   A0A194QHS8   A0A194QI87   E0XEM8   A0A194QHX1   A0A0N1IP04   A0A194QJM0   A0A2J7PV34   A0A1Y1KUS1   J3JZF0   D6WJC9   A0A139WHG8   A0A2P8Z9M7   U4TVX1   A0A2J7PV36   M9NHL6   A0A1B6LND9   A0A1B6DWB3   W8ANX0   A0A0Q9X2K6   A0A1B6G0U5   A0A1B6GG13   B4L5N8   D6WJC6   A0A0Q9XH70   V5I8P9   M4QVG7   M9NK07   A0A1B0DL94   B4MG80   A0A1D2NDD8   M4QII6   M4QKU5   A0A0Q9VYG4   A0A1L8DLY9   A0A084VI31   A0A0Q9X3C4   A0A1L8DM86   A0A336KBK1   A0A336KH96   M4QIK2   A0A1B6JPW2   J9LYB7   M4QID0   A0A1B6J451   B3MXT5   A0A0P8ZSH9   A0A0P8XYJ7   B3LWR9   A0A0P9AQK9   Q9VYR1   Q76NR6   A0A0Q5TC32   N6TMF5   A0A182IEG6   C6TP78   A0A0R1EAS6   A0A0N1IGA3   B4PYN1   A0A1B6D0K5   Q9NDP1   D6WJC8   A0A182L2J6   A0A182X1I5   A0A0P8XZ51   B3NXM6   Q16IH7   J9JXU7   A0A182IYV2   A0A1W4VZ14   B4R3K9   E7BDF0   A0A1B6EIG4   E7BDE9   A0A1A8CI06   A0A1A8IYK7   A0A1A8AP47   A0A1S4GW88   A0A1W4XLV1   B4ILA7  

Pubmed

19121390    22651552    26354079    22118469    26227816    28004739    + More
22516182    18362917    19820115    29403074    23537049    24495485    17994087    18057021    23493635    27289101    24438588    10788801    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    20966253    17510324    21339509    12364791   

EMBL

BABH01009637    NWSH01001330    PCG71671.1    AK402083    BAM18705.1    KQ460880    + More
KPJ11522.1    AGBW02008466    OWR53292.1    KQ458761    KPJ05106.1    RSAL01000241    RVE43645.1    AP017497    BBB06781.1    AK403222    BAM19641.1    JTDY01002624    KOB71073.1    KPJ11518.1    AK402088    BAM18710.1    PCG71668.1    KOB71072.1    ODYU01011140    SOQ56696.1    KPJ05120.1    KQ460297    KPJ16169.1    OWR53293.1    KPJ11521.1    KPJ05111.1    KPJ05108.1    KPJ05109.1    GU013474    ADK55065.1    KPJ05107.1    KPJ11519.1    KPJ05110.1    NEVH01020989    PNF20197.1    GEZM01075834    GEZM01075833    JAV63930.1    BT128631    AEE63588.1    KQ971343    EFA03133.1    KYB27438.1    PYGN01000136    PSN53206.1    KB631643    ERL84922.1    PNF20199.1    JN036578    AFJ24877.1    GEBQ01028432    GEBQ01014707    GEBQ01009166    GEBQ01008064    JAT11545.1    JAT25270.1    JAT30811.1    JAT31913.1    GEDC01007379    JAS29919.1    GAMC01020362    GAMC01020361    JAB86193.1    CH964232    KRF99329.1    GECZ01013723    JAS56046.1    GECZ01008401    JAS61368.1    CH933811    EDW06497.2    KRG07000.1    EFA03136.1    KRG07001.1    GALX01004305    JAB64161.1    KC689140    AGH29386.1    JN036579    AFJ24878.1    AJVK01016346    AJVK01016347    CH940672    EDW57403.2    LJIJ01000079    ODN03278.1    KC689138    KC689139    KC689142    KC689143    KC689145    KC689146    KC689147    KC689148    KC689149    KC689150    KC689151    KC689152    KC689154    KC689155    KC689156    AGH29384.1    AGH29385.1    AGH29388.1    AGH29389.1    AGH29391.1    AGH29392.1    AGH29393.1    AGH29394.1    AGH29395.1    AGH29396.1    AGH29397.1    AGH29398.1    AGH29400.1    AGH29401.1    AGH29402.1    KC689141    AGH29387.1    KRF77757.1    GFDF01006606    JAV07478.1    ATLV01013269    KE524849    KFB37625.1    KRF99328.1    GFDF01006607    JAV07477.1    UFQS01000275    UFQT01000275    SSX02284.1    SSX22660.1    SSX02283.1    SSX22659.1    KC689153    AGH29399.1    GECU01006486    JAT01221.1    ABLF02034011    KC689144    AGH29390.1    GECU01013752    JAS93954.1    CH902630    EDV38550.1    KPU77449.1    KPU77448.1    CH902617    KPU79867.1    EDV42707.2    KPU79865.1    AE014298    AY118643    AB036904    AAF48128.1    AAF48129.1    AAF48130.1    AAM50012.1    BAA99283.1    AAN09306.2    CH954180    KQS30449.1    APGK01018473    APGK01018474    KB740076    ENN81654.1    APCN01005203    BT099564    ACU33956.1    CM000162    KRK05853.1    KRK05854.1    KPJ11520.1    EDX00967.1    GEDC01018111    JAS19187.1    AB036903    BAA99282.1    EFA03134.2    KPU79866.1    EDV47327.2    CH478076    EAT34066.1    ABLF02026048    CM000366    EDX17711.1    FR774042    CBY89805.1    GECZ01032052    JAS37717.1    FR774041    CBY89804.1    HADZ01015408    SBP79349.1    HAED01015989    SBR02434.1    HADY01018324    SBP56809.1    AAAB01008964    CH480868    EDW53753.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000283053    + More
UP000037510    UP000235965    UP000007266    UP000245037    UP000030742    UP000007798    UP000009192    UP000092462    UP000008792    UP000094527    UP000030765    UP000007819    UP000007801    UP000000803    UP000008711    UP000019118    UP000075840    UP000002282    UP000075882    UP000076407    UP000008820    UP000075880    UP000192221    UP000000304    UP000192223    UP000001292   

PRIDE

H9JP17    H9JP83    Q9VYR1    Q76NR6    C6TP78   

Pfam

PF08450   SGL        + More
PF00400   WD40

Interpro

IPR013658   SGL        + More
IPR039096   SMP-30/CGR1       
IPR008367   Regucalcin       
IPR005511   SMP-30       
IPR011042   6-blade_b-propeller_TolB-like       
IPR011044   Quino_amine_DH_bsu       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR000033   LDLR_classB_rpt       

SUPFAM

SSF50969   SSF50969        + More
SSF50978   SSF50978       

Gene 3D

2.120.10.30     2.130.10.10    

ProteinModelPortal

H9JP17   A0A2A4JI81   I4DLB5   A0A0N1I833   A0A212FHS6   A0A194QNP8   + More
A0A3S2LTM3   A0A2Z5U7W2   I4DP01   A0A0L7L6D7   H9JP83   A0A0N0PBN4   I4DLC0   A0A2A4JIX8   A0A0L7L6J1   A0A2H1WUP7   A0A194QJM9   A0A194RFD5   A0A212FHT2   A0A0N1IES4   A0A194QNQ3   A0A194QHS8   A0A194QI87   E0XEM8   A0A194QHX1   A0A0N1IP04   A0A194QJM0   A0A2J7PV34   A0A1Y1KUS1   J3JZF0   D6WJC9   A0A139WHG8   A0A2P8Z9M7   U4TVX1   A0A2J7PV36   M9NHL6   A0A1B6LND9   A0A1B6DWB3   W8ANX0   A0A0Q9X2K6   A0A1B6G0U5   A0A1B6GG13   B4L5N8   D6WJC6   A0A0Q9XH70   V5I8P9   M4QVG7   M9NK07   A0A1B0DL94   B4MG80   A0A1D2NDD8   M4QII6   M4QKU5   A0A0Q9VYG4   A0A1L8DLY9   A0A084VI31   A0A0Q9X3C4   A0A1L8DM86   A0A336KBK1   A0A336KH96   M4QIK2   A0A1B6JPW2   J9LYB7   M4QID0   A0A1B6J451   B3MXT5   A0A0P8ZSH9   A0A0P8XYJ7   B3LWR9   A0A0P9AQK9   Q9VYR1   Q76NR6   A0A0Q5TC32   N6TMF5   A0A182IEG6   C6TP78   A0A0R1EAS6   A0A0N1IGA3   B4PYN1   A0A1B6D0K5   Q9NDP1   D6WJC8   A0A182L2J6   A0A182X1I5   A0A0P8XZ51   B3NXM6   Q16IH7   J9JXU7   A0A182IYV2   A0A1W4VZ14   B4R3K9   E7BDF0   A0A1B6EIG4   E7BDE9   A0A1A8CI06   A0A1A8IYK7   A0A1A8AP47   A0A1S4GW88   A0A1W4XLV1   B4ILA7  

PDB

5XFE     E-value=6.21414e-60,     Score=583

KEGG

101745537    K01053 gluconolactonase [EC:3.1.1.17] | (RefSeq) regucalcin-like

PATHWAY

00030    Pentose phosphate pathway - Bombyx mori (domestic silkworm)
00053    Ascorbate and aldarate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)

GO

GO:0030234   GO:0005509   GO:0019853   GO:0004341   GO:0016021   GO:0005576   GO:0005615   GO:0032504   GO:0005840   GO:0006412   GO:0004888   GO:0007166   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR10907  

Length:

304

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00044

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02083

outside

1  -  304

 

 

Pi

17.625212

Theta

31.779347

Tajima's D

-1.689037

CLR

0.619528

CSRT

0.0393480325983701

Interpretation

Uncertain