Gene

KWMTBOMO13984  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011337

Annotation

PREDICTED:_regucalcin-like_[Papilio_xuthus]

Location

Bomo_Chr23(+):15329627-15332429      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.22

CDS

ATGTCGGTGAGAATTGAAAAAATCACGGAGCCCCTAACACTGGGGGAAGGGCCCCACTGGGATGAACGTCAGCAAGCGCTATACTTTGTGAGCATCCAAGATAAAACTATACACAAATATGTACCAACTACTGAAAAACATACAAAAACCAGTTTAGATGGGAGGGTTGGTTTCATATTACCAGTGGAAGGTACAACAGACCAATTTGTAGTGGGAGTCGAACGCAAGTTCCTTTTCATACAGTGGGATGGAGAGGATGGCAGTAAAGTTGCTGTATTAAAGGAATTAGGAGAAGTAGACAAAGACAGACCTAATAACAGGATTAATGATGGCAAAGCAGATCCTCGTGGGAGGTTGTTTGCTGGAACTATGGGTCATGAAGATCCTCCAGGTAACTTTGAGAGAAACAAAGCCTCTCTTTACAAATTGGATTCAGCTAAAGATGGGAAACTAGAGAAGATTATCGAAACTGTGTCATTATCAAACGGCCTTGCTTGGGACTTGAAGGAAAAGGCATTTTATTACACAGATTCCATGCAGTTTTCGATAACGAAATTTGATTATGATGTAGATACTGGAGAAATATCCAACCCCAGAAACATATTTGACTTTAAACAGCGCGGTCTACAAGGCATTCCGGACGGTACAACCATCGACACCGACGGCAACCTTTGGGTGGCCGTGTTTGGAGGCTCATGCGTGCTCAAGATCAATCCTAAAAACGGAGAAATCCTACAAAAATTAGCAATTCCCGCCGAACAAGTAACTTCGGCGACTTTCGGGGGCCCAAATCTGGATATTTTATTTGTAACTTCTGCTTGTTGTAATGTTGGTAAGGAGCAGCTCCCACCCTCCGGAGCTACTTTTATGGTCACCGGGCTGGGAGTGAAAGGGCTTCCCAATGTCAGTGTCAGATTGTGA

Protein

MSVRIEKITEPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFILPVEGTTDQFVVGVERKFLFIQWDGEDGSKVAVLKELGEVDKDRPNNRINDGKADPRGRLFAGTMGHEDPPGNFERNKASLYKLDSAKDGKLEKIIETVSLSNGLAWDLKEKAFYYTDSMQFSITKFDYDVDTGEISNPRNIFDFKQRGLQGIPDGTTIDTDGNLWVAVFGGSCVLKINPKNGEILQKLAIPAEQVTSATFGGPNLDILFVTSACCNVGKEQLPPSGATFMVTGLGVKGLPNVSVRL

Uniprot

H9JP83   A0A2H1WUP7   I4DP01   I4DLC0   A0A2A4JIX8   A0A0L7L6J1   + More
A0A0N0PBN4   A0A212FHT2   A0A194QJM9   A0A0N1I833   I4DLB5   A0A194RFD5   A0A2A4JI81   H9JP17   A0A194QNP8   A0A194QNQ3   A0A212FHS6   A0A3S2LTM3   A0A2Z5U7W2   E0XEM8   A0A1Y1KUS1   A0A2J7PV34   D6WJC9   J3JZF0   A0A0L7L6D7   A0A2J7PV36   A0A0N1IES4   K7J5D9   A0A194QHX1   M9NHL6   A0A194QI87   U4TVX1   U5EWT8   A0A139WHG8   A0A194QHS8   A0A336KBK1   A0A1L8DLY9   A0A336KH96   A0A1B6DWB3   A0A1W4XKZ3   A0A1L8DM86   A0A0Q9X2K6   M9NK07   A0A1W6EW18   A0A2A3E259   A0A087ZSJ2   A0A1I8PKJ7   A0A194QJM0   A0A1W4XLV1   A0A0N1IP04   F4W8D2   A0A2P8Z9M7   V5I8P9   A0A0M8ZQU0   A0A0L7RA20   M4QVG7   M4QKU5   M4QII6   A0A158NKR2   B4MG80   A0A1B6G0U5   D6WJC8   Q9NDP1   A0A151IV06   A0A1B6GG13   A0A195BA50   A0A1B0DL94   A0A0Q9VYG4   A0A1D2NDD8   A0A1W6EWA9   M4QIK2   A0A1B6JPW2   R4G322   A0A1B6J451   M4QID0   T1HLA6   A0A182GDM5   Q9BID6   T1PDE1   Q16IH7   A0A1I8N509   A0A0J7KWI6   J9JXU7   A0A1B6LND9   A0A084VYL7   A0A1W4XBG2   A0A0C9PVI0   A0A1W4XBP4   A0A1Q3FSM1   D6WJC6   A0A2H8TR03   A0A0C9REN7   A0A1I8N523   A0A1W4XBF7   E9IDS8   J9LYB7   W8ANX0   T1HLF0   A0A0P8XYJ7   A0A1J1HLE1  

Pubmed

19121390    22651552    26227816    26354079    22118469    28004739    + More
18362917    19820115    22516182    20075255    23537049    17994087    21719571    29403074    23493635    21347285    10788801    27289101    26483478    12974947    17510324    25315136    24438588    21282665    24495485   

EMBL

BABH01009637    ODYU01011140    SOQ56696.1    AK403222    BAM19641.1    AK402088    + More
BAM18710.1    NWSH01001330    PCG71668.1    JTDY01002624    KOB71072.1    KQ460880    KPJ11518.1    AGBW02008466    OWR53293.1    KQ458761    KPJ05120.1    KPJ11522.1    AK402083    BAM18705.1    KQ460297    KPJ16169.1    PCG71671.1    KPJ05106.1    KPJ05111.1    OWR53292.1    RSAL01000241    RVE43645.1    AP017497    BBB06781.1    GU013474    ADK55065.1    GEZM01075834    GEZM01075833    JAV63930.1    NEVH01020989    PNF20197.1    KQ971343    EFA03133.1    BT128631    AEE63588.1    KOB71073.1    PNF20199.1    KPJ11521.1    AAZX01008996    KPJ05107.1    JN036578    AFJ24877.1    KPJ05109.1    KB631643    ERL84922.1    GANO01000405    JAB59466.1    KYB27438.1    KPJ05108.1    UFQS01000275    UFQT01000275    SSX02284.1    SSX22660.1    GFDF01006606    JAV07478.1    SSX02283.1    SSX22659.1    GEDC01007379    JAS29919.1    GFDF01006607    JAV07477.1    CH964232    KRF99329.1    JN036579    AFJ24878.1    KY563502    ARK19911.1    KZ288446    PBC25614.1    KPJ05110.1    KPJ11519.1    GL887908    EGI69423.1    PYGN01000136    PSN53206.1    GALX01004305    JAB64161.1    KQ435903    KOX69067.1    KQ414619    KOC67710.1    KC689140    AGH29386.1    KC689141    AGH29387.1    KC689138    KC689139    KC689142    KC689143    KC689145    KC689146    KC689147    KC689148    KC689149    KC689150    KC689151    KC689152    KC689154    KC689155    KC689156    AGH29384.1    AGH29385.1    AGH29388.1    AGH29389.1    AGH29391.1    AGH29392.1    AGH29393.1    AGH29394.1    AGH29395.1    AGH29396.1    AGH29397.1    AGH29398.1    AGH29400.1    AGH29401.1    AGH29402.1    ADTU01018655    CH940672    EDW57403.2    GECZ01013723    JAS56046.1    EFA03134.2    AB036903    BAA99282.1    KQ980926    KYN11376.1    GECZ01008401    JAS61368.1    KQ976537    KYM81413.1    AJVK01016346    AJVK01016347    KRF77757.1    LJIJ01000079    ODN03278.1    KY563576    ARK19985.1    KC689153    AGH29399.1    GECU01006486    JAT01221.1    GAHY01002071    JAA75439.1    GECU01013752    JAS93954.1    KC689144    AGH29390.1    ACPB03010982    JXUM01056449    KQ561910    KXJ77200.1    AY028616    AAK26174.1    KA646140    AFP60769.1    CH478076    EAT34066.1    LBMM01002383    KMQ94897.1    ABLF02026048    GEBQ01028432    GEBQ01014707    GEBQ01009166    GEBQ01008064    JAT11545.1    JAT25270.1    JAT30811.1    JAT31913.1    ATLV01018378    KE525231    KFB43061.1    GBYB01005453    JAG75220.1    GFDL01004480    JAV30565.1    EFA03136.1    GFXV01004227    MBW16032.1    GBYB01005451    JAG75218.1    GL762535    EFZ21282.1    ABLF02034011    GAMC01020362    GAMC01020361    JAB86193.1    CH902617    KPU79867.1    CVRI01000006    CRK88362.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000053268    + More
UP000283053    UP000235965    UP000007266    UP000002358    UP000030742    UP000192223    UP000007798    UP000242457    UP000005203    UP000095300    UP000007755    UP000245037    UP000053105    UP000053825    UP000005205    UP000008792    UP000078492    UP000078540    UP000092462    UP000094527    UP000015103    UP000069940    UP000249989    UP000008820    UP000095301    UP000036403    UP000007819    UP000030765    UP000007801    UP000183832   

PRIDE

H9JP83    H9JP17   

Pfam

PF08450   SGL        + More
PF00400   WD40

Interpro

IPR013658   SGL        + More
IPR039096   SMP-30/CGR1       
IPR008367   Regucalcin       
IPR011042   6-blade_b-propeller_TolB-like       
IPR005511   SMP-30       
IPR011044   Quino_amine_DH_bsu       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR000033   LDLR_classB_rpt       

SUPFAM

SSF50969   SSF50969        + More
SSF50978   SSF50978       

Gene 3D

2.120.10.30     2.130.10.10    

ProteinModelPortal

H9JP83   A0A2H1WUP7   I4DP01   I4DLC0   A0A2A4JIX8   A0A0L7L6J1   + More
A0A0N0PBN4   A0A212FHT2   A0A194QJM9   A0A0N1I833   I4DLB5   A0A194RFD5   A0A2A4JI81   H9JP17   A0A194QNP8   A0A194QNQ3   A0A212FHS6   A0A3S2LTM3   A0A2Z5U7W2   E0XEM8   A0A1Y1KUS1   A0A2J7PV34   D6WJC9   J3JZF0   A0A0L7L6D7   A0A2J7PV36   A0A0N1IES4   K7J5D9   A0A194QHX1   M9NHL6   A0A194QI87   U4TVX1   U5EWT8   A0A139WHG8   A0A194QHS8   A0A336KBK1   A0A1L8DLY9   A0A336KH96   A0A1B6DWB3   A0A1W4XKZ3   A0A1L8DM86   A0A0Q9X2K6   M9NK07   A0A1W6EW18   A0A2A3E259   A0A087ZSJ2   A0A1I8PKJ7   A0A194QJM0   A0A1W4XLV1   A0A0N1IP04   F4W8D2   A0A2P8Z9M7   V5I8P9   A0A0M8ZQU0   A0A0L7RA20   M4QVG7   M4QKU5   M4QII6   A0A158NKR2   B4MG80   A0A1B6G0U5   D6WJC8   Q9NDP1   A0A151IV06   A0A1B6GG13   A0A195BA50   A0A1B0DL94   A0A0Q9VYG4   A0A1D2NDD8   A0A1W6EWA9   M4QIK2   A0A1B6JPW2   R4G322   A0A1B6J451   M4QID0   T1HLA6   A0A182GDM5   Q9BID6   T1PDE1   Q16IH7   A0A1I8N509   A0A0J7KWI6   J9JXU7   A0A1B6LND9   A0A084VYL7   A0A1W4XBG2   A0A0C9PVI0   A0A1W4XBP4   A0A1Q3FSM1   D6WJC6   A0A2H8TR03   A0A0C9REN7   A0A1I8N523   A0A1W4XBF7   E9IDS8   J9LYB7   W8ANX0   T1HLF0   A0A0P8XYJ7   A0A1J1HLE1  

PDB

5XFE     E-value=2.98562e-62,     Score=603

KEGG

101745878    K01053 gluconolactonase [EC:3.1.1.17] | (RefSeq) regucalcin-like

PATHWAY

00030    Pentose phosphate pathway - Bombyx mori (domestic silkworm)
00053    Ascorbate and aldarate metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)

GO

GO:0005509   GO:0030234   GO:0019853   GO:0004341   GO:0016021   GO:0005840   GO:0006412   GO:0004888   GO:0007166   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR10907  

Length:

306

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02845

Exp number, first 60 AAs:

0.0017

Total prob of N-in:

0.05410

outside

1  -  306

 

 

Pi

14.637545

Theta

22.527388

Tajima's D

-0.993321

CLR

51.015639

CSRT

0.141092945352732

Interpretation

Uncertain