Gene

KWMTBOMO13982

Annotation

thymosin_isoform_2_[Bombyx_mori]

Location

Bomo_Chr23(+):15276387-15306538      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.733 Nuclear   Reliability : 1.809

CDS

ATGGCCTGCTCCGTGAGTGACACTCCCTCCCTGAAAGACCTCCCCAAGGTCGCCACAGACCTGAAGAGTCAGCTCGAAGGCTTCAACACCAGCTGTCTCCGTGACGTCGACACCAATGAAAAGATTGTGCTTCCGTCTGCTGAAGACGTCGCCACTGAGAAGACCCAGAAGTCTTTATTCGACGGTATCGAGAAGTTTGATTCGAGCCAGCTGAAGCACACCGAGACTCAGGAGAAGAACCCGCTTCCGGACAAAGATGCTATCGAAGCGGAGAAGGAAAAGAACAAATTCCTGAACGGCATCGAGAACTTCGATCCCACTAAGCTGAAGCACACGGAAACGTGCGAGAAGAACCCGCTCCCCACAAAGGACGTCATTGAGCAAGAGAAATCAGCTTGA

Protein

MACSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA

Uniprot

Q1HPK4   F0UYY4   F0UYY3   Q1HPK5   A0A3G1T1A8   S4PN24   + More
I4DJ27   I4DMF6   F0UYY2   H9JP80   A0A0L7LLT7   A0A212FHV6   A0A2H1WUG0   A0A0N1PHF4   A0A0K8TPM2   A0A0A1X9V1   A0A1B0FFL3   A0A1A9YJC6   A0A1A9URI4   A0A1B0BAX6   W8BSZ1   A0A0K8UPT1   A0A034WS10   A0A0M4FA81   Q29I45   B4HA94   B3MSL6   B4L6M8   B4M7M1   A0A0A9W667   B4JNG8   V5GT08   A0A2A4JHU8   A0A1W4UPT4   B4NPB2   B4Q0F4   B4I124   B3NSU4   O97428   A0A3B0J7H2   A0A232F2S3   K7INK2   D5AEL7   B4R496   A0A0J7L1Z9   E1CG03   R4ULW2   A0A2J7RBX8   A0A069DP70   A0A088S8V1   R4FMW2   A0A2S2P0M9   A0A1L8EFS3   A0A1I8Q2C2   A0A3S2LQR7   A0A336MEM7   A0A158P488   A0A3L8DFD4   E2B766   E1ZYC2   A6YPH1   T1E385   E0VHJ7   A0A154P4V2   A0A023EG91   E9IS90   A0A0L7QV20   A0A195DDW7   A0A195BD55   F4WM27   A0A151X9Y7   A0A0A9WAU5   B0X0W6   A0A1B6FQ45   J3JXQ6   A0A026X0B5   A0A1B6KZA1   A0A1Q3FI51   A0A195FTU4   A0A170Y6M5   E1CG02   A0A087ZWC4   Q16IH8   A0A195C627   R4WE78   A0A2J7RBY2   A0A1J1IWA6   E1CG00   A0A2P8ZA28   A0A1J1IYD0   A0A146M8L7   V5GWW6   A0A1B6E637   A0A023FAS6   A0A1W4X3X9   A0A224XWS6   A0A2S2Q064   A0A2J7RBY8   A0A182N0W0   A0A1W4X5A0  

Pubmed

21585579    23622113    22651552    19121390    26227816    22118469    + More
26354079    26369729    25830018    24495485    25348373    15632085    17994087    25401762    26823975    17550304    10731132    12537568    12537572    12537573    12537574    15163409    16110336    17569856    17569867    22193718    26109357    26109356    28648823    20075255    20529303    26334808    25315136    21347285    30249741    20798317    18207082    24330624    20566863    24945155    21282665    21719571    22516182    24508170    17510324    23691247    29403074    25474469   

EMBL

DQ443398    FJ602790    ABF51487.1    ACM24356.1    FJ986208    ADD21558.1    + More
FJ986207    ADD21557.1    DQ443397    ABF51486.1    MG846901    AXY94753.1    GAIX01003240    JAA89320.1    AK401295    BAM17917.1    AK402474    BAM19096.1    ADD21556.1    BABH01009636    JTDY01000596    KOB76523.1    AGBW02008465    OWR53320.1    ODYU01011140    SOQ56698.1    KQ460880    KPJ11510.1    GDAI01001763    JAI15840.1    GBXI01006213    JAD08079.1    CCAG010015760    JXJN01011213    GAMC01014221    GAMC01014220    JAB92334.1    GDHF01023969    JAI28345.1    GAKP01000596    JAC58356.1    CP012528    ALC49270.1    CH379064    EAL31561.1    CH479239    EDW37488.1    CH902622    EDV34771.1    CH933812    EDW06024.1    CH940653    EDW62788.1    GBHO01041626    GBRD01007392    GDHC01018538    JAG01978.1    JAG58429.1    JAQ00091.1    CH916371    EDV92261.1    GALX01003694    JAB64772.1    NWSH01001330    PCG71665.1    CH964291    EDW86352.2    CM000162    EDX01238.1    CH480819    EDW53205.1    CH954180    EDV45774.1    AE014298    AY089633    KX531317    AL033125    AAF45919.1    AAF45920.1    AAL90371.1    AFH07230.1    AHN59323.1    ANY27127.1    CAA21832.1    OUUW01000003    SPP78204.1    NNAY01001103    OXU25126.1    BT124754    ADF28795.1    CM000366    EDX17038.1    LBMM01001269    KMQ96618.1    AB534913    BAJ11763.1    KC632251    AGM32065.1    NEVH01005889    PNF38340.1    GBGD01003239    JAC85650.1    KJ995732    AIO05898.1    ACPB03017118    GAHY01000808    JAA76702.1    GGMR01010331    MBY22950.1    GFDG01001232    JAV17567.1    RSAL01000412    RVE41853.1    UFQS01000452    UFQT01000452    SSX04153.1    SSX24518.1    ADTU01001360    QOIP01000008    RLU19167.1    GL446149    EFN88427.1    GL435204    EFN73821.1    EF638982    ABR27867.1    GALA01000595    JAA94257.1    DS235171    EEB12883.1    KQ434819    KZC06907.1    GAPW01005964    GEHC01000003    JAC07634.1    JAV47642.1    GL765318    EFZ16568.1    KQ414727    KOC62470.1    KQ980989    KYN10614.1    KQ976519    KYM82142.1    GL888217    EGI64671.1    KQ982353    KYQ57192.1    GBHO01041624    GBRD01007391    JAG01980.1    JAG58430.1    DS232247    EDS38358.1    GECZ01017451    GECZ01016814    JAS52318.1    JAS52955.1    BT128027    AEE62988.1    KK107064    EZA60839.1    GEBQ01023205    JAT16772.1    GFDL01007794    JAV27251.1    KQ981264    KYN44040.1    GEMB01003604    JAR99613.1    AB534912    BAJ11762.1    CH478076    EAT34065.1    KQ978220    KYM96314.1    AK418317    BAN21523.1    PNF38342.1    CVRI01000063    CRL04563.1    AB534910    BAJ11760.1    PYGN01000131    PSN53355.1    CRL04564.1    GDHC01003014    JAQ15615.1    GALX01003693    JAB64773.1    GEDC01003920    JAS33378.1    GBBI01000125    JAC18587.1    GFTR01003476    JAW12950.1    GGMS01001955    MBY71158.1    PNF38341.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053240    UP000092444    UP000092443    + More
UP000078200    UP000092460    UP000092553    UP000001819    UP000008744    UP000007801    UP000009192    UP000008792    UP000001070    UP000218220    UP000192221    UP000007798    UP000002282    UP000001292    UP000008711    UP000000803    UP000268350    UP000215335    UP000002358    UP000000304    UP000036403    UP000235965    UP000095301    UP000015103    UP000095300    UP000283053    UP000005205    UP000279307    UP000008237    UP000000311    UP000009046    UP000076502    UP000053825    UP000078492    UP000078540    UP000007755    UP000075809    UP000002320    UP000053097    UP000078541    UP000005203    UP000008820    UP000078542    UP000183832    UP000245037    UP000192223    UP000075884   

PRIDE

Q1HPK4    Q1HPK5    H9JP80    O97428    D5AEL7   

Pfam

PF01290   Thymosin

Interpro

IPR038386   Beta-thymosin_sf        + More
IPR001152   Beta-thymosin       

Gene 3D

1.20.5.520    

ProteinModelPortal

Q1HPK4   F0UYY4   F0UYY3   Q1HPK5   A0A3G1T1A8   S4PN24   + More
I4DJ27   I4DMF6   F0UYY2   H9JP80   A0A0L7LLT7   A0A212FHV6   A0A2H1WUG0   A0A0N1PHF4   A0A0K8TPM2   A0A0A1X9V1   A0A1B0FFL3   A0A1A9YJC6   A0A1A9URI4   A0A1B0BAX6   W8BSZ1   A0A0K8UPT1   A0A034WS10   A0A0M4FA81   Q29I45   B4HA94   B3MSL6   B4L6M8   B4M7M1   A0A0A9W667   B4JNG8   V5GT08   A0A2A4JHU8   A0A1W4UPT4   B4NPB2   B4Q0F4   B4I124   B3NSU4   O97428   A0A3B0J7H2   A0A232F2S3   K7INK2   D5AEL7   B4R496   A0A0J7L1Z9   E1CG03   R4ULW2   A0A2J7RBX8   A0A069DP70   A0A088S8V1   R4FMW2   A0A2S2P0M9   A0A1L8EFS3   A0A1I8Q2C2   A0A3S2LQR7   A0A336MEM7   A0A158P488   A0A3L8DFD4   E2B766   E1ZYC2   A6YPH1   T1E385   E0VHJ7   A0A154P4V2   A0A023EG91   E9IS90   A0A0L7QV20   A0A195DDW7   A0A195BD55   F4WM27   A0A151X9Y7   A0A0A9WAU5   B0X0W6   A0A1B6FQ45   J3JXQ6   A0A026X0B5   A0A1B6KZA1   A0A1Q3FI51   A0A195FTU4   A0A170Y6M5   E1CG02   A0A087ZWC4   Q16IH8   A0A195C627   R4WE78   A0A2J7RBY2   A0A1J1IWA6   E1CG00   A0A2P8ZA28   A0A1J1IYD0   A0A146M8L7   V5GWW6   A0A1B6E637   A0A023FAS6   A0A1W4X3X9   A0A224XWS6   A0A2S2Q064   A0A2J7RBY8   A0A182N0W0   A0A1W4X5A0  

PDB

3U9Z     E-value=1.13476e-09,     Score=144

KEGG

733028    no KO assigned | (RefSeq) thymosin

GO

GO:0007015   GO:0003785   GO:0005634   GO:0005737   GO:0007420   GO:0035193   GO:0005829   GO:0003779   GO:0005840   GO:0006412   GO:0004888   GO:0007166   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.17017

outside

1  -  132

 

 

Pi

189.785903

Theta

198.145189

Tajima's D

0.064672

CLR

10.749257

CSRT

0.387630618469077

Interpretation

Uncertain