Gene

KWMTBOMO13973

Pre Gene Modal

BGIBMGA011275

Annotation

PREDICTED:_transmembrane_protein_183_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr23(-):15073825-15077686      View in EpiBrowser

Full name

Transmembrane protein 183      

Location in the cell

Nuclear   Reliability : 2.42

CDS

ATGAGGAAGAAAAAGTCTCAAAAGAAGAAAGTTCTTGAAGATTTTCCAGTTAATGTCAAGCCAAAAGATGCCAAGCCCACCGACCCGTTAAAGTTAACGAAAGCGGAGAAAGTGACCGCTGATTTAACTTGGGACGAATTAGACGCAGTTGATGACATCATAGAGGAACTGGGCGAAGATGGCTCAAAGAACTTAGTGAGCAGAAAGAAACGTAACCATTCACAATGTGAAGATAAATTTAACGAAAGACCGGGAAATGTTTATCCCGAAATCGTCTGGTACTGGTTATCCCAGTACATCAAGCCGGAAGATATTGGCAACTTTGCCGGTATAAACAAAACGACCTACGCTCTGACGAAGCGTGAGTCGTTTTGGAGATCCATATACAACAGGTACTGTAAAAATCACCCAAATTTACCAGATAGATTGCGCATAGAGAACAGTTACCAAACGTACGGACTGCGCCAGAGGGTGATACGGGCTTTGTATCACACATATGACGTGTTCGTGAAGAAAGTTCAAACGATGACAGCAGAAGGTCGTGCGTATCAACTGGCCCGCAGGAGGTGCGTCAGCGTATGGTTTTATAAGGGATCTTCAGTGTCTTGGGCAGTTTATTTCAAATTTAAGAAGCTCCAAATAAAAGAGCGTACTAAAACACAGGATTTTATCACGGAGCTGGGCAGGATCGACGCTAATCCTGACCAAGACACCCAAGTTCTGCAGGTAACCTGCCGCAACTTTCACGAAGTCCCACCACTGATGGGCATGATTCTGTCCTCGGTGACCATGGTCCACTCGCACAAGGCCATCCACCAGCGCCTGTACCTCGACTTCAACACCGGCAGCTACAACGTCGGCAAGGACATCCTGCCGGAGTGCACGGTGGTTTTGGACACAGTTCTGAACATGCACGTTTACGACTGGTGGCACCCCAAATACCCACATTTTGATAACAAGACGCCAACGTGCACGGAGGACGATGAGGTCGTACCGATGCTCAAGAAGGATTTCTTCGCAATCAAAGAAGGAGATTTCGTTTAG

Protein

MRKKKSQKKKVLEDFPVNVKPKDAKPTDPLKLTKAEKVTADLTWDELDAVDDIIEELGEDGSKNLVSRKKRNHSQCEDKFNERPGNVYPEIVWYWLSQYIKPEDIGNFAGINKTTYALTKRESFWRSIYNRYCKNHPNLPDRLRIENSYQTYGLRQRVIRALYHTYDVFVKKVQTMTAEGRAYQLARRRCVSVWFYKGSSVSWAVYFKFKKLQIKERTKTQDFITELGRIDANPDQDTQVLQVTCRNFHEVPPLMGMILSSVTMVHSHKAIHQRLYLDFNTGSYNVGKDILPECTVVLDTVLNMHVYDWWHPKYPHFDNKTPTCTEDDEVVPMLKKDFFAIKEGDFV

Similarity

Belongs to the TMEM183 family.

Keywords

Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Transmembrane protein 183

Uniprot

H9JP21   A0A3S2NWQ0   A0A0L7L597   A0A212FHV5   A0A194REB4   A0A194QIA2   + More
S4PEQ5   A0A2A4K6A0   A0A2W1BR40   A0A2H1W6Q3   A0A2H1VXZ9   V5GY46   A0A067RHM9   A0A0T6B8U3   A0A1W4X8X2   A0A2J7PIG7   D6WC21   A0A0L7QUW0   K1RT03   A0A1B6KPU7   A0A1B6FBJ0   A0A1B6I9A6   T1JE09   A0A0N0BJF0   A0A1Y1MMQ5   A0A210QHX3   A0A088A1Z7   A0A2A3ELN8   A0A0J7L337   A0A0L8HG58   A0A1U7QRY2   K9IJ48   E2AX32   Q5EA86   W5NR90   E0VPE2   L8ILS2   G3TKT7   G3UI67   G1SQI5   F1S7U5   G1P809   A0A212DH41   L5KXX8   F4X4S1   E9J4R0   A0A026W6I0   A0A3L8D391   A0A2R8ZPV3   L5MB85   A0A151HY81   A0A158NWB6   A0A2R8ZUI5   A0A2J8UXC3   I3MJ78   A0A091QI16   A0A1S3KB41   A0A2Y9JYK0   A0A1S3KA19   E2BXG0   A0A2Y9TK78   A0A2G9RJW1   H0WHG9   G3WU55   A7SQM0   A0A2K6GSK9   G9KTZ4   H0VYK4   A0A096NE70   A0A151II63   A0A2Y9JU47  

Pubmed

19121390    26227816    22118469    26354079    23622113    28756777    + More
24845553    18362917    19820115    22992520    28004739    28812685    20798317    16305752    20809919    20566863    22751099    21993624    30723633    29294181    23258410    21719571    21282665    24508170    30249741    22722832    21347285    21709235    17615350    23236062   

EMBL

BABH01009624    RSAL01000042    RVE50815.1    JTDY01002856    KOB70595.1    AGBW02008465    + More
OWR53311.1    KQ460297    KPJ16173.1    KQ458761    KPJ05124.1    GAIX01004382    JAA88178.1    NWSH01000112    PCG79434.1    KZ149990    PZC75607.1    ODYU01006691    SOQ48761.1    ODYU01005133    SOQ45698.1    GALX01003143    JAB65323.1    KK852463    KDR23371.1    LJIG01009342    KRT83271.1    NEVH01025127    PNF16113.1    KQ971309    EEZ99147.1    KQ414735    KOC62261.1    JH818849    EKC37711.1    GEBQ01026511    JAT13466.1    GECZ01022194    JAS47575.1    GECU01024219    JAS83487.1    JH432114    KQ435716    KOX79042.1    GEZM01028262    JAV86358.1    NEDP02003577    OWF48363.1    KZ288215    PBC32620.1    LBMM01001019    KMQ97058.1    KQ418255    KOF88114.1    GABZ01006600    JAA46925.1    GL443520    EFN61982.1    BT020683    BC102408    AMGL01019787    DS235363    EEB15248.1    JH881117    ELR56479.1    AAGW02025291    AAGW02025292    AEMK02000070    DQIR01023868    DQIR01215817    DQIR01227743    DQIR01246896    DQIR01267300    DQIR01310766    HCZ79343.1    HDB83220.1    HDC02374.1    AAPE02053818    MKHE01000002    OWK17553.1    KB030502    ELK15846.1    GL888679    EGI58494.1    GL768112    EFZ12204.1    KK107405    EZA51236.1    QOIP01000014    RLU14972.1    AJFE02080281    AJFE02080282    AJFE02080283    AJFE02080284    KB102788    ELK34983.1    KQ976730    KYM76459.1    ADTU01027869    ADTU01027870    NDHI03003439    PNJ49925.1    AGTP01062219    KK700876    KFQ27210.1    GL451254    EFN79608.1    KV940039    PIO28168.1    AAQR03089245    AAQR03089246    AAQR03089247    AAQR03089248    AEFK01157710    AEFK01157711    AEFK01157712    DS469748    EDO33989.1    JP019775    AES08373.1    AAKN02017930    AHZZ02017352    KQ977505    KYN02268.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000007151    UP000053240    UP000053268    + More
UP000218220    UP000027135    UP000192223    UP000235965    UP000007266    UP000053825    UP000005408    UP000053105    UP000242188    UP000005203    UP000242457    UP000036403    UP000053454    UP000189706    UP000000311    UP000009136    UP000002356    UP000009046    UP000007646    UP000001811    UP000008227    UP000001074    UP000010552    UP000007755    UP000053097    UP000279307    UP000240080    UP000078540    UP000005205    UP000005215    UP000085678    UP000248482    UP000008237    UP000248484    UP000005225    UP000007648    UP000001593    UP000233160    UP000005447    UP000028761    UP000078542   

PRIDE

H9JP21    F1S7U5   

Interpro

IPR026509   TMEM183        + More
IPR036047   F-box-like_dom_sf       

SUPFAM

SSF81383   SSF81383       

ProteinModelPortal

H9JP21   A0A3S2NWQ0   A0A0L7L597   A0A212FHV5   A0A194REB4   A0A194QIA2   + More
S4PEQ5   A0A2A4K6A0   A0A2W1BR40   A0A2H1W6Q3   A0A2H1VXZ9   V5GY46   A0A067RHM9   A0A0T6B8U3   A0A1W4X8X2   A0A2J7PIG7   D6WC21   A0A0L7QUW0   K1RT03   A0A1B6KPU7   A0A1B6FBJ0   A0A1B6I9A6   T1JE09   A0A0N0BJF0   A0A1Y1MMQ5   A0A210QHX3   A0A088A1Z7   A0A2A3ELN8   A0A0J7L337   A0A0L8HG58   A0A1U7QRY2   K9IJ48   E2AX32   Q5EA86   W5NR90   E0VPE2   L8ILS2   G3TKT7   G3UI67   G1SQI5   F1S7U5   G1P809   A0A212DH41   L5KXX8   F4X4S1   E9J4R0   A0A026W6I0   A0A3L8D391   A0A2R8ZPV3   L5MB85   A0A151HY81   A0A158NWB6   A0A2R8ZUI5   A0A2J8UXC3   I3MJ78   A0A091QI16   A0A1S3KB41   A0A2Y9JYK0   A0A1S3KA19   E2BXG0   A0A2Y9TK78   A0A2G9RJW1   H0WHG9   G3WU55   A7SQM0   A0A2K6GSK9   G9KTZ4   H0VYK4   A0A096NE70   A0A151II63   A0A2Y9JU47  

KEGG

101744957    no KO assigned | (RefSeq) transmembrane protein 183

GO

GO:0016021  

PANTHER

PTHR20988  

Subcellular location

Membrane  

Length:

347

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.86596

Exp number, first 60 AAs:

0

Total prob of N-in:

0.56140

outside

1  -  347

 

 

Pi

163.30413

Theta

164.479583

Tajima's D

-0.669513

CLR

0.565462

CSRT

0.202289885505725

Interpretation

Uncertain