SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13972  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011276
Annotation
odorant_binding_protein_[Dendrolimus_kikuchii]
Location in the cell
Extracellular   Reliability : 4.374
 

Sequence

CDS
ATGCTGACAATTTTGTTTTTATTACCCATCGTTGTCGGGGTATTAAGCGGCAACATCCCAGAACAGCCTCGAGTTTATTGCGGAGAATTGCCAAACACGATATACTCGTGTCTTGGCAACCCTAAGATAATTCAACCCGAAGTATCGGAAAAATGTAACAAACCTATTTCCGAGTGCGACAAAACGAGATGTATCTTCAAGGAATCCGGCTGGGCTAAGAACAACGTTATAGACAAGAAGAAGGTTTCTGATTATTTCGAACAGTTCGCCAAGGATAATCCCGATTGGTCTGCAGCGGTTCAGAACTTCAAGACAACTTGTTTATCCGACAGTTTGAAGCCGCAGGGCGTTGATACGAACTGTCCTGCGTACGACATTATACACTGTGCTCTGATCAGCTTTATCAAATTCGCATCTCCGTCCCAATGGTCGACTTCGGAGCAGTGCGTGTATCCGAGGCAGTACGCGGGCGCCTGTCCCGTCTGCCCTGAACGGTGCTTCGCCCCATCAGTACCGAATGGTTCGTGTAACGCGTGCCTCGCCCTGCTCCGCACACCGTGA
Protein
MLTILFLLPIVVGVLSGNIPEQPRVYCGELPNTIYSCLGNPKIIQPEVSEKCNKPISECDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLSDSLKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYPRQYAGACPVCPERCFAPSVPNGSCNACLALLRTP

Summary

Pfam
PF01395   PBP_GOBP
Interpro
IPR036728   PBP_GOBP_sf        + More
IPR006170   PBP/GOBP       
IPR026509   TMEM183       
SUPFAM
SSF47565   SSF47565       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.998109
 
 
Length:
186
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.14718
Exp number, first 60 AAs:
0.14621
Total prob of N-in:
0.01175
outside
1  -  186
 
 

Population Genetic Test Statistics

Pi
172.288053
Theta
165.3538
Tajima's D
0.468563
CLR
0.565103
CSRT
0.507374631268437
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24402669 KVSDYFEQFAK 100.00 2e-11
24402669 VSDYFEQFAK 100.00 1e-10
25860555 QDNAPFVANVR 100.00 6e-06
26280517 EIDDVIAFGK 100.00 6e-06
25044914 FASMSWTK 100.00 6e-06
24402669 FASEYGFQSMPSIAVIK 100.00 6e-06
28467696 FASMSWTK 100.00 6e-06
29197581 DNPDWSAAVQNFK 100.00 6e-06
26822097 VYCGEIPNTIYSCIGNPK 100.00 0.003
26280517 CDYPDEFSGYVGAIK 100.00 0.003
25044914 DNNIIGTFDITGIPPAPR 100.00 0.003
24402669 DNNIIGKFEITGIPPAPR 100.00 0.003
28467696 DNNPEISGISWPAMKPNDR 100.00 0.003
29197581 GQFGQGTQTVFGQGQGVSQK 100.00 0.003
25860555 ICTSESEFGNAYR 100.00 0.013
26280517 IIWQEK 100.00 0.013
25044914 QYAEQIGIPFIETSAK 100.00 0.013
24093152 QWGPTDSIYGAR 100.00 0.013
24402669 QYAAAAWGVEPGAGSR 100.00 0.013
28467696 QYAEQIGIPFIETSAK 100.00 0.013
29197581 IIQPEVSEK 100.00 0.013
24402669 CNKPISECDK 100.00 0.030
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