Gene

KWMTBOMO13970

Pre Gene Modal

BGIBMGA011328

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_130_homolog_[Amyelois_transitella]

Location

Bomo_Chr23(+):14994917-15000309      View in EpiBrowser

Full name

Coiled-coil domain-containing protein 130 homolog      

Location in the cell

Nuclear   Reliability : 4.51

CDS

ATGGGCGAACGCAAAGGTCAGAATCTATACTATCCCCCCGACTATGATCCAAAAGTGGGGGGACTCAATAAGTTCCAAGGCACCCATGCTTTGAGAGAGCGTGCCAGAAAGCTCCACATGGGTATCCTTATCATTCGCTTTGAAATGCCGTACAACATCTGGTGTGACGGGTGCAATAACCATATTGGCATGGGAGTGAGATACAATGCAGAGAAGAAGAAGATAGGAATGTATTACACCACTCCGGTATACCAGTTTAGAATGAAATGTCATCTGTGTGATAATCACTTTGAAATCAAAACTGATCCAGGGAACTTGGATTATGTGATAGTGTCAGGAGCTCGGAGACAAGAAAACAGATGGGATCCCACAGAGAACGGTCAGATTGTTCCGGAAACCAAAGAAGCACAGAAAAAGTTGTTTGACGATGCCATGTTCAGACTAGAACACAAGAAGGGTGATGAGGATCTATCTAAAACTGATAAACCAAGGCTCGGTAGATTGGTAGGAAGGAATGAGGGTGTGTGGAAGGACGATTATGAAGCTAACTGCGCTTTGAGGAGAAATTTTAGGAAAAGAAGGAAAGAGCTTGAGGAATCCTCAGTTAATGATAGTATACTGCTCTCCAAGTCTTCTCTCGACATAGATCTTTTACCAGAAACCGAAGAAGACCGTAATTTAGCCAACCTGCTCTCACTAAAACCTTCAAAAAGCATAGAAGAGAAACAAATCCATGTTCGCAAGAGTATACTGAACAGTCCAGCATTACCGAGCTCAAGTGGATTGATAACTAGTTTCGGAGGTCTTAAAAAAGAAGAACAATTAAAGAAAAGCAAGATGCTAAGTAGAAATTTATTGGGGATTTCTGTTAAAAAGAAATTTAACAAAACAGAAAAAGGTAACAATGCGGACAAAGATGAAGTAGAGAAATCTAGTGTGAGTACTTTAGAAGTATGTGCAGAGAGGAATGTAAAGAATACAGAATGTGATGAACACAAGATAAATGGTGATTCAATAGAACGGCCAGAACAGTTACGTGAAATAAATACTCAAAATCGTGAGAAAGAAAAAATACAAGATAAAGAAATAAATAACAGAGATTGTGAACATCACACAAATTTAGTAGTGACCAGTGAAAAGTTAAATGATGAATGTTTGAAAGGAAAAGATGGGAATTCAAACAAAGTATCTTTGGTGGTTGATTACAGTTCCAGTGGAGATGGATCTGAGGATGATGGTTGA

Protein

MGERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNNHIGMGVRYNAEKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQENRWDPTENGQIVPETKEAQKKLFDDAMFRLEHKKGDEDLSKTDKPRLGRLVGRNEGVWKDDYEANCALRRNFRKRRKELEESSVNDSILLSKSSLDIDLLPETEEDRNLANLLSLKPSKSIEEKQIHVRKSILNSPALPSSSGLITSFGGLKKEEQLKKSKMLSRNLLGISVKKKFNKTEKGNNADKDEVEKSSVSTLEVCAERNVKNTECDEHKINGDSIERPEQLREINTQNREKEKIQDKEINNRDCEHHTNLVVTSEKLNDECLKGKDGNSNKVSLVVDYSSSGDGSEDDG

Similarity

Belongs to the CWC16 family.

Keywords

Coiled coil   Complete proteome   Reference proteome  

Feature

chain  Coiled-coil domain-containing protein 130 homolog

Uniprot

H9JP74   A0A2A4IUJ6   A0A212FHW4   A0A194QHU6   A0A0L7L3M3   A0A2H1VQ28   + More
S4PGP6   A0A194RF19   A0A1E1W8Q6   E0VGU2   A0A084VP51   A0A2M4BT55   A0A182F4N5   A0A182QCS5   A0A182RBQ7   A0A182NE72   A0A182TNE3   A0A1S4GWL3   A0A182WTC6   A0A0K8TN92   A0A0L0CAP7   A0A1I8NH00   A0A1I8PTU5   B3MI07   B4KMR7   Q16G76   A0A336LY33   B4J4J8   W8BV73   A0A1B0AAR5   Q16FM0   A0A1A9UV54   A0A1A9X9H7   A0A1B0BPN8   A0A1S4G200   Q7K0F0   B4LNG7   A0A3B0JR98   A0A1W4VI44   A0A1A9WPB3   B4QD43   A0A139WAV5   A0A087U3J5  

Pubmed

19121390    22118469    26354079    26227816    23622113    20566863    + More
24438588    12364791    26369729    26108605    25315136    17994087    17510324    24495485    17519023    10731132    12537572    12537569    22936249    18362917    19820115   

EMBL

BABH01009616    BABH01009617    NWSH01007141    PCG63068.1    AGBW02008465    OWR53307.1    + More
KQ458761    KPJ05128.1    JTDY01003172    KOB70015.1    ODYU01003774    SOQ42953.1    GAIX01003567    JAA88993.1    KQ460297    KPJ16177.1    GDQN01007688    JAT83366.1    DS235152    EEB12598.1    ATLV01014977    KE524999    KFB39745.1    GGFJ01007051    MBW56192.1    AXCN02000870    AAAB01008964    GDAI01002010    JAI15593.1    JRES01000678    KNC29310.1    CH902619    EDV38017.1    CH933808    EDW08809.1    CH478315    EAT33249.1    UFQS01000290    UFQT01000290    SSX02491.1    SSX22865.1    CH916367    EDW02703.1    GAMC01003473    JAC03083.1    EF173375    CH478414    ABM68610.1    EAT33035.1    JXJN01018148    AE013599    AY070525    CH940648    EDW62147.2    OUUW01000001    SPP73668.1    CM000362    CM002911    EDX07748.1    KMY94955.1    KQ971379    KYB25058.1    KK118002    KFM71934.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000053240    + More
UP000009046    UP000030765    UP000069272    UP000075886    UP000075900    UP000075884    UP000075902    UP000076407    UP000037069    UP000095301    UP000095300    UP000007801    UP000009192    UP000008820    UP000001070    UP000092445    UP000078200    UP000092443    UP000092460    UP000000803    UP000008792    UP000268350    UP000192221    UP000091820    UP000000304    UP000007266    UP000054359   

PRIDE

H9JP74    Q7K0F0   

Pfam

PF04502   DUF572        + More
PF10271   Tmp39

Interpro

IPR007590   Saf4/Yju2        + More
IPR019397   Uncharacterised_TMEM39       

ProteinModelPortal

H9JP74   A0A2A4IUJ6   A0A212FHW4   A0A194QHU6   A0A0L7L3M3   A0A2H1VQ28   + More
S4PGP6   A0A194RF19   A0A1E1W8Q6   E0VGU2   A0A084VP51   A0A2M4BT55   A0A182F4N5   A0A182QCS5   A0A182RBQ7   A0A182NE72   A0A182TNE3   A0A1S4GWL3   A0A182WTC6   A0A0K8TN92   A0A0L0CAP7   A0A1I8NH00   A0A1I8PTU5   B3MI07   B4KMR7   Q16G76   A0A336LY33   B4J4J8   W8BV73   A0A1B0AAR5   Q16FM0   A0A1A9UV54   A0A1A9X9H7   A0A1B0BPN8   A0A1S4G200   Q7K0F0   B4LNG7   A0A3B0JR98   A0A1W4VI44   A0A1A9WPB3   B4QD43   A0A139WAV5   A0A087U3J5  

PDB

5YZG     E-value=5.25809e-11,     Score=163

KEGG

101744669    K13115 coiled-coil domain-containing protein 130 | (RefSeq) coiled-coil domain-containing protein 13

GO

GO:0016021  

PANTHER

PTHR12111   PTHR12995  

Length:

413

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01416

Exp number, first 60 AAs:

0.00961

Total prob of N-in:

0.01113

outside

1  -  413

 

 

Pi

286.853097

Theta

167.076648

Tajima's D

2.065914

CLR

0.360663

CSRT

0.890605469726514

Interpretation

Uncertain