SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13968  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA011326
Annotation
PREDICTED:_uncharacterized_protein_LOC101746443_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.709
 

Sequence

CDS
ATGACACGAACAGCGAGCTGGTTACCCCCCGCCGAGAGCTGGTCGTCGCCGCGGGACTGTCAGGAGCCGGATACAGAAGAACTGCCTTATGGCTGGGAACAGGCTTTGGACAATCGAGGGAAATCTTATTATGTCAACCACATCAACAAGACTACAACATACGTGGCTCCGGAAGGCTGTTCCTGCGAATCTCCCCCGGCACCCAGGGACATTGTGCTCGAGCGAGACCCAGAGCTGGGCTTCGGATTCGTGGCCGGCTCCGAGAAGCCTGTCTTAGTCCGATTCGTCACTGATAATTCACCTAGTGTTGGAAAATTGGAACCCGGTGATCAGATCCTATGCGTGAATGGGGAAGACGTGAGTATGGCTGCCCGCGAGCACGTCATATCCGCAGTCAGGGCCTGTACGGAGAAGGTCACCCTTCGCGTATGCCAACCGGCCAGAGCTGGGAATCCCACGAGAAGATCCGCGCTGCTATCAGCTGCCAAGAGAGCCAGGCTACGAGCCAGACCGCCGAGGGTTCGATTCGCCGACTCAGTTCAATTGAATGGAGCTCCCATGTATCCGCCCTCAGCATTCTCGCTGGGCGACTTGTGCCTTCCGCCGATGGCGAACGTCCTCAAAGTCTTCCTGGAAAACGGTCAAACGAAATCCTTCAAATACGACACTACAACTACAGTCGCGGACGTGGTGACGAATCTTAAAGAGAAACTCTGCATCATTGCTGAAGAGCATTTCAGTCTGGTGGTGGAGCACGTGAAAAGCTTAAGAAGGAATAAACTGACTCTGCTCGATCCTAAGGAGTCTTTGGCAAGGATAGCAGCCCGTCCCGGTTCGCATAAGATGCGATGCCTGTACCGAGTGGTCTTCATGCCGACGTCTGCCGCCGACCTGGCCCAGCAGGACCTGGCGGCGCTGGACTATTTGTACCTGCAGTGCTGCAACGACGTGGCCCAGGAGAGGTTCGCCCCGGAGCTCCAGCCCGAGGTGGCCCTCCGACTAGCGGCCCTGCACATGCACCAACACGCCCTGGCCAACAATCTCTCGCCGGCCAAGTTGACTGTTAAAGCCGTCGAAAGAGAATTCGGACTGGAAAGGTTCGTGCCGAGCAGTCTATTGGAGAGCATGAAACGCAAAGAGCTCAGGAGGTTGATCGCTCATTTCCTGAAACTGAACTCGCAGATGACCGGCAGCCAGCGGCATCTGACGCAGCTGCAGGCCAAGCTTCACTATCTCGATATAGTGGGAGGACTGCCGAGCTACGGAGCGAAATGTTTCAGCAGCAGCAGACCAGAACGAGTGCTGCTGGTCTCTCCGAGGTTCGGTCTCAGTCAGATCGTGGGGAGAACTAACTCTGTGCCACAGCAAATAGCGTCCATAGACGAAGTGGAGTGCGTGCGGGTGCGGCGCGCGGGCGCATGCGCGGAACTGGCCGTGTTCCTGCGCCGCGACCGCGTGCTGGCGCTGCTCATGGATGATAGGGACGCCGCGGAGATGCCGCTCGTCATCGCCGGATATTACAAGCTGGCGACCGGTAAAGAGCTGAATGTGGAAATTGAACGGGAACCCATCACGGAGGATATAGCTCCACCCTACTTGTCCCAGCACAACGTAGTCCCAGCGAAATGGAGCTACTTACACCACGACGATCCCAACGTTTTATCGAAAAAGCATTATGCGATCTTCAGTATGCCTCCGCCCTACCATTCCACTCCGGACCAAGCTAAGAATAGCTTAGATTCCAATATGAACGCGAATATAACGAACAAAAATAGCAGCAATAACTCCAGTCCTTTGATTGGTTTTGATAATAAGTCCAGTCTACTTGGACACGATGTGCACTTCGAGAAGTGTAAGAGAGGTGAAGACTTTAGACTCTTCGATCCAAACGATCCTTGCTATCTCGACGACGGTATGGGTTTCGATCTTCAGAGCATACTCTCTATAGAGCTCTTGGAAAACGCCAGCAATAACCCAAGACTAGTCGAAGCCAAGAATGAAGAGGTGCACAGGAGAGTGGCAGAAATGCAGAAATTGGTCGAGAATTCTGAACAGTATTTAACTGAAAACTGTGATGTTTATAGTGAGGATTTATATCATGATGCGTTTATAAGAGATGAGTTAGTTGGTAGAGAGACCAGTGTCGATAATTTGGAAAGCGATACTGAGTCTAATAATAGTAGAATGTCTATGGCTGATGACGCTCCTGGCATCTTAAAACACAGCGATTCGCTTTTGCTTCTAACTGAAACTATAAATCAGGGTTTGAGTGTACTGCCTGTGTCAGAAAATGACAATAATGTTAGTGGCTTGACGGCGCGACAGTCTCAAGGGCTTAGTACCATATTAAATAATTGTGGTCTCACAGACGCTTTAATAGCTTTAAATAATGATATTTGTCATTCAGAAAGTGATAATGATTCATTATACACTCCTACGAACAGCCCCATACGGAGACATCAGAACAAAACGCCAAATAAAGCAGTTAGAACTAGTTTTGGTTTGCACAGCCCAGAGGCAATACAAGAAAATAAAGAACCGAATTTGAAAGATTACTTGAAGCAACTAAGAGAAAAGAGCAATAGAGATGAAGCGGCAAGTACAGAGTATCATCCATTTTATTATCAGGAGAGCCTAGTTGATAGTGACGTCGAGCTTATAGATTTAACTTTAATACCACCCCCACAAACTCCTGATGAATTGGATTGCGCCACACAAGTGCCTCAAATTCTCCCAGTCGTACCACCCTCTTTCGCAGATGAAAAAACAAGTTCAACAGAAAATATTTCGGATGCACCAAAAACTAGTGATTTGGAAGAATTCATCGCCAATGTTACAATACAACCGCCCACTGTTAAAGTCACGCCTGCAATAGAACTGACGCCAGAAGAGATAATGTCTTACATCATTCCGCCACCCCCAGGGTCCAATACATCTACTCTAGACAGAGATGAAGTAGGATACGCGAACCAAACCCAGATCTTAGAAGCAAAACTTGCACAAAACGTAAACGATAACACCAAAACATCAAATGGAGATGTAGTTAAGGGACAGCTGAGTGTCAGTGAAATTAGGAATATGTTTGCAGCTAAAAGTCTGAGTGAAGCTAGGAATAGTTTGTTGCTCAAAGATAAAAGTAAAACTACAACACAAACGAAATCTGATTCCCCTAAAGGTAAACGGAAGAGCGTCTCAGGTGATAAACAAGCAAACGGTAACATACACGTTATAGAATACCCGACAGTCGAAAGAAAAGGCATGTTCTCCTGCTGCAGTAAAGATAAAAATAAGTCAGATGATAGCAACGATGAGGGAGAAAAAGTTGAAACTCAAATACAGAACTCTGATTCAATGCCCGACGTGTGCGAAATCAGGCCTCCTCCGAGAAGAAAAAGTTCTGATTGCAAAAAACCTCCTGAAAGACCTCCGAAGACAGCTCCAATACCTCCTCCGAGACCTCGGTCCAATTCTTTCACGTGTCTCAATAACGAATTGACTGCGGTCGAAATCAGCACCAATCATTTCAACACGCTAAATAATAGACAATTGAACTACAAGGTTATCTGCGATATTAATGAAAAAAGTGTACAAAATCCACCCCAAGTACCTCCTAGATTAGAGAACAAGGTTCTGTCACCACCCCCACCTATATTACTACCTCCAAAGAAGCCACCTCTCCCACCAGTTCCGAGCATCGAGGTACTCAGACTGAAGACATTACAAAAAAGTTCTCCAATCAGGAACCAAGAGCAAAGACTGGCCAGTATCGGATCGCCACATTTTCAGAGAAATTTAAATAGTTATAAGAACCTTGAGAACGAAAGCCGTGCGGATGACGAAGTGCACATCCGATCGACCCCAAACTACAGTTCCATGACGCTGCAGAGTCGACACGTTAGATCGAATTCAGAAACGAAAACCACAATCTTGAAGAACAAGGAAATGTCGACAGCTTTATCTTTGTGCTCACCTCAGATGAATCGGAGGTTTAGCAATAGACCAGATATATTGAACGGCGCTCCGTGCGACCAAAAAGTCTTCAGCCCTCCTCTAGACAGAAAGACTTTTAGCTCAAGTCCTACACCAAAAGTGAATCATGTTAGGTTTAAAGAAGACGTAGTGGATGACATTCCGACTCCTCCGTCGCCGCCGACGGTGAAGTTTCCAGAGTTCCAGGCGGGGAACAATGGGCACGTGTCCATAGAGAACTTGCTATGTAAAACGGAGGTGGCCGTCGACGGGTTGCTGCAGAGGCTGCATCAGGTAGCACAGAAATGTTCGCATCAACACGCGCACGGAGGCGGAGAAGATATTGATGAAGCCAAGTTTCAGCGAGCGCGCAGCGAATTGACTTCGTGCGCTGTGTCGTTGGTTGGGGCTTCACGGACACTAGTGGGGGCGCTGGGGGTCGCGCGGGGAGGTGCGGCTCCTACTGCACTAGCCGACTGCTTGACGCCTCTCCGACGACTGACCGATCTCGCTCAGGCGCTTGGAAGGCACACATCCTCACCGCTTCAAACAAGGAATTTGGTGCTCCGTGTTCATGACGTCACGGCAGCTTTTAAGGAACTAGCCGGGCAGGAAATGGCACAAATAATTCACGAGCACAACAATAAATCTAACAAGCAGCAAAATCAAGACACGGCGTCCACTCTAGAAGGGCAGTTAGCCCTGAGGGCAGAATGCTTAGCGAACGTTCTGGCAACATTACTAAGAAGTCTGAGGGTGTTTTCGCCGTGA
Protein
MTRTASWLPPAESWSSPRDCQEPDTEELPYGWEQALDNRGKSYYVNHINKTTTYVAPEGCSCESPPAPRDIVLERDPELGFGFVAGSEKPVLVRFVTDNSPSVGKLEPGDQILCVNGEDVSMAAREHVISAVRACTEKVTLRVCQPARAGNPTRRSALLSAAKRARLRARPPRVRFADSVQLNGAPMYPPSAFSLGDLCLPPMANVLKVFLENGQTKSFKYDTTTTVADVVTNLKEKLCIIAEEHFSLVVEHVKSLRRNKLTLLDPKESLARIAARPGSHKMRCLYRVVFMPTSAADLAQQDLAALDYLYLQCCNDVAQERFAPELQPEVALRLAALHMHQHALANNLSPAKLTVKAVEREFGLERFVPSSLLESMKRKELRRLIAHFLKLNSQMTGSQRHLTQLQAKLHYLDIVGGLPSYGAKCFSSSRPERVLLVSPRFGLSQIVGRTNSVPQQIASIDEVECVRVRRAGACAELAVFLRRDRVLALLMDDRDAAEMPLVIAGYYKLATGKELNVEIEREPITEDIAPPYLSQHNVVPAKWSYLHHDDPNVLSKKHYAIFSMPPPYHSTPDQAKNSLDSNMNANITNKNSSNNSSPLIGFDNKSSLLGHDVHFEKCKRGEDFRLFDPNDPCYLDDGMGFDLQSILSIELLENASNNPRLVEAKNEEVHRRVAEMQKLVENSEQYLTENCDVYSEDLYHDAFIRDELVGRETSVDNLESDTESNNSRMSMADDAPGILKHSDSLLLLTETINQGLSVLPVSENDNNVSGLTARQSQGLSTILNNCGLTDALIALNNDICHSESDNDSLYTPTNSPIRRHQNKTPNKAVRTSFGLHSPEAIQENKEPNLKDYLKQLREKSNRDEAASTEYHPFYYQESLVDSDVELIDLTLIPPPQTPDELDCATQVPQILPVVPPSFADEKTSSTENISDAPKTSDLEEFIANVTIQPPTVKVTPAIELTPEEIMSYIIPPPPGSNTSTLDRDEVGYANQTQILEAKLAQNVNDNTKTSNGDVVKGQLSVSEIRNMFAAKSLSEARNSLLLKDKSKTTTQTKSDSPKGKRKSVSGDKQANGNIHVIEYPTVERKGMFSCCSKDKNKSDDSNDEGEKVETQIQNSDSMPDVCEIRPPPRRKSSDCKKPPERPPKTAPIPPPRPRSNSFTCLNNELTAVEISTNHFNTLNNRQLNYKVICDINEKSVQNPPQVPPRLENKVLSPPPPILLPPKKPPLPPVPSIEVLRLKTLQKSSPIRNQEQRLASIGSPHFQRNLNSYKNLENESRADDEVHIRSTPNYSSMTLQSRHVRSNSETKTTILKNKEMSTALSLCSPQMNRRFSNRPDILNGAPCDQKVFSPPLDRKTFSSSPTPKVNHVRFKEDVVDDIPTPPSPPTVKFPEFQAGNNGHVSIENLLCKTEVAVDGLLQRLHQVAQKCSHQHAHGGGEDIDEAKFQRARSELTSCAVSLVGASRTLVGALGVARGGAAPTALADCLTPLRRLTDLAQALGRHTSSPLQTRNLVLRVHDVTAAFKELAGQEMAQIIHEHNNKSNKQQNQDTASTLEGQLALRAECLANVLATLLRSLRVFSP

Summary

Pfam
PF00373   FERM_M        + More
PF00397   WW
PF00595   PDZ
Interpro
IPR036034   PDZ_sf        + More
IPR001478   PDZ       
IPR019748   FERM_central       
IPR036020   WW_dom_sf       
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR001202   WW_dom       
IPR019749   Band_41_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR035963   FERM_2       
IPR000159   RA_dom       
SUPFAM
SSF54236   SSF54236        + More
SSF47031   SSF47031       
SSF51045   SSF51045       
SSF50156   SSF50156       
Gene 3D
PDB
6QJD     E-value=0.000139607,     Score=113

Ontologies

Topology

Length:
1579
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00662
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00004
outside
1  -  1579
 
 

Population Genetic Test Statistics

Pi
246.406051
Theta
168.985912
Tajima's D
0.85694
CLR
1.078369
CSRT
0.622668866556672
Interpretation
Uncertain
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