Gene

KWMTBOMO13964  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011324

Annotation

THAP_domain-containing_protein_[Operophtera_brumata]

Location

Bomo_Chr23(+):14745218-14748682      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.179

CDS

ATGAAAACCATCACATACAAAGAACCAGATATTGAATTACTCAAACTGTTCAGTGAAGTACAAAGAATGCAAAGGCTGGCTGTCACTCTAAAGCAGAAATTAAAACACAACATGAGAATACACAATAAACAGAACAGGTTCTTGCTGAGAATTAGAGAAATAATCGAAATGAAAAAGAAGATTTTAAATCAGAAAAGAAAGAAAAAATGTAGAATTTTATTGTCTTTGCAAGACAAAATCAAGGAAGACACAAGTGGTTTGGTTCTAGCCATGCCGATGAGACAAACGGAAGACCTAAAAAATTTTGCACTTAGTGTTTATAAATATTCTCCTCAAGCATACATATACATTCGGAATACCCTGAGAACAATGTTGCCAAGTACTGAAATTTTAGAATCGTGGGTGACTGCAGGCTACCAGCCTAAAAATGTAGCTTCCAATATGATTAAAGTGGTGGCGGAACAGACTGAAACATCATTATCTTGTAAAGTGACTTTAGGTTAA

Protein

MKTITYKEPDIELLKLFSEVQRMQRLAVTLKQKLKHNMRIHNKQNRFLLRIREIIEMKKKILNQKRKKKCRILLSLQDKIKEDTSGLVLAMPMRQTEDLKNFALSVYKYSPQAYIYIRNTLRTMLPSTEILESWVTAGYQPKNVASNMIKVVAEQTETSLSCKVTLG

Uniprot

H9JP70   A0A2H1W9B9   A0A2A4K434   A0A0L7LCR9   D8VHD0   D8VHF0   + More
D8VHB0   D8VHF1   A0A194REC5   D8VHB9   D8VHD5   A0A194QIB2   D6NR32   D6NR44   D6NR47   D6NR62   D6NR80   D6NR66   D6NR36   D6NR74   D6NR57   D6NR37   D6NR31   L7X409   C3PPG8   A0A1E1VYZ7   D6NR76   D6NR43   D6NR88   A0A212FD12   D6NR51   D6NR35   D6NR71   D6NR86   D6NR59   D6NR55   S4PCK4  

Pubmed

19121390    26227816    20442862    26354079    20140239    23674305    + More
22118469    23622113   

EMBL

BABH01009605    ODYU01007143    SOQ49660.1    NWSH01000204    PCG78440.1    JTDY01001631    + More
KOB73298.1    GQ986367    GQ986368    GQ986369    GQ986370    GQ986371    GQ986373    GQ986374    GQ986375    GQ986376    GQ986377    GQ986378    GQ986379    GQ986380    GQ986381    GQ986383    GQ986384    ADI82554.1    GQ986387    GQ986389    GQ986391    GQ986393    GQ986395    GQ986396    GQ986397    GQ986398    GQ986399    GQ986400    GQ986401    GQ986402    GQ986403    GQ986404    GQ986405    GQ986406    ADI82574.1    GQ986347    GQ986348    GQ986349    GQ986350    GQ986351    GQ986352    GQ986353    GQ986354    GQ986355    GQ986357    GQ986358    GQ986359    GQ986360    GQ986361    GQ986362    GQ986363    GQ986364    GQ986365    GQ986366    ADI82534.1    GQ986388    GQ986390    GQ986392    GQ986394    ADI82575.1    KQ460297    KPJ16183.1    GQ986356    ADI82543.1    GQ986372    GQ986382    GQ986385    GQ986386    ADI82559.1    KQ458761    KPJ05134.1    GU583216    GU583217    GU583218    GU583223    GU583224    GU583225    GU583233    GU583234    GU583236    GU583256    GU583257    ADF82063.1    ADF82064.1    ADF82065.1    ADF82070.1    ADF82071.1    ADF82072.1    ADF82080.1    ADF82081.1    ADF82083.1    ADF82103.1    ADF82104.1    GU583228    GU583229    GU583230    GU583247    GU583267    GU583269    GU583273    GU583279    GU583280    GU583282    GU583286    ADF82075.1    ADF82076.1    ADF82077.1    ADF82094.1    ADF82114.1    ADF82116.1    ADF82120.1    ADF82126.1    ADF82127.1    ADF82129.1    ADF82133.1    GU583231    GU583232    GU583237    GU583238    GU583240    GU583242    GU583244    GU583248    GU583249    GU583251    GU583252    GU583253    GU583259    GU583261    GU583263    GU583265    GU583266    GU583268    GU583274    GU583275    GU583276    GU583277    GU583278    GU583283    GU583284    GU583285    ADF82078.1    ADF82079.1    ADF82084.1    ADF82085.1    ADF82087.1    ADF82089.1    ADF82091.1    ADF82095.1    ADF82096.1    ADF82098.1    ADF82099.1    ADF82100.1    ADF82106.1    ADF82108.1    ADF82110.1    ADF82112.1    ADF82113.1    ADF82115.1    ADF82121.1    ADF82122.1    ADF82123.1    ADF82124.1    ADF82125.1    ADF82130.1    ADF82131.1    ADF82132.1    GU583246    ADF82093.1    GU583264    ADF82111.1    GU583250    GU583254    ADF82097.1    ADF82101.1    GU583220    ADF82067.1    GU583258    GU583262    ADF82105.1    ADF82109.1    GU583241    GU583245    GU583281    ADF82088.1    ADF82092.1    ADF82128.1    GU583221    GU583222    ADF82068.1    ADF82069.1    GU583215    ADF82062.1    KC469894    AGC92745.1    CU681835    CU672275    CAY54176.1    GDQN01011098    JAT79956.1    GU583260    ADF82107.1    GU583227    ADF82074.1    GU583272    ADF82119.1    AGBW02009117    OWR51636.1    GU583235    ADF82082.1    GU583219    ADF82066.1    GU583255    ADF82102.1    GU583270    GU583271    ADF82117.1    ADF82118.1    GU583243    ADF82090.1    GU583239    ADF82086.1    GAIX01004151    JAA88409.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More

PRIDE

H9JP70   

Pfam

PF05485   THAP

Interpro

IPR006612   THAP_Znf        + More
IPR038441   THAP_Znf_sf       
IPR026516   THAP1       

Gene 3D

3.30.40.180    

ProteinModelPortal

H9JP70   A0A2H1W9B9   A0A2A4K434   A0A0L7LCR9   D8VHD0   D8VHF0   + More
D8VHB0   D8VHF1   A0A194REC5   D8VHB9   D8VHD5   A0A194QIB2   D6NR32   D6NR44   D6NR47   D6NR62   D6NR80   D6NR66   D6NR36   D6NR74   D6NR57   D6NR37   D6NR31   L7X409   C3PPG8   A0A1E1VYZ7   D6NR76   D6NR43   D6NR88   A0A212FD12   D6NR51   D6NR35   D6NR71   D6NR86   D6NR59   D6NR55   S4PCK4  

KEGG

101744096    K23203 THAP domain-containing protein 1/3 | (RefSeq) THAP domain-containing protein 1-like

GO

GO:0003677  

PANTHER

PTHR46600:SF3   PTHR46600:SF1  

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01389

Exp number, first 60 AAs:

0

Total prob of N-in:

0.31333

outside

1  -  167

 

 

Pi

147.853527

Theta

174.405044

Tajima's D

-1.133159

CLR

150.664423

CSRT

0.115244237788111

Interpretation

Uncertain