Gene

KWMTBOMO13962  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011281

Annotation

trafficking_protein_particle_complex_subunit_5_[Papilio_xuthus]

Location

Bomo_Chr23(-):14729066-14731237      View in EpiBrowser

Full name

Trafficking protein particle complex subunit 5      

Location in the cell

Mitochondrial   Reliability : 2.036

CDS

ATGAACATGTCCTCCAGTCGTTCGAAATCATCAATATTAGATAAACCATTACGAAAAGGGAAAGGGGAGGTCTCTTTAGCCTTTTATGCCCTTTTATTTTCTGAAATTGTTCAGTATAGTCAGAATCGATCGCATTCGATACAAGATCTACAGTTTAAATTGTCTGAAATCGGACAAGATGTGGGCACGAGACTGCTCGACTTGTATTTTGTGAGAGAGAGAAATAGCAAACGTGAGATAAAACTGCTGAATATGTTACTGTTTATCAAGTCTACTTTATGGAAGGTGCTTTTTGGTAAAGAAGCTGATAAACTGGAACATGCAAATGATGATGAAAGGACCTACTATATTATCGAGAAAGATGCTCTTGTAAATAAGTTTATAAGTGTACCAAAAGACAAGGGTTCATTAAACTGTGCCATCTTCAATGCTGGCATCATTGAAGCTGTTTTAACTAGGAGCGGATTTCCAGCAAAGGTGACAGCACACTGGCACAAGGGAACAACATACATGGTCAAGTTCGATGATTCAGTAATCACCAGAGACAAAACATTGGATGATCGTTAA

Protein

MNMSSSRSKSSILDKPLRKGKGEVSLAFYALLFSEIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFVRERNSKREIKLLNMLLFIKSTLWKVLFGKEADKLEHANDDERTYYIIEKDALVNKFISVPKDKGSLNCAIFNAGIIEAVLTRSGFPAKVTAHWHKGTTYMVKFDDSVITRDKTLDDR

Description

May play a role in vesicular transport from endoplasmic reticulum to Golgi.

Subunit

Part of the multisubunit TRAPP (transport protein particle) complex.

Similarity

Belongs to the TRAPP small subunits family. BET3 subfamily.

Uniprot

H9JP27   I4DLB7   A0A2A4K3E2   A0A2H1W9Z2   L7X1T5   S4NX29   + More
C3PPG5   A0A212FD17   A0A0K8TNL6   A0A1L8DVY4   A0A067R3H0   A0A2J7PV46   A0A1B0CQT9   A0A1Y1L632   A0A182RSV3   A0A182WD17   A0A182YCA7   A0A0C9RRV8   A0A232F1Q5   K7JAW6   A0A224XLC0   A0A0V0G8Z6   A0A1B6CK81   A0A182N3P7   D7ELH8   W5JII0   A0A0P4VRR0   R4FKT2   A0A182P1D9   A0A182V5Z7   A0A182TTV3   A0A182X080   A0A182KTB6   Q7PDE6   A0A182HPJ6   A0A182JUN8   A0A023EIG4   A0A310SDT0   A0A2M3ZD55   A0A2M4AXT1   A0A182FTW4   A0A2M4C0E5   A0A182QKP5   A0A195DT05   A0A151JT55   E2AMW5   F4W7F0   A0A195ATC4   A0A158NPU4   A0A151X8N1   A0A1B6M110   A0A1Q3FGG7   A0A0J7KXI0   U5EY29   E2BQG5   Q17H04   A0A1B6H8B6   A0A1B6FDZ1   B0WI08   A0A3L8DA56   A0A026X218   A0A182IVG2   A0A088ARP0   A0A2A3E3M6   A0A1A9W8E5   C3Z0P3   A0A0M8ZWQ8   B3ME28   A0A0M4E5Y4   A0A1B0G7V2   A0A1A9VQ68   Q291B6   B4GAY3   A0A1W4UHK8   A0A0J9RE19   B4P7N8   B4HRP2   B3NQT0   Q7K2Q8   A0A154PA58   A0A2R7Y1Y8   A0A2H8TZ62   A0A0L7RD14   C4WVR1   B4MNS7   B4LM74   B4KNN6   A0A2S2PRP6   A0A3B0J696   A0A034VQD3   A0A0A9YTL2   A0A151I6Y8   B4J6K8   Q5TMY9   A0A1I8MAE4   A0A0A1XGY7   A0A1I8P538   E0VWU3   R7UIT4   A0A1S3JI87  

Pubmed

19121390    22651552    26354079    23674305    23622113    22118469    + More
26369729    24845553    28004739    25244985    28648823    20075255    18362917    19820115    20920257    23761445    27129103    20966253    12364791    14747013    17210077    24945155    20798317    21719571    21347285    17510324    30249741    24508170    18563158    17994087    15632085    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    25401762    26823975    25315136    25830018    20566863    23254933   

EMBL

BABH01009604    AK402085    KQ458761    BAM18707.1    KPJ05137.1    NWSH01000204    + More
PCG78438.1    ODYU01007143    SOQ49662.1    KC469894    AGC92743.1    GAIX01009239    JAA83321.1    CU681835    CU672275    CAY54173.1    AGBW02009117    OWR51634.1    GDAI01001644    JAI15959.1    GFDF01003629    JAV10455.1    KK853019    KDR12406.1    NEVH01020989    PNF20201.1    AJWK01024033    GEZM01063659    JAV69034.1    GBYB01011280    JAG81047.1    NNAY01001286    OXU24482.1    AAZX01011201    GFTR01003140    JAW13286.1    GECL01001497    JAP04627.1    GEDC01023409    JAS13889.1    DS497866    EFA12180.1    ADMH02001378    ETN62705.1    GDKW01001473    JAI55122.1    ACPB03017117    GAHY01001713    JAA75797.1    AAAB01008986    EAA00628.5    APCN01003261    GAPW01004701    JAC08897.1    KQ760869    OAD58759.1    GGFM01005639    MBW26390.1    GGFK01012259    MBW45580.1    GGFJ01009645    MBW58786.1    AXCN02001102    KQ980487    KYN15922.1    KQ982014    KYN30636.1    GL440936    EFN65239.1    GL887844    EGI69823.1    KQ976745    KYM75473.1    ADTU01022754    KQ982409    KYQ56722.1    GEBQ01010372    JAT29605.1    GFDL01008398    JAV26647.1    LBMM01002308    KMQ95003.1    GANO01002225    JAB57646.1    GL449769    EFN82023.1    CH477254    EAT45920.1    GECU01036853    JAS70853.1    GECZ01021323    JAS48446.1    DS231941    EDS28090.1    QOIP01000011    RLU17003.1    KK107021    EZA62332.1    KZ288427    PBC25856.1    GG666569    EEN53923.1    KQ435814    KOX72665.1    CH902619    EDV37573.1    CP012524    ALC41791.1    CCAG010021503    CM000071    EAL25196.1    CH479181    EDW32085.1    CM002911    KMY93834.1    CM000158    EDW91064.1    CH480816    EDW47906.1    CH954179    EDV55990.1    AE013599    AY060730    AAF58209.1    AAL28278.1    KQ434856    KZC08723.1    KK854080    PUA16085.1    GFXV01007798    MBW19603.1    KQ414614    KOC68852.1    ABLF02013830    AK341629    BAH71981.1    CH963848    EDW73766.1    CH940648    EDW60952.1    CH933808    EDW10021.1    GGMR01019523    MBY32142.1    OUUW01000001    SPP75292.1    GAKP01014283    JAC44669.1    GBHO01009181    GBRD01000935    GDHC01001519    JAG34423.1    JAG64886.1    JAQ17110.1    KQ978456    KYM93894.1    CH916367    EDW00911.1    EAA00657.4    GBXI01004102    JAD10190.1    DS235824    EEB17849.1    AMQN01008362    KB302959    ELU03713.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000007151    UP000027135    UP000235965    + More
UP000092461    UP000075900    UP000075920    UP000076408    UP000215335    UP000002358    UP000075884    UP000007266    UP000000673    UP000015103    UP000075885    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000075881    UP000069272    UP000075886    UP000078492    UP000078541    UP000000311    UP000007755    UP000078540    UP000005205    UP000075809    UP000036403    UP000008237    UP000008820    UP000002320    UP000279307    UP000053097    UP000075880    UP000005203    UP000242457    UP000091820    UP000001554    UP000053105    UP000007801    UP000092553    UP000092444    UP000078200    UP000001819    UP000008744    UP000192221    UP000002282    UP000001292    UP000008711    UP000000803    UP000076502    UP000053825    UP000007819    UP000007798    UP000008792    UP000009192    UP000268350    UP000078542    UP000001070    UP000095301    UP000095300    UP000009046    UP000014760    UP000085678   

PRIDE

H9JP27    Q7K2Q8   

Pfam

PF04051   TRAPP

Interpro

IPR016696   TRAPP-I_su5        + More
IPR007194   TRAPP_component       
IPR024096   NO_sig/Golgi_transp_ligand-bd       

SUPFAM

SSF111126   SSF111126       

CDD

cd14943  TRAPPC5_Trs31

ProteinModelPortal

H9JP27   I4DLB7   A0A2A4K3E2   A0A2H1W9Z2   L7X1T5   S4NX29   + More
C3PPG5   A0A212FD17   A0A0K8TNL6   A0A1L8DVY4   A0A067R3H0   A0A2J7PV46   A0A1B0CQT9   A0A1Y1L632   A0A182RSV3   A0A182WD17   A0A182YCA7   A0A0C9RRV8   A0A232F1Q5   K7JAW6   A0A224XLC0   A0A0V0G8Z6   A0A1B6CK81   A0A182N3P7   D7ELH8   W5JII0   A0A0P4VRR0   R4FKT2   A0A182P1D9   A0A182V5Z7   A0A182TTV3   A0A182X080   A0A182KTB6   Q7PDE6   A0A182HPJ6   A0A182JUN8   A0A023EIG4   A0A310SDT0   A0A2M3ZD55   A0A2M4AXT1   A0A182FTW4   A0A2M4C0E5   A0A182QKP5   A0A195DT05   A0A151JT55   E2AMW5   F4W7F0   A0A195ATC4   A0A158NPU4   A0A151X8N1   A0A1B6M110   A0A1Q3FGG7   A0A0J7KXI0   U5EY29   E2BQG5   Q17H04   A0A1B6H8B6   A0A1B6FDZ1   B0WI08   A0A3L8DA56   A0A026X218   A0A182IVG2   A0A088ARP0   A0A2A3E3M6   A0A1A9W8E5   C3Z0P3   A0A0M8ZWQ8   B3ME28   A0A0M4E5Y4   A0A1B0G7V2   A0A1A9VQ68   Q291B6   B4GAY3   A0A1W4UHK8   A0A0J9RE19   B4P7N8   B4HRP2   B3NQT0   Q7K2Q8   A0A154PA58   A0A2R7Y1Y8   A0A2H8TZ62   A0A0L7RD14   C4WVR1   B4MNS7   B4LM74   B4KNN6   A0A2S2PRP6   A0A3B0J696   A0A034VQD3   A0A0A9YTL2   A0A151I6Y8   B4J6K8   Q5TMY9   A0A1I8MAE4   A0A0A1XGY7   A0A1I8P538   E0VWU3   R7UIT4   A0A1S3JI87  

PDB

2J3W     E-value=1.31733e-63,     Score=612

KEGG

101743795    K20280 trafficking protein particle complex subunit 5 | (RefSeq) trafficking protein particle comple

GO

GO:0030008   GO:0005794   GO:0048193   GO:0005783   GO:0006888   GO:1990071   GO:1990072   GO:1990070   GO:0016192   GO:0005840   GO:0006412   GO:0004888   GO:0007166   GO:0016020   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR20902  

Subcellular location

  

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.57588

Exp number, first 60 AAs:

0.14352

Total prob of N-in:

0.28243

outside

1  -  188

 

 

Pi

190.540465

Theta

184.607013

Tajima's D

-0.719679

CLR

1172.401902

CSRT

0.193240337983101

Interpretation

Uncertain