Silkworm Genome Informatics Database

Gene

KWMTBOMO13955

Pre Gene Modal

BGIBMGA011320

Annotation

PREDICTED:_integrator_complex_subunit_7_[Bombyx_mori]

Location

Bomo_Chr23(+):14660748-14673066 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.271 PlasmaMembrane Reliability : 1.143

CDS

ATGGTATGTATCTCGGGGCTGGAGGAGGCGGCGGCGGGGTGGGAGGTGGCGGGCGGGTGGGGCGGCGCGGGAGGTGCGGGGGGCGCGTGGTGCGCAGCGGGGTGCGCGGGGTGTGCGTGCTGCGCGCCGCTGCCGGCCGCGTGGCTGCGGGCGCGGGCGGCGGCATTGCTGGCCCTGGCCCGCGCGGCCGCCGCGGCGCGTGCTCTTTGCTCGCAGCCGCCGCCAGCCATCGCGCAAACCATAGCCCAGGCGGGGCGCGACCCCGCGCTGGCGGCGGGCGCGAGTGCGGGCGCGCTGCGGGGCGCGGCGCGGGCGCTGGGTGCGGTGGCGCGGCGCTACGCCGACATGGCACGCACCGCCTTTCACGCCGACGACTCCACGCTCAGACACTTGCAAATCTCGCAGCACACGTACACGCAGCTGTCGCAGCTGCTGGACTCCATCGCCAGCAGCCAGCCGGAGCGCGAGCTCACGCTGCCGGAGCCGCGGGCCACCAGCCTAGACGAGGCCGTGGCGCTGTCTCCCAGCAAGGCCATCGCGGCCATAGCGAGCAAGCTTGCCGAATTCCCCATGACCACACCCGGGATCACACACAGGCACGCGGAGGCGGTGGTGTGCGCAGTGCGGGCGGCGGGCGCGGGCGCGGTGTGGTCCCGGGGTGCGTGGTCGGGGCGCGGCACGGGCGCCGTGTGCCGCGTGTCCGTGTCGCCGGCGTGGCGGCCCGCGCCCGCGGACCACGCCGCCGCGCTGCCGCTGTCCCACCGCCTGGCGCTCAAGCTGGAGGGCGTCATACTGCCCGCGCGCCCGCTCGCCAAACGTCAGCAGCAGCGACAAGTTAAAGGCGTCCAAATCACGGTGACCGCCACCCAGCATCCGAGGACCAACGAGAAGACGGTGGAGCTGACCAACGTGCCGCCGGTGCTGACCGCAGTGCAGACGGTCGCGCCCGTCCGGGACTTCTTCTCCGCCCAGCAGCTGGTCAGCGTGCCCAACCCGGGACTGTACACGGTGGCCGTGGAGTCGGCCTTCGTGGACGAGCGCGGCCAGCTGTGGAACACCGGCCCCAGGACTTCGATTGTCATCAAGGCTCACGACGATCCGAGTCCGAAGGTGTCCAATTCGCACAACAGCAGAGGAAGAGCGGCGACAACAATGAGCAGCGCTCTGGATCCAGACCTGACACTGATTACACTATCGCAGTGGAATGACCAAAAATTGCGACGCATTGCCGATAACGGCGGCGGTGAGTGCGCGGCGCCCCGCACGCCACAGTGCGCGCCCGGCCGTCGCCGCCACGAAATGTTACCGATTTTCATTTTACTATACGTCTCATCCGCCAATTCCCTCTGCGATGGCACGTGCTTCTGTAACTATAAACACGCAGATCAAGACTACATGGGCGAAACAGTCGACTGCTCCCACAGAAACGTGGACGCCAAGGTCAATTTAACGTTACCCAAAACGATATATTCATTAGATTTGTCATACAATAATATAACATCGATAGATTCATCAATTATATTCGATTCATCAACTATGGTCGAGCTGTATCTGAATCGCAATCATATTGTCAATCTAAACTGTTCCTTGGCGTTACCTTCGTTGAAGAAGTTGGACTTAAGCGACAATTCAATTAGCAAAATCGACGGACACGTTTTCGATAAACTAAAGAATCTAGAATATTTAAATTTGGCCAACAACAAATTTACGTCTCTTGATAAATTGACTTTTCATCGATTGACGAATTTGAAGGAAATCGTTTTAGACAACAACGACATAGGCGAGGAGCTACGACGAGTGAATTTGTTCGACAGAAGCGGCTTGGGTTTGACCGCGAAGATCAGGTCGCTCAGCATTCGCGGCGTGAAGTTAAATCGAGTGCCAGACAACTTCTTTGTCGACGCCTACGATATTAGAAAACTCGTTATATCAAACAACAATATAACTGACGTTTTCGAATTTCCATTCACTTTAGAGTACTTAGATATCTCAGATAACCCCATTGAAATTATATCCAGTGAAGACTTCGCAGATCTAGCCGGATTGAAAGTACTCAAACTCAATAATTTGAAAATTACCGAAATATCCGGCTACATGTTCGAACCATTACATTCTTTGACGTCTTTAGAGCTGGAACGGAACATGAATCTGACGAAATTCGATGCGTTTGCTTTCGGCAAAGAAGTCCTAGAAGATGCCGACTATTTCAATTTGGAAGAGTTGTCCGTGCGAGGGTCGAGATTAACCACACTGGACAAGAGATTGATGGAGCCATTTGGAAGACTCATAAAGCTAGACTTACAAGGAAACGCTTGGTCGTGTGACTGTAAATTATATTGGATCAAACAATTGCAAATACCTGAAGAATACAGAGACCATGTGAGATGTTTCACACCGAAGTCTCTACACAACGCAAGGGCATTGGAACTTGACGCCAAATACTTTTCGTGTAAAATAGGAAAAGGCCGTGTTGGCGGCGTCGTAGCCGTGGTCACATTCTGCGTCATATTGGCTATTATAGCGCTTTGGATATTCATATACTTGCCGAGGTCACAAAGCAGAGGGAATGCCATAAGGCAGATCCATGTTTCTACAGCTACGTACAGTATTCTGCCGGGAACTATGCCGATAGGAACCATTCCCATGCACGACTTCGGTAGTCGCTAA

Protein

MVCISGLEEAAAGWEVAGGWGGAGGAGGAWCAAGCAGCACCAPLPAAWLRARAAALLALARAAAAARALCSQPPPAIAQTIAQAGRDPALAAGASAGALRGAARALGAVARRYADMARTAFHADDSTLRHLQISQHTYTQLSQLLDSIASSQPERELTLPEPRATSLDEAVALSPSKAIAAIASKLAEFPMTTPGITHRHAEAVVCAVRAAGAGAVWSRGAWSGRGTGAVCRVSVSPAWRPAPADHAAALPLSHRLALKLEGVILPARPLAKRQQQRQVKGVQITVTATQHPRTNEKTVELTNVPPVLTAVQTVAPVRDFFSAQQLVSVPNPGLYTVAVESAFVDERGQLWNTGPRTSIVIKAHDDPSPKVSNSHNSRGRAATTMSSALDPDLTLITLSQWNDQKLRRIADNGGGECAAPRTPQCAPGRRRHEMLPIFILLYVSSANSLCDGTCFCNYKHADQDYMGETVDCSHRNVDAKVNLTLPKTIYSLDLSYNNITSIDSSIIFDSSTMVELYLNRNHIVNLNCSLALPSLKKLDLSDNSISKIDGHVFDKLKNLEYLNLANNKFTSLDKLTFHRLTNLKEIVLDNNDIGEELRRVNLFDRSGLGLTAKIRSLSIRGVKLNRVPDNFFVDAYDIRKLVISNNNITDVFEFPFTLEYLDISDNPIEIISSEDFADLAGLKVLKLNNLKITEISGYMFEPLHSLTSLELERNMNLTKFDAFAFGKEVLEDADYFNLEELSVRGSRLTTLDKRLMEPFGRLIKLDLQGNAWSCDCKLYWIKQLQIPEEYRDHVRCFTPKSLHNARALELDAKYFSCKIGKGRVGGVVAVVTFCVILAIIALWIFIYLPRSQSRGNAIRQIHVSTATYSILPGTMPIGTIPMHDFGSR

Uniprot

NA

ProteinModelPortal

NA

PDB

3ZYN E-value=6.26062e-16, Score=209

KEGG

101746016 no KO assigned | (RefSeq) TLR4 interactor with leucine rich repeats-like

GO

GO:0005515 GO:0004930 GO:0007186 GO:0016021 GO:0004888 GO:0007166 GO:0016020 GO:0004713 GO:0016491 GO:0015930

Length:

888

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

38.39684

Exp number, first 60 AAs:

0.39213

Total prob of N-in:

0.01470

outside

1 - 825

TMhelix

826 - 848

inside

849 - 860

TMhelix

861 - 883

outside

884 - 888

Pi

231.329652

Theta

162.254846

Tajima's D

1.014701

CLR

0.165901

CSRT

0.660916954152292

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics