SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13951
Pre Gene Modal
BGIBMGA011318
Annotation
PREDICTED:_adhesion_G_protein-coupled_receptor_A3_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.063
 

Sequence

CDS
ATGTCGTTGCTATGCGCAAACGGGGTGCTCTCATACTGTCCCTCACTGTGTGTATGCAAAAGTAATAAGGCAGGCGAGGGGGCATCAGCGGAACCACTGCCGGGAGAACTCAAGCTCAAGTGCGGTGGAAGTCCAGCACCGATAACTGAACTTAAGGAAATCGACCTGAGCAAGCTGTGGACCATTGTAGTTAGTCTTAATTTATCCGGCAATGCTATTTCTACATTGTCGAGAGAGCTGTACTTGCCAAATCTACAGAAACTAGATTTAAGCAGAAACCAGATATCATTAATAGAATCGGATGCATTTTACAATATGACAGCTTTGCAAAAGTTAGACCTATCGCAGAACCACATCAGTAATGTGTACAAGGAAATGTTTAAAAGCTTAATCAATTTAGAGAGATTGATCCTGGCACAGAATCAGATATCTGTAATGGCATCGGGCACTTTTGATTATCTAGTTGCATTGAAGCATTTAGACATAACAGATAATCCTCTTATTTGCAACTGTGACTTACTTTGGGTGAGTGACTGGGTACGAATCACCAGGGTAAAACTTGTGGGTAATCCAAAATGTGCCTTCCCCGAGCACAAGACAAATACAACTATAAAAAAACTGAAGATATCATTAGATTTAAAAGCCTGCAGTAATGCTTTACCCATGACTTCATTGATCGCCAAGCCGAGCCACGATCAAGTAGTTTTCGAAGGGGATTCCTTGGTCTTGACTTGCAATGCACCATTCGCATCAGGCCTAATTAAATATACAGTTAAATGGGTGCACCCATTGCTTGAAATATGTGATGTTAATGTTACTTACACTGACATACAAGAGGAAGCAGTTGCTGAGACCACAATATATTTCTCGAATATAACTAACCATCATGCAGGAAACTGGACATGCATGTATAGTGACCAAAACAATGTGTACCACAACTACACCATAAATGTTTATGTGATATCAAATTCGACACAGTTCTGTGAGATTAAACACACAATGACAAATAAAGGATTGTACTCATGGCCACAGCTACTACTGAACCGCACATCTTCAGTACCGTGCCGCAGTGGAGAAGGCATGGCACACAGATATTGCCATGGGAATGGTACTTGGGGTGAAGTGGACACATCCGAATGTGCATACATAAGTAATGTGACGAAATTGCTTCAGCAGTTTGCACTGTTGAATGTGAGTTTAGTTCAGTATTCAGCAGTGAATGCTACGGAGAGACTGGCAATGTTGATACAGGAGAAGACATATCCTTTGGCTGAGATTACAGACCCAGATGATGTTATGTTCATAGCACGAGCAATTAGGAATTACATGCAGTATATTGCTGAAGAAAGAGATCTGGGTTCCGCATTATTAGATGTGATAAGTGCAGTGATGAACATATCAATGCCAGTTCTCGCCAAAGCCGAGACCAAGTACGGAGCATGCACAGATATGATGAATGCTGCAGAGGATATATCCGCTTATATTAACAATGTTCACGGACAAAAGTCAAATTTAGCGATAGAACGTTTTCGAGTGAGCGAGGGCTTCGGTGGAGCGACGTGCGTGTGGTACAGCGGGGGCGAAGTCCGAGGGGCAGAGCCTCCGAGACTGCACTGCACGGCCACCAACAGAACCGTTGCGCCCCTGTTCACACTATCCGACACGCTCATACATGCAACTGTGCAGATACCCCAATCTCTGATCTTCAGCACGACAGAATCTGGTGCCCTCGTTCAGATGAAGCCTTCGGACCTGGTGGTGTCGGTGTACGAGCACGCGGCGCTGTTCCCGCTGCTGCCGACCCTGGACGACGACGCCACGCTCACGGGCCACCGGTCGAAGGACTATTATGGCAGGAGCACCAAGCGGGAAGACATGAACATCGAGATCACCTCACCGGTTGTCGGATTTCAACTCAAGGGTACGGAGTGGTCGGGCGAGCTAGTGGAGCCAGTACTGGCGGGAGTGCGCGCTCGGCCCGGCGCTCGCACGCACGTAGCACTCTGGGACGCGCACACTCGCCACTGGACGCTTAACCATACAGATTGTCGCATATCGCACGCAGTGTCCGAGATGGTGATCATAAGCTGCAGCCGGCTGGCGCGCGTGGGGCTGGTGCAGAACGTGGAGACCGGCATCTACGGCGCCCGCACGGACGGCGCGCGCTTCAAGGTGTCGCACCCCGCCGTGTACGTGGGCAGTCTGCTGCTGGGCGGCTGCCTCGCCTGCGCCGCCATCACCTACGCCACGTGCCACGCCGACATACTGATGCCGAACAAAACCAAGCACGCCCTCGTCAACACCTGGGTGGCCATCTGTCTGCTCTGCTTCATGTACACCCTCGGCATCTACCAGACTGAGAACGTCAGGCTGTGCCAAGCGCTGGGACTGCTCATACACTACCTGTCGCTGTGCTGCTTGCTGTGGATGTGCGTGTCGGCCAGCAACATGTACAAGTGGGTGACGCGGGCCGACGGGCCGCCCAGGACGCCCGAGGACGAGCTACCGCCGGACGCGCCCGCGCACAAGCCCATACTGGGACTGTACCTGGTCGGCTGGGGCATAGCGCTCATAGTCTGCGGCATCTCCGGAGCCGTTAACATCAAGGACTACGCCGGCTACTCGCAGTGCTTCCTCAGCACGGCCCCGGCGCTGAGCGCGCTGTTCGTGCCCGGCGGCATCCTGTTGATGTTCCTGTTGGTGCTGTTCGCGCTCATACGCTGCACCATCCGGAACATGAACGTGCAGCTGTCGGAGGGCACGCAGGCCACCGAGAACGTCGACCTGGAGATGTGGGAGCCGCAGGTGCATGACCGCGCGGAGAGGAGGAGCGTGAAGTCGGCGCCGGACTCGGAGAGCGAGGACGCGGAGCACTCGCCCATCGTGCAGCTGCGGGCGCACGTGATCGTGGCGTGTCTGTACGTGGCGGTGTGGGCGTGCGGCGCCGTGGCCGTGTACCGGCCGCTGCCCGCCTACCTGCCGTACCAGGAGGACATCTGCAGCATCGTGTACGCCGTGTGCGCCACCGTGCTCGGCACCTTCGTGCTGTTCTTCTACGGCATAGCGCGCAGTGACGTCAGGGCGCAGTGGGCACTCGTGCATTGCTATTTTCAAAAAAGTAAACAGTGCTGCAGAAACAGGAGCGTGTTCGACGCGAACCAGCGCAACGTGCCCGCAGATCCCTCCGGAGCCGCCGCCCCCGCACCCCTGCCGAACGACAACCGGTCGCGGTCCGGCAGCCGGAGCTCCGGCAGGACCAACCCCAAGACCAACAACGGCGGCACGTACAAGGCGGGCGCTGAACTCAACGGGCAGACTCTACACAAGGACGTGTTGAAGAACACGAATGGAAAAACTCCGAACATAAACCTGGTTGTGCTGCACCGCCAACAGTACCGGTCCAACAACTCCATGCTCACGTACCCCGACGCCAGCACCGTGGCCCCCGATATATTCTACAACCCCAACCAGATGAATGTCGCCAAGAAGTTCTTCAAGAAGCAACGGCAGAACATGAAGAGGAACTGCCTTGAGTTGCCGACGAGAAATGACTACGACAACGACTCGCACTTCTCGCTGCCGCTGCCCACTAAGGAGGCGTACAGCGGGATGGCCAACATAATCAACTCTGGGTCCAAGGTCAACAATACGAACATACACGTTGAGCGGTCCAACAATGGCATCAAGGAGACCCGCAACGTCGCCAACCCGAACCTTCTGGAAGACGAACACAAGGACTACAAAAGCTACACGAACGATAAGAAGACTTGGAATAAAAACGAAGATCCGAAAACGGACAGAAGCCGAGTGATGAATATTTATACCAATGTGCCAGAGACTCAAGTGCCGCAGCATCAGGTCATCAAAGCGAACGCGCCCAGCAACCTCAATGCTCAGCGGAGCAGCGTATCGGAGGAGTGCCTGCAGAGTCACGCCGACCGCCCGGAGATGAGGACCATATCGCAGCAGTGCAGTCTGGAGTACAGCTCGGCGTCGGAGATAGCGATGCCGCACACCTGCTCCGACCAAACATTGAACACGCACTCGGAAATGACGTCACTGCAGGAAACGCACAGCGCTTTGTGCTCCACCAACGAGATCACCGACACGGAGAGCTTCGGCCAGTACATAGATTACATGCAGCCCAACAAGGGCCAAGACGGGAAGGAGAACAAGGACAAGTCGCTGCAGGACATATCGGAGGAATGCACCATGAATAGCGACGACGCCGCTCGCTCCGGGAGTCCGCAGCATCCGGACGCCGGGGAACTCGACAATCTGCTTCAGGATCCAGAGCTAGGGTCGAAAGATAAACTGGACGACGACAAAGACACGTTTTTCTTGGCGAAAACAACGTACGACTTCGAAACGTGCAGCACGAACGCGAGCGAACAGGGCTTCGAGAACGACAGTGACATTTACTGTCCCAACTACCAGATGTCCGAAGTGAGCATACGGAGCCACGGCCTGTACGCGCCCTCCCCCTCGTCCATGTGCCCAAACGAAATAAGCTTCAGCACAGAGGACGTTTCTAACATAGAGAACCAGTACGTCAACTACGATCCCGGATGGCGGAAAACGATAAAGAGCAATCCGAAATTGGGGAAGTACGTGCCCACTCCCGCGCTCAGCTGTCCCGATGTCAACAGGGACAGCAGCCCGGTGTCGTTCGCGAGCGAGATAGACGAACTGTACACTCAGATCACGAGTAGAGAGCGAGACAAGGACAGAATTAGTCGGAAGGACACCTGTTTAGATGTGACTTTGAACAGTGACGTCACGCTGCGGCCTGACAGTGACAGTTGTGCGAGCGAGGGCGAAGGTCGCGGGGAAACCGCCCTGTGA
Protein
MSLLCANGVLSYCPSLCVCKSNKAGEGASAEPLPGELKLKCGGSPAPITELKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQISLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQISVMASGTFDYLVALKHLDITDNPLICNCDLLWVSDWVRITRVKLVGNPKCAFPEHKTNTTIKKLKISLDLKACSNALPMTSLIAKPSHDQVVFEGDSLVLTCNAPFASGLIKYTVKWVHPLLEICDVNVTYTDIQEEAVAETTIYFSNITNHHAGNWTCMYSDQNNVYHNYTINVYVISNSTQFCEIKHTMTNKGLYSWPQLLLNRTSSVPCRSGEGMAHRYCHGNGTWGEVDTSECAYISNVTKLLQQFALLNVSLVQYSAVNATERLAMLIQEKTYPLAEITDPDDVMFIARAIRNYMQYIAEERDLGSALLDVISAVMNISMPVLAKAETKYGACTDMMNAAEDISAYINNVHGQKSNLAIERFRVSEGFGGATCVWYSGGEVRGAEPPRLHCTATNRTVAPLFTLSDTLIHATVQIPQSLIFSTTESGALVQMKPSDLVVSVYEHAALFPLLPTLDDDATLTGHRSKDYYGRSTKREDMNIEITSPVVGFQLKGTEWSGELVEPVLAGVRARPGARTHVALWDAHTRHWTLNHTDCRISHAVSEMVIISCSRLARVGLVQNVETGIYGARTDGARFKVSHPAVYVGSLLLGGCLACAAITYATCHADILMPNKTKHALVNTWVAICLLCFMYTLGIYQTENVRLCQALGLLIHYLSLCCLLWMCVSASNMYKWVTRADGPPRTPEDELPPDAPAHKPILGLYLVGWGIALIVCGISGAVNIKDYAGYSQCFLSTAPALSALFVPGGILLMFLLVLFALIRCTIRNMNVQLSEGTQATENVDLEMWEPQVHDRAERRSVKSAPDSESEDAEHSPIVQLRAHVIVACLYVAVWACGAVAVYRPLPAYLPYQEDICSIVYAVCATVLGTFVLFFYGIARSDVRAQWALVHCYFQKSKQCCRNRSVFDANQRNVPADPSGAAAPAPLPNDNRSRSGSRSSGRTNPKTNNGGTYKAGAELNGQTLHKDVLKNTNGKTPNINLVVLHRQQYRSNNSMLTYPDASTVAPDIFYNPNQMNVAKKFFKKQRQNMKRNCLELPTRNDYDNDSHFSLPLPTKEAYSGMANIINSGSKVNNTNIHVERSNNGIKETRNVANPNLLEDEHKDYKSYTNDKKTWNKNEDPKTDRSRVMNIYTNVPETQVPQHQVIKANAPSNLNAQRSSVSEECLQSHADRPEMRTISQQCSLEYSSASEIAMPHTCSDQTLNTHSEMTSLQETHSALCSTNEITDTESFGQYIDYMQPNKGQDGKENKDKSLQDISEECTMNSDDAARSGSPQHPDAGELDNLLQDPELGSKDKLDDDKDTFFLAKTTYDFETCSTNASEQGFENDSDIYCPNYQMSEVSIRSHGLYAPSPSSMCPNEISFSTEDVSNIENQYVNYDPGWRKTIKSNPKLGKYVPTPALSCPDVNRDSSPVSFASEIDELYTQITSRERDKDRISRKDTCLDVTLNSDVTLRPDSDSCASEGEGRGETAL

Summary

Similarity
Belongs to the G-protein coupled receptor 2 family.
Pfam
PF13855   LRR_8        + More
PF00002   7tm_2
PF01825   GPS
PF13306   LRR_5
PF01463   LRRCT
PF00560   LRR_1
PF00578   AhpC-TSA
PF00096   zf-C2H2
PF07776   zf-AD
PF00047   ig
Interpro
IPR013783   Ig-like_fold        + More
IPR003599   Ig_sub       
IPR000483   Cys-rich_flank_reg_C       
IPR007110   Ig-like_dom       
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR036179   Ig-like_dom_sf       
IPR036445   GPCR_2_extracell_dom_sf       
IPR017981   GPCR_2-like       
IPR000832   GPCR_2_secretin-like       
IPR001879   GPCR_2_extracellular_dom       
IPR000203   GPS       
IPR026906   LRR_5       
IPR013766   Thioredoxin_domain       
IPR000866   AhpC/TSA       
IPR036249   Thioredoxin-like_sf       
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR013151   Immunoglobulin       
SUPFAM
SSF111418   SSF111418        + More
SSF48726   SSF48726       
SSF52833   SSF52833       
SSF57667   SSF57667       
Gene 3D
PDB
1W8A     E-value=5.88101e-18,     Score=229

Ontologies

Topology

Length:
1614
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
150.60661
Exp number, first 60 AAs:
0.00093
Total prob of N-in:
0.00162
outside
1  -  728
TMhelix
729  -  751
inside
752  -  763
TMhelix
764  -  786
outside
787  -  790
TMhelix
791  -  813
inside
814  -  845
TMhelix
846  -  868
outside
869  -  882
TMhelix
883  -  905
inside
906  -  966
TMhelix
967  -  989
outside
990  -  998
TMhelix
999  -  1021
inside
1022  -  1614
 
 

Population Genetic Test Statistics

Pi
209.804428
Theta
212.770111
Tajima's D
-0.685993
CLR
1185.314103
CSRT
0.20213989300535
Interpretation
Uncertain
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