Silkworm Genome Informatics Database

Gene

KWMTBOMO13950 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011290

Annotation

PREDICTED:_kinesin-like_protein_KIF20B_[Amyelois_transitella]

Location

Bomo_Chr23(-):14386408-14396257 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.636

CDS

ATGATGGATCAACGTTATTCGGACAACGAAACGTCTAAGAGGGACATACCGTCTTTCATTGAGCCTAGACCACCGCTCATACGAAATCCATTCATGAGACCTAAGCCACAAAAGGGTACAAATTTACTTGAACTTTTTGAAGAAGACTCTGAAATAGAAGAGCCTGAACTAGTGAAAGTGTATCTTCGGATGAAGCCATGTAATGAACCAAATTATATTTACGAAGTGCGATCAGATAAAAGTTTAGTAACATCGCTTGACACTACCACGGCAGGCCACGGAAGGCGCACTCAACATAATGTGTCTAAAATGTATACGTTTTCCCGTATATTTGGAGCGGAGTGTACACAGAAAGAAATTTTTGAAGAGGTTGTGAAAGAAAACCTTAAGAAGCTACCAGATGGTCACAATTTCACACTTCTCACTTACGGTGCGTCAGGCTCTGGAAAGACATACACATTAATGGGCACTGTTGGAGCTCCAGGCTTGGTGCCAAGATCTCTGGAGTATGTGTTCAAATTGGTTGATGCAGCTCAGCACCCTTTGTACAGACCGGCTGATGGTGGTGCAGAGAAACTCAGTTATGCTGAGCAGGAGTATGAACTGCAGTGGGTCAAAAGATTGCGTCACGTTTCGGCTCCTCTTCGTGACAAGTACCGTCGTATGAGTAGTCAGCTTCAAAGAGACTTAACCACCAGTACAATTGATTTATCTAATAAAACAAAATATTACGTTTGGGTATCATTCGTTGAAATATACAATGAAGCCATATATGACTTGCTGTCGCCTCCAGAGAAGAGAACTAAACTTCGCATAAGAGAAGATTCTTCCGGGAATGTATACGTAAAGGGTGCAACTCAAGCATTTGTCCGTTCCGGTGAGGAAGCTTACGATATAATGGTGGCTGGTAAACACAACCTTGTAGTCGCGGCCACTGGAGTACATGCACACTCTTCAAGGTCACACTGCATCTTCACCATCACTATGGTAACGGAAACTGAGGGCACGGGTCGCTGGGCCAGCGTGCGGCTGTGCGACCTGGCGGGCAGCGAGCGCGCGCGCGCCACCCGCAACACGGGCGCCCGCATGCAGGAGTCGCGCGCCATCAACGCGTCGCTGCACGTGCTCGAGCGCTGTCTGCACACGCTGCGACGCAAGCAGCGCTGCGCCCGCGACGCGCTCGTGCCCTACAGGGAATCAAAGCTGACCCGGCTGCTGGGGTCTGGACTGTCCGGGTGTCGCGGCGAGGCGGTAAGCATGGTGGTGACCCTCAACCCGGCCCCGGAGTACGCTCACGAGACCAAGCACGTCCTGTCGCTGGCCGCCGTCGCACAGGACATACAGGTCAACAACACTGTGCTGACCACCACCTTCGAGACCAGCGCACAGGACAGCACCCTGGACAGCGGAGCCGAACTGATGAGGCTGCGGACCGAGAATGAGAGACTGCACTTCGAACTAATACAAGCACACGCCCGCAACAGAGAGCTGATGGCCTCGATGGAGGCACACCAACAGGAGACTGCGCAGACCATGAAGGAGCTGGTGGACGAGGCCAAGGACTTGACCAAGCAGTTCTACGAGGAGCAGCTGCGGGCGCTGCGGGCGCAGATGGACGAGATGGCGGAGGAATATGAGAACAATCTCGAGAAGGTCGCAGCGCCACCTAACGTATCTCCACTCCTACAAAATAAGATAACCGAGCTGATGACAGAAATTGCTGTTTTGGAGGAAAAATTACTTGAAGAGCAGCTGGCACGAGCTCGGGCACAGAACGAAGTGGAACATCTCCGCAGCTGTATAGACGAGAGAGACGAAAAAGCATTCAAAGACAATGCCTCAGCGGACAACGAAGATGTTATGTCTGTCGCTGACAGCGAACCTGACAGCGAAGAGGAGGTCGACCCTCTCGACCAGAGCCTCGAGCCGACCTTCAGAAAGGATAACTTGAGTAAATCGCAGCTCGGTCCAAGAGAACCTGCTCGCATTGCACTCCCAGGCCCGGACCACACCTTGGACACATCTGAGGATCAGACTTGTGATGACTCCATTCAACACTCATTGCTGCCTATTACAGAGGTAGAGTTCACTGAACATAACACTGTGAAAACGAATCCAGAAGAATGTACAGAAGACACTGCATTGGATGTCACCGAGCGCACAGAAGGGTCAGTGTTAAGTTCTGCCAGTGTTGTTGACGGCGCAGGAGATGTGAGCGCTGCAGATTTATCAACGGAAAATCCTATTGATGTTAGTTTTAATGCGGAAAACACTAACAAGATTAATGAATTCAGAGGCTCGTACCGCGACGGACGCGAGGATCGAACTATCGAAAATAAAATCAATACAGACGACAGTATGGACGTTACGAATGAAGAGAAAGAAGATGTTATAGAAACAGAGCAGCGGAAAGATGTTTTAGAGTTCAAAGTTCCCAAAGAGACTTTGGTCAATCAGACCATAAGGTCGCTCAAATCTAAAGGCAGCGATAGCTCCCTGGCGCAGTTCGAGCGGATAGAAATGGCGACCAAAACTGAGGAACCCCTCGCCGCCCCCCTCGCTTCCCCCCGCGCCGACCTCGGCTTCAATATCCTCAAGGAGAAACGGAACTACTTTGATGATGTTAAATCTGAACAAAATACAATAGAACAAGATAAAGGTAATAAGGTTCCGTTTAACGATAACGCACCGAGCATGTTACTAAACAAACAAACTGTAGTCGAATTGAAAAAGTCGTATTTTGAAGATAACGCTCTGGACGCGGCCACATTAGATGTTGTTAATACAGGCAAAGAAAAAAGAACATATTTTGACAACATATCTGTCAAAGTTGACAACAATTTAGCACATAAGAAGATCAGTGAGCTGCTTAAACTAGAAGAAAGGTCCCCGTCTATAGTGAAAGAAGAGTTTATAGAGGATTTTAATAGACCAAGTACCATGAAGAAGTTGATGTGTAAAAATCTATCCAAACCGATTGATGCGGTCATGTCGACCCACAAAAAGAAACACGACTCCGTTGATATATTTGAAGGGTTTGATTCGCCAGCAGCCCCCGCCGCGTCCCCCGCGGGGATCCGTGCTGCAAGGGTCTCGCCGGGACTGACCTCATCAACCGAACACGAAATAAACATTAAACTAGAACCGCAACTGTCGAAGGACGAGCCTGGCGACAGTAGCGTACACGACAAACCCGCGGCTGACGTCATCATCACACTCACCAGAGATACAGACGCCGTCCCAGCGGACAACACTATCGACGAGTTCGAGAACCTGTACAAAGATGTGTCGACGTCTCGAGCTGCGGAGTTTGAGACGCTGGTCTCACACAACGCGAGCAGGGAGACCGGGGACCACAACACTAGCGGCGCCGCCGCGGACGACGCGGAGACAGACCTCAAATCGAATCTATCAGAATTCGAACGAGTAAAATATAATCTGCGGAGTAAACCAATAGATACAAAAAAAGAGAAAAGTGTCAAAATAATAGATGAAAGCGAAGAGAAGTCTGAAATCAAAACTAGGCCGAGACGAGCGAGGCGGCGCGCGCCCGACGCCGCCCCCCCGACCCTCGCCGACATCGGGAACCTGCACGAGTACCCCGACGTGACGCCAGCCGGGACCGGCGGGGGGGCGGGGGGACCACACGTCCCGTCCCCAGAGAAGGAATCGGAAGAAAATCTGCCCCCCATGCTCGGGGTTCAAAGCTGCCCTTCGAAAAGCATAACTCGAAGTCGTCGGAAGCTGTTCACTCCGCGCGCTGAGCCGCTGGACGAGTCGGCGGGCGCGCCCGGGGACAGCAGCGAGCGCCCGCACGTCCCGCGCCCCTCCTACCACCGCCCGCGTGCGCGCCGCAAGCTGTGA

Protein

MMDQRYSDNETSKRDIPSFIEPRPPLIRNPFMRPKPQKGTNLLELFEEDSEIEEPELVKVYLRMKPCNEPNYIYEVRSDKSLVTSLDTTTAGHGRRTQHNVSKMYTFSRIFGAECTQKEIFEEVVKENLKKLPDGHNFTLLTYGASGSGKTYTLMGTVGAPGLVPRSLEYVFKLVDAAQHPLYRPADGGAEKLSYAEQEYELQWVKRLRHVSAPLRDKYRRMSSQLQRDLTTSTIDLSNKTKYYVWVSFVEIYNEAIYDLLSPPEKRTKLRIREDSSGNVYVKGATQAFVRSGEEAYDIMVAGKHNLVVAATGVHAHSSRSHCIFTITMVTETEGTGRWASVRLCDLAGSERARATRNTGARMQESRAINASLHVLERCLHTLRRKQRCARDALVPYRESKLTRLLGSGLSGCRGEAVSMVVTLNPAPEYAHETKHVLSLAAVAQDIQVNNTVLTTTFETSAQDSTLDSGAELMRLRTENERLHFELIQAHARNRELMASMEAHQQETAQTMKELVDEAKDLTKQFYEEQLRALRAQMDEMAEEYENNLEKVAAPPNVSPLLQNKITELMTEIAVLEEKLLEEQLARARAQNEVEHLRSCIDERDEKAFKDNASADNEDVMSVADSEPDSEEEVDPLDQSLEPTFRKDNLSKSQLGPREPARIALPGPDHTLDTSEDQTCDDSIQHSLLPITEVEFTEHNTVKTNPEECTEDTALDVTERTEGSVLSSASVVDGAGDVSAADLSTENPIDVSFNAENTNKINEFRGSYRDGREDRTIENKINTDDSMDVTNEEKEDVIETEQRKDVLEFKVPKETLVNQTIRSLKSKGSDSSLAQFERIEMATKTEEPLAAPLASPRADLGFNILKEKRNYFDDVKSEQNTIEQDKGNKVPFNDNAPSMLLNKQTVVELKKSYFEDNALDAATLDVVNTGKEKRTYFDNISVKVDNNLAHKKISELLKLEERSPSIVKEEFIEDFNRPSTMKKLMCKNLSKPIDAVMSTHKKKHDSVDIFEGFDSPAAPAASPAGIRAARVSPGLTSSTEHEINIKLEPQLSKDEPGDSSVHDKPAADVIITLTRDTDAVPADNTIDEFENLYKDVSTSRAAEFETLVSHNASRETGDHNTSGAAADDAETDLKSNLSEFERVKYNLRSKPIDTKKEKSVKIIDESEEKSEIKTRPRRARRRAPDAAPPTLADIGNLHEYPDVTPAGTGGGAGGPHVPSPEKESEENLPPMLGVQSCPSKSITRSRRKLFTPRAEPLDESAGAPGDSSERPHVPRPSYHRPRARRKL

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.

Uniprot

L7X3Z5 A0A194QJP9 C3PPF6

Pubmed

23674305 26354079

EMBL

KC469894 AGC92730.1 KQ458761 KPJ05140.1 CU467808 CAY54166.1 + More

Proteomes

UP000053268

Pfam

PF00225 Kinesin

Interpro

IPR027417   P-loop_NTPase        + More
IPR036961   Kinesin_motor_dom_sf
IPR027640   Kinesin-like_fam
IPR001752   Kinesin_motor_dom

SUPFAM

SSF52540 SSF52540

Gene 3D

3.40.850.10

ProteinModelPortal

L7X3Z5 A0A194QJP9 C3PPF6

PDB

5ND7 E-value=6.10211e-46, Score=469

KEGG

101745733 K10402 kinesin family member 20 | (RefSeq) kinesin-like protein KIF20B

GO

GO:0007018 GO:0008017 GO:0003777 GO:0005524 GO:0004814 GO:0006420 GO:0016787 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR24115

Length:

1287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0858499999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00394

outside

1 - 1287

Pi

259.470795

Theta

200.025121

Tajima's D

1.068462

CLR

0.37373

CSRT

0.67951602419879

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics