Silkworm Genome Informatics Database

Gene

KWMTBOMO13949

Pre Gene Modal

BGIBMGA011291

Annotation

PREDICTED:_cAMP_and_cAMP-inhibited_cGMP_3'?5'-cyclic_phosphodiesterase_10A-like_[Bombyx_mori]

Location

Bomo_Chr23(-):14383661-14384157 View in EpiBrowser

Full name

Phosphodiesterase

Location in the cell

Nuclear Reliability : 2.468

CDS

ATGATGCACGAACTCACTCCTAAGAATGTGAAATCGACAAAAAGCAAACAGGACGTGAAGCAGCAAGACGCCGAAGACGCTTTGTCCAAGAAGAGCTTGACCAAAGTACAATCTCACTTCTTGGTCCCGTCCGAGAAACTGGATAAGGTGACCAGACGAGTGATCGCTCCGTACGCGCAAATAGAACGGAAAGGCTTGAAAGAATCCGAACAGAAGGCCAGGAAATATCTCGATATTAACCGATTCAACGTGTTCCTGGATGACGAGATCGATTTGGACGCGTTATTGTACGAAACTGCCATGGTTTTGAAAAACTTTACCAATAGTTCCGGTAATTTAACTCGTTTGATGCTCCGTAGAGTCAATAAAGAAAACACCCTTTAA

Protein

MMHELTPKNVKSTKSKQDVKQQDAEDALSKKSLTKVQSHFLVPSEKLDKVTRRVIAPYAQIERKGLKESEQKARKYLDINRFNVFLDDEIDLDALLYETAMVLKNFTNSSGNLTRLMLRRVNKENTL

Cofactor

a divalent metal cation

Similarity

Belongs to the cyclic nucleotide phosphodiesterase family.

Uniprot

H9JP37 A0A212F6Z3 A0A2A4K8V9 A0A194RF41 A0A194QJR4 L7WWC2 + More
L7X1I8 C3PPF3 A0A2H1W6A6 N6UAW4

EC Number

3.1.4.-

Pubmed

19121390 22118469 26354079 23674305 23537049

EMBL

BABH01009575 AGBW02009949 OWR49512.1 NWSH01000057 PCG80102.1 KQ460297 + More
KPJ16202.1 KQ458761 KPJ05155.1 KC469894 AGC92727.1 AGC92726.1 CU467808 CAY54163.1 ODYU01006306 SOQ48034.1 APGK01031390 KB740809 KB632376 ENN78870.1 ERL94052.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000053240 UP000053268 UP000019118 + More
UP000030742

PRIDE

H9JP37

Pfam

PF01590 GAF + More
PF00233 PDEase_I

Interpro

IPR023174   PDEase_CS        + More
IPR003018   GAF
IPR023088   PDEase
IPR002073   PDEase_catalytic_dom
IPR029016   GAF-like_dom_sf
IPR003607   HD/PDEase_dom
IPR036971   PDEase_catalytic_dom_sf

Gene 3D

1.10.1300.10 3.30.450.40

CDD

cd00077 HDc

ProteinModelPortal

H9JP37 A0A212F6Z3 A0A2A4K8V9 A0A194RF41 A0A194QJR4 L7WWC2 + More
L7X1I8 C3PPF3 A0A2H1W6A6 N6UAW4

KEGG

101742652 K18438 cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10 [EC:3.1.4.17 3.1.4.35] | (RefS

PATHWAY

00230 Purine metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0046872 GO:0007165 GO:0004114

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00927

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20784

outside

1 - 127

Pi

21.900974

Theta

14.998334

Tajima's D

1.239944

CLR

0

CSRT

0.729763511824409

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics