SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13944
Pre Gene Modal
BGIBMGA011292
Annotation
PREDICTED:_uncharacterized_protein_LOC101745580_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.706
 

Sequence

CDS
ATGTTGATTATCAGTGCCTTAATAACTGGGATGGTGACCGGTCTTCAGAACATTACGACCGAGTCTCCATCGATGATCAGTGACATCACAACATCATTGAATACGAAGGATAAAGTTCCAGAAATGGGGCTGGTTGAACCCACTAAGCTATCTCTACCCACTAGTGACATGGTGAATGTCAGTATTCACGACCAGCCGTCTATGTGGGATTTGTACTTGCACCACTGTTCCAAGTGGAGGCCAATAAATCACATATTTTTCCAAGTGGCGAATATATTCTTTCTTATGTCATTCCTGGCACCTCATACAGACATTGGGCAAATATGGCTTCGGGTGGGCCTGATGATGGGGTGCGCGTTTTCAGGAATGTGGGCATGGAGTGTTGAATGTTACTTGGATGCAGTGCTATGGAACAGTGTATTTATATTGATAAACTTTGTGTATTTCTCTTACCAGTTTTATTTAATGAGACCAATTAAGTTCCACAAGGAGATTGAAGAGGTGTACTTAGCGTTGTTCAAACCACTACGGGTATCAAGGAGACAGTTCCGCCGAGTGCTCATGTGCATGAGAAATGTGAGGCACCTCAAGTGTCACGAACTCTATGCACATGAGAAGGTTACTAAAGTTGACAGCCTTTCGTTGGTGCTTTCGGGCAAGCTTGTGGTGTCACAGAATCAGCGAGCTCTCCATATAGTGTTTCCTCATCATTTCTTGGACTCTCCCGAGTGGTTCGGCGTTTCGACTGACGATTATTTTCAGGTGTCTATAATGGCGATGGAAGAGTCTAGGGTGCTGGTCTGGCATAGAGATAAGCTGAAACTATCAATAATGTCGGACGCTTTCCTGCAAGCGGTCTTCGATCATATCCTCGGACGGGACGTGGTCCACAAATTGATGCAGGTAAGCGAAACGATGGCAGTCAGCAACGGTCACCTCCCTAACAGCTATGAAGAGGGAGAGGACAAGCCGATGCTGGTCGTGAAGAAAGCTGGCGATGGACCTGGAATCACCGCGATACTCAACAGGCAGCTTCAAGGCGAGCATGCGCCGTTACTGCGAGCCACGCCGACGACTCATGAATGCTGA
Protein
MLIISALITGMVTGLQNITTESPSMISDITTSLNTKDKVPEMGLVEPTKLSLPTSDMVNVSIHDQPSMWDLYLHHCSKWRPINHIFFQVANIFFLMSFLAPHTDIGQIWLRVGLMMGCAFSGMWAWSVECYLDAVLWNSVFILINFVYFSYQFYLMRPIKFHKEIEEVYLALFKPLRVSRRQFRRVLMCMRNVRHLKCHELYAHEKVTKVDSLSLVLSGKLVVSQNQRALHIVFPHHFLDSPEWFGVSTDDYFQVSIMAMEESRVLVWHRDKLKLSIMSDAFLQAVFDHILGRDVVHKLMQVSETMAVSNGHLPNSYEEGEDKPMLVVKKAGDGPGITAILNRQLQGEHAPLLRATPTTHEC

Summary

EMBL
NWSH01000057    PCG80100.1    KC469894    AGC92724.1    RSAL01000075    RVE48889.1    + More
KQ458761    KPJ05157.1    AGBW02009949    OWR49510.1    GEBQ01016295    JAT23682.1    GFDF01011030    JAV03054.1    GFDF01011029    JAV03055.1    GBHO01042135    GBHO01042133    GBRD01000026    GBRD01000025    GDHC01017116    JAG01469.1    JAG01471.1    JAG65795.1    JAQ01513.1    GBHO01042136    JAG01468.1    GBHO01042137    GBHO01024844    GBRD01000024    GBRD01000023    GDHC01009249    JAG01467.1    JAG18760.1    JAG65797.1    JAQ09380.1    GDKW01003546    JAI53049.1    GFTR01005098    JAW11328.1    GAMC01014098    GAMC01014095    JAB92460.1    GBXI01005811    JAD08481.1    GAKP01007870    JAC51082.1    KK107231    QOIP01000009    EZA55081.1    RLU18923.1    AJWK01016334    AJWK01016335    AJWK01016336    KQ414716    KOC62883.1    KZ288499    PBC25165.1    GAPW01000974    JAC12624.1    GFDL01002722    JAV32323.1    GFDL01002717    JAV32328.1    GFDL01002726    JAV32319.1    GFDL01002729    JAV32316.1    GFDL01002708    JAV32337.1    GL887802    EGI70014.1    KQ981805    KYN35650.1    KQ981042    KYN10082.1    KQ976716    KYM76816.1    ADTU01002219    ADTU01002220    GL444953    EFN60407.1    GFDL01002720    JAV32325.1    KQ434823    KZC07227.1    GFDL01002711    JAV32334.1    GFDL01002699    JAV32346.1    GFDL01002707    JAV32338.1    GAMC01014096    JAB92459.1    GFDL01002721    JAV32324.1    KQ978344    KYM94831.1    GL446696    EFN87376.1    KQ435812    KOX72786.1    KQ982431    KYQ56481.1    GAKP01007872    JAC51080.1    CH933815    KRG07554.1    JRES01001179    KNC24753.1    NNAY01000442    OXU28352.1    AAAB01008846    EAA06464.5    CH916370    EDW00490.1    CH379065    EDY73184.1    AXCN02001395    CH940651    EDW65641.1    KRF82325.1    KRF82326.1    EDW08027.1    KRG07557.1    APCN01001015    APCN01001016    GDRN01026227    JAI67691.1    CP012528    ALC48547.1    CH964239    EDW82074.2    KRT07205.1    KRF82323.1    OUUW01000003    SPP78057.1    KRT07204.1    KRG07556.1    KRF82324.1    KRG07555.1    CH480823    EDW56343.1    AE014298    AF247183    AY113513    AAF50859.2    AAG18016.1    AAM29518.1    AAS65416.1    CH902640    EDV38392.2    KPU77391.1    CM000162    EDX03062.1    AGB95591.1    CH954180    EDV47585.2    BT132753    AET07636.1    AGB95590.1    KRK07084.1    CVRI01000020    CRK90682.1    CRK90684.1    CRK90681.1    GGFM01008327    MBW29078.1    PBC25164.1    GGFK01010471    MBW43792.1    ATLV01013410    ATLV01013411    KE524855    KFB37899.1    CRK90683.1    GGFJ01007083    MBW56224.1    GGFJ01007084    MBW56225.1    GGFL01000237    MBW64415.1   
Pfam
PF04831   Popeye
Interpro
IPR018490   cNMP-bd-like        + More
IPR006916   Popeye_prot       
IPR014710   RmlC-like_jellyroll       
SUPFAM
SSF51206   SSF51206       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 14,         Likelihood:  0.503325
 
 
Length:
362
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
60.3561300000001
Exp number, first 60 AAs:
0.46625
Total prob of N-in:
0.80010
inside
1  -  81
TMhelix
82  -  100
outside
101  -  104
TMhelix
105  -  127
inside
128  -  133
TMhelix
134  -  156
outside
157  -  362
 
 

Population Genetic Test Statistics

Pi
253.154686
Theta
168.63806
Tajima's D
0.302257
CLR
0.729247
CSRT
0.453777311134443
Interpretation
Uncertain
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