SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13929
Pre Gene Modal
BGIBMGA011311
Annotation
PREDICTED:_uncharacterized_protein_LOC106137006_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.215
 

Sequence

CDS
ATGTCACGATTCAATAACATTAAGCTAAATAGTCCAGAACCTTCTTTCATGACATACAATAAATATAAACATAGATTAACGACAACCATCAATTCTCCTATCTTACAAAAGTCTCCATTGTGTAGTACTCCTTTCAAAGAAAAATATCGCAGTCAATCAATTTATAAATTTTCTCCGATACAAACTAATAAGATCAATTGCAACAGTCCAACTTCTGATTCTGTAATTGAAGAAAAAAATGACAGTCATACCAGTATTGTGTTTCGTCCAATTGAATTAAGAACTAATGATAGAAAGTCTCTCATGGTAAATAAATCTGAGAATATAAATGATGTAACTAAAATAGGATCTGAAGAACAACATAGTTCATCAACTAATGAAATGATTGAACATGAGAAATCAATTAGTTGTGTAAGTAATGAAAATAATATGCCAAATGTAGAATTGTGTTTGCTGCATAATACAGAAGTCGAACCATTCTTGGGTTTTCCTATTGGTGTTGAATCTACAATAATAGAGAAATGTATTAATTTGGAAACTCAATCAACCACTGTAGTTTTGAATAATATTGGCACAGGTGATTGTAAAGTTGAAGATCAAAAAGATCACAACAGTTATTCAGAGAACCTAGAAAAACACGAAAAAAAAGATGATAGTATCTCAATAGATCTTAATGACACTGATGATTGTAAAGTTGAAGATCAAAAATATCACGACATATATTCAGAGAAGCTTGAAAAAAACGATGATAGTATCTCAATAGATCTTAATGACACTGATGATTGTAAAGTTGAAGATCAAAAATATCACGACATATATTCAGAAAAGCACGAAAAAAACGATGATAGTATCTCAATAGATCTTATTGACACTGATGATTGTAAAATTGAAGATCAAAAATATTACGATATATATTCAGATAAGCACGAAAAAAACGATGATAGTATCTCAATAGATTCTTCAGACAAAGATTCATCATATGACACCTGTAATAGTGAACACTATTCCCAACTTGTTGATGTAAAAGTAAGTGATGTACAACCAAGAGTAATGATTGAGAAACTGAATGATTCAGTATTCATCAGGTACTATGAGAAAATGCTCAAAAATGATGCATGTGATTCTGAAAATGAAAACGACAAATCCAGTTACAACACAATAGAGTCGAGTCTAGAAGATATGTCTAAATCATCAAAGTCTGATTCATCTTTTGATGAATATAGTCAAAATTCAGATGATGCTGTTTCCAATAATAGTAGTTTTTATGGTGAAAATAATGGTGCATATAAGGAAGAACACAGCAACAATGACGATAAAATAAGTTTTGTTACAACAAGAAAACGAAATGATGTTACAAATGAAAAAATGATTTCAATGTTTGATAATTCTAAAGTTACTGATTGTAGTGATGAACTAGATTTAACTGTGCTGAGTAATAGAGTTTATTTAAATTTTACTTCTGGTGAATGTGTGAGTACCAGCATAGTAGAAGCTACTATTATAGAATCTGATATGGAGGAGAATATTTCTGGTAAACAAAATTTGTATACCAATGATAATAGTTTAGAAAACGAAGTATGTACAGATATTGTCAATAGTAATACTGAAAGTACAAATGAAGTGACACTGTATTCTATTCCAACGAAAATAAATGATTTTGAAATAAACACTAGTAATAATGAACGAAAGTCGTCTATAACAATTAGACGAAAAACTAGACTATCAAAGAAGACTAAGTCGTTAACTCCCCAAAAAGATGATGAACAAGTAAAATCAGAAATTACTATGAAATATGATATCATCGAAGTGACTTCTAGTGACAATGCATGTGAAGAACATGGCACTGATGATTCTAATTTCGACAAAAAAGCAGTACAATCAAAACCAAAAAAAGTTTCAAAGATATCTAAAAGACAGAGTAATAGTAATATTTCTAGAGTAGTTAACAGTGAATCTTCGGATGATTCGGAAGATTTTGTTGAAGAACAAAGACTGATTAGTATTAAAAAAAAAGTAACAAATAGATGTACAAGACTGTCAAGAAGAAGTACTATAATTAGTCAACCAGAGAAACCAATTAAAAGTTACATCAAGGTTGAGCATACCAGTTTTTCACTAGATAATAATGCTTTACCAGATAATAATGAAAGCAATAAGCATACTAAAAGAGGAAATATACAAATTGATGATGAGAATTCCACATTGGCGACAAGAAGCCTTGGGATAACCAGAAAAAGCCGAGATAATATTCAGAGTTCTGATTTTAGTTCAGAAGTAAAACCATGTATAGTACTACAGCCTGGAAAGAAATGGGAACGATCATTAAGTATTTACAGAAGAATGACAACAATGGATAATTTAGAAAAGTCTATTTTGGATGAATCAATGGATATGAAAGGCAGGAAGTATAGGCAAAGTGTTATCAGTACAATGGAATTGCAAGAAAGCAGAGGGCCACTACACAATGAATCCATCAACAGTCGCAGAAGTACATTTGTATCTAAACCAAGCAGATCGACTATAAGTATTCTGAAGGATCCTAATAGCACGAGAACAAGTTTATGTCCATCTACTGCCTGTGATGATCTTAAAGGATTTTTGAGCGACGATTGTGATGATACGATTGTCGGGTTATCAAAACTCTCGCTCGATGATGTGGAACCGGAGATCACCGTTCTAGGTATACATGATACTTCGAATCGTGTTGCTACAGCTCGAGATTACGTGTTACGTCGATGCAATCAAACGGATGCTATACTATTTGATGAATGCTATCCAGACGCACTTTTGAAAAACTGTCACAAGATTGGCGAAGGTGTGTACGGGGAAGTATTTCTTTGGCGTGCTCGAGATGGCAGAGCTCGAGTAATGAAAATAGTTCCAATTGCTGGTCATACCAAGGTCAATGGAGAAGACCAAAAGGACTATCACGAGATTATCTCGGAAATTGTGATTGCTATGGAATTGAGCGCCCTGCGCGCTCCCATAGCCGATATCGAACGACATTTTGACGAAGGGAATGATACTGACGCTTTGGATCTACATGCTATAGGCAATGCAACGGATGTTTTTAATCAGGTTCTAGCAGTAAGGTGTGTGTACGGCAGCTACCCATCACGTTTGCTAGATCTCTGGGACTTGTACGACGAATGTAAAGGTTCCGAGAACGACAATCCGGCCATCTTGCCCGTCGATCAACAATACATCGTACTAGAGCTGGCCAACGCCGGACAAGATTTGGAGAGCTACCAGTTCAACAACGCTGAACAAGCACACGCGCTGTTCCTCCAGGTGGCATTCGGTCTGGCCGTGGGCGAGGAGGCCTACCAGTTCGAGCATCGCGATCTGCACTGGGGAAACGTTCTCATCGCGCCCACCGAACAAAAGTTTGCCACGTTCGTGCTCCGCGGGCGGCGGCACTGCACGCCCCGCTGCGGCGTCGCGGCCACCATCATCGACTACTCGCTGTCGCGCGTGTCGCTGCCGGCGAGCGCGCCCGCACGCTGCGCCGCGCTCTACAACGACCTGGCGGACGACGACGGACTCTTCGACGCCGTCGGAGACTATCAGTTTGAGGTCTACCGCCTCATGAAAAGCAAGTTGGGCAATGATTGGAAGAACTTTGAACCATATACAAACATACTGTGGCTACATTACACTGTTGATAAAATGATAACGGCCCTACGCTACAAAAGAACCAATACAAAGATACACAAGCATTACATAGACAAATTGAAGGGCATCAAGAATAGAATTCTCGATTACAAGAGTGCAACCGATTTTGTTTTAACGGACAACGAATATTAA
Protein
MSRFNNIKLNSPEPSFMTYNKYKHRLTTTINSPILQKSPLCSTPFKEKYRSQSIYKFSPIQTNKINCNSPTSDSVIEEKNDSHTSIVFRPIELRTNDRKSLMVNKSENINDVTKIGSEEQHSSSTNEMIEHEKSISCVSNENNMPNVELCLLHNTEVEPFLGFPIGVESTIIEKCINLETQSTTVVLNNIGTGDCKVEDQKDHNSYSENLEKHEKKDDSISIDLNDTDDCKVEDQKYHDIYSEKLEKNDDSISIDLNDTDDCKVEDQKYHDIYSEKHEKNDDSISIDLIDTDDCKIEDQKYYDIYSDKHEKNDDSISIDSSDKDSSYDTCNSEHYSQLVDVKVSDVQPRVMIEKLNDSVFIRYYEKMLKNDACDSENENDKSSYNTIESSLEDMSKSSKSDSSFDEYSQNSDDAVSNNSSFYGENNGAYKEEHSNNDDKISFVTTRKRNDVTNEKMISMFDNSKVTDCSDELDLTVLSNRVYLNFTSGECVSTSIVEATIIESDMEENISGKQNLYTNDNSLENEVCTDIVNSNTESTNEVTLYSIPTKINDFEINTSNNERKSSITIRRKTRLSKKTKSLTPQKDDEQVKSEITMKYDIIEVTSSDNACEEHGTDDSNFDKKAVQSKPKKVSKISKRQSNSNISRVVNSESSDDSEDFVEEQRLISIKKKVTNRCTRLSRRSTIISQPEKPIKSYIKVEHTSFSLDNNALPDNNESNKHTKRGNIQIDDENSTLATRSLGITRKSRDNIQSSDFSSEVKPCIVLQPGKKWERSLSIYRRMTTMDNLEKSILDESMDMKGRKYRQSVISTMELQESRGPLHNESINSRRSTFVSKPSRSTISILKDPNSTRTSLCPSTACDDLKGFLSDDCDDTIVGLSKLSLDDVEPEITVLGIHDTSNRVATARDYVLRRCNQTDAILFDECYPDALLKNCHKIGEGVYGEVFLWRARDGRARVMKIVPIAGHTKVNGEDQKDYHEIISEIVIAMELSALRAPIADIERHFDEGNDTDALDLHAIGNATDVFNQVLAVRCVYGSYPSRLLDLWDLYDECKGSENDNPAILPVDQQYIVLELANAGQDLESYQFNNAEQAHALFLQVAFGLAVGEEAYQFEHRDLHWGNVLIAPTEQKFATFVLRGRRHCTPRCGVAATIIDYSLSRVSLPASAPARCAALYNDLADDDGLFDAVGDYQFEVYRLMKSKLGNDWKNFEPYTNILWLHYTVDKMITALRYKRTNTKIHKHYIDKLKGIKNRILDYKSATDFVLTDNEY

Summary

Uniprot
ProteinModelPortal
PDB
2WB8     E-value=7.54524e-63,     Score=615

Ontologies

Topology

Length:
1268
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00483
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  1268
 
 

Population Genetic Test Statistics

Pi
283.069201
Theta
195.400234
Tajima's D
1.331967
CLR
0.059635
CSRT
0.751862406879656
Interpretation
Uncertain
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