Gene

KWMTBOMO13923  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011308

Annotation

acyl-coenzyme_A_dehydrogenase_[Bombyx_mori]

Location

Bomo_Chr23(+):13696778-13713230      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.761 Mitochondrial   Reliability : 1.255

CDS

ATGGGCATCGAAACTCCGGTAGAATACAGCGGTTCCGGCTGCAATTTCCTGACAATGATGTTGGTGGTGGAAGAACTGTCTCGAGTGGACCCAGCCGTGGCCGCCTACGTCGACATTCACAACACCTTAGTCAACTCTCTGTTCATGAAGCTAGGTACAGAAGAACAAAAAAAGAAATATTTAACGAAACTCTGCACGGAATATGCTGGCAGTTTCTGTCTCACAGAGCCCAGCTCAGGATCAGATGCTTTTGCCTTGAAAACTGTTGCCAAAAAAGAAGGAGAACATTACATCATTAGCGGCTCTAAAATGTGGATCTCGAACTCTGATGTCGCTGGAGTCTTTCTAGTGATGACCAATGCTGATCCTTCCAAGGGTTACAAGGGCATCACCTGCTTTATCGTTGAACGTGAAACCCCGGGCCTCAGTGTTGCCAAGCCTGAAAACAAATTAGGCATCAGAGCTTCGGGCACATGCATGGTACATTTCGACAATGTGAAGGTGCACGAATCGAGTATCCTTGGAGAATATGGCAAAGGGTACAAGTACGCGGCTGGTTTCTTGAACGAAGGTCGGATTGGTATCGCGGCTCAGATGATCGGTCTGTGTCAGGGCTGTATGGACGCAACGATTCCTTACACACTAGAAAGGAAACAATTCGGAAAGAAGATTTACGAGTTTCAGGGCATCAGCTACCAAATCGCACACCTGCAGACACAGTTGGAAGCCGCCCGTCTTCTAACATACAACGCCGCTAGACTGAAAGAACACGGCCACGAGTTTGTTAAAGAAGCCGCGATGGCTAAATATTTTGCTTCAGAAATCGCACAAACGTTAACTTCAAAATGCATAGACTTTATGGGAGGCGTTGGTTTCACGAGAGATTTTCCGCAAGAAAAATTCTATAGGGACGCTAAAATTGGTACAATTTACGAGGGTACCAGCAACATGCAGTTACAAACGATTGCCAAATTATTAGAAAGGGAATACACACAATAA

Protein

MGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGITCFIVERETPGLSVAKPENKLGIRASGTCMVHFDNVKVHESSILGEYGKGYKYAAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ

Cofactor

FAD

Similarity

Belongs to the acyl-CoA dehydrogenase family.

Uniprot

Q19P04   H9JP54   A0A3S2TKV3   A0A068FKB7   A0A2H1WIL0   A0A2A4JN39   + More
A0A0N1PFX2   I4DJW7   A0A194QDY8   S4PDU4   A0A034VXN0   A0A232FGL5   A0A182G6W1   K7J9F0   A0A0K8VCB6   A0A1B6H1P6   Q171S4   A0A0A1WUM1   T1D2H1   A0A1Q3EZA1   A0A1B6JQ28   A0A1Q3EZA4   A0A1L8DZL3   T1DGK4   B4N4V3   U5EQP8   A0A3B0JLC2   Q2M0E5   B4GRR0   W8C7I0   A0A1A9Z3D4   B4KZ04   A0A1I8QF43   B4LD52   A0A224XRK2   A0A1A9WFH3   A0A182IQS2   B0WQ26   A0A0P4VIT3   A0A069DT04   A0A1A9VYL2   A0A1A9XWJ0   A0A1B0AYA1   B4PH24   A0A0M4EDV0   A0A0V0G445   A0A084WG81   Q9VVU1   Q95U46   A0A1B6C654   D3TRT6   B4IYD8   W5JFB0   A0A182TMV4   A0A182KTZ0   A0A182XG95   A0A182HRU4   Q7Q1H8   B3M858   A0A1W4UP90   B3NDU9   A0A151X142   A0A1L8EFA1   A0A182UUR6   A0A151J1L4   A0A151I0M2   A0A182F2X3   A0A1B6CCZ7   A0A2M3Z2P1   A0A2M3ZGJ3   A0A1W4X7P8   A0A2M4BNT2   A0A182Q7G7   N6U8L7   A0A182P4C1   T1PBC4   A0A182JQ47   A0A2M4BP67   A0A088AFJ0   F4WDI2   A0A182YDE2   J3JUH9   A0A0J9RY01   A0A2M4A2S4   A0A2M4A328   A0A182MSQ2   A0A158NIP9   A0A154P2B0   A0A182NBU2   A0A2A3E2N0   A0A182SGH3   A0A336KJB0   A0A182REX5   A0A182WGL9   E2BRN5   A0A0A9Y8G7   A0A310S473   A0A0T6AYJ6   A0A195CBT9   A0A026VUH3  

Pubmed

19121390    26385554    26354079    22651552    23622113    25348373    + More
28648823    26483478    20075255    17510324    25830018    24330624    17994087    15632085    24495485    27129103    26334808    17550304    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    20920257    23761445    20966253    12364791    23537049    25315136    21719571    25244985    22516182    22936249    21347285    20798317    25401762    26823975    24508170   

EMBL

DQ515927    ABF71566.1    BABH01009531    BABH01009532    BABH01009533    RSAL01000075    + More
RVE48878.1    KJ622079    AID66669.1    ODYU01008888    SOQ52867.1    NWSH01001034    PCG73004.1    KQ460973    KPJ10113.1    AK401585    BAM18207.1    KQ459144    KPJ03758.1    GAIX01004807    JAA87753.1    GAKP01012327    JAC46625.1    NNAY01000224    OXU29884.1    JXUM01045772    KQ561450    KXJ78547.1    GDHF01015720    JAI36594.1    GECZ01008382    GECZ01001229    JAS61387.1    JAS68540.1    CH477447    EAT40743.1    GBXI01013553    GBXI01011543    JAD00739.1    JAD02749.1    GALA01001618    JAA93234.1    GFDL01014408    JAV20637.1    GECU01006387    JAT01320.1    GFDL01014414    JAV20631.1    GFDF01002369    JAV11715.1    GALA01001621    JAA93231.1    CH964101    EDW79392.1    GANO01003190    JAB56681.1    OUUW01000002    SPP76200.1    CH379069    EAL30989.2    CH479188    EDW40445.1    GAMC01003609    JAC02947.1    CH933809    EDW18896.1    CH940647    EDW69933.1    GFTR01005653    JAW10773.1    DS232032    EDS32670.1    GDKW01002663    JAI53932.1    GBGD01001809    JAC87080.1    JXJN01005581    CM000159    EDW95394.1    EDW95402.1    CP012525    ALC43834.1    GECL01003299    JAP02825.1    ATLV01023461    KE525343    KFB49225.1    AE014296    BT044429    AAF49216.1    ACH92494.1    AY058314    AAL13543.1    GEDC01028312    JAS08986.1    CCAG010023908    EZ424138    ADD20414.1    CH916366    EDV97611.1    ADMH02001647    ETN61570.1    APCN01001747    AAAB01008980    EAA14306.3    CH902618    EDV40997.1    CH954178    EDV52303.1    KQ982603    KYQ53976.1    GFDG01001397    JAV17402.1    KQ980522    KYN15683.1    KQ976601    KYM79433.1    GEDC01025962    JAS11336.1    GGFM01002036    MBW22787.1    GGFM01006915    MBW27666.1    GGFJ01005599    MBW54740.1    AXCN02000691    APGK01044519    KB741026    KB632309    ENN74947.1    ERL92079.1    KA645440    AFP60069.1    GGFJ01005600    MBW54741.1    GL888087    EGI67762.1    BT126893    AEE61855.1    CM002912    KMZ00463.1    GGFK01001782    MBW35103.1    GGFK01001799    MBW35120.1    AXCM01002017    ADTU01017045    ADTU01017046    KQ434803    KZC05997.1    KZ288422    PBC25967.1    UFQS01000514    UFQT01000514    SSX04527.1    SSX24890.1    GL449978    EFN81629.1    GBHO01040473    GBHO01015150    GBRD01010383    GDHC01013418    GDHC01006405    JAG03131.1    JAG28454.1    JAG55441.1    JAQ05211.1    JAQ12224.1    KQ780658    OAD51912.1    LJIG01022516    KRT80161.1    KQ978068    KYM97568.1    KK107894    EZA47320.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000215335    + More
UP000069940    UP000249989    UP000002358    UP000008820    UP000007798    UP000268350    UP000001819    UP000008744    UP000092445    UP000009192    UP000095300    UP000008792    UP000091820    UP000075880    UP000002320    UP000078200    UP000092443    UP000092460    UP000002282    UP000092553    UP000030765    UP000000803    UP000092444    UP000001070    UP000000673    UP000075902    UP000075882    UP000076407    UP000075840    UP000007062    UP000007801    UP000192221    UP000008711    UP000075809    UP000075903    UP000078492    UP000078540    UP000069272    UP000192223    UP000075886    UP000019118    UP000030742    UP000075885    UP000095301    UP000075881    UP000005203    UP000007755    UP000076408    UP000075883    UP000005205    UP000076502    UP000075884    UP000242457    UP000075901    UP000075900    UP000075920    UP000008237    UP000078542    UP000053097   

PRIDE

Q19P04    H9JP54    Q9VVU1    Q95U46    A0A088AFJ0   

Pfam

PF00441   Acyl-CoA_dh_1        + More
PF02771   Acyl-CoA_dh_N
PF02770   Acyl-CoA_dh_M

Interpro

IPR037069   AcylCoA_DH/ox_N_sf        + More
IPR036250   AcylCo_DH-like_C       
IPR013786   AcylCoA_DH/ox_N       
IPR006089   Acyl-CoA_DH_CS       
IPR009075   AcylCo_DH/oxidase_C       
IPR006091   Acyl-CoA_Oxase/DH_cen-dom       
IPR009100   AcylCoA_DH/oxidase_NM_dom       

SUPFAM

SSF47203   SSF47203        + More
SSF56645   SSF56645       

Gene 3D

1.10.540.10    

ProteinModelPortal

Q19P04   H9JP54   A0A3S2TKV3   A0A068FKB7   A0A2H1WIL0   A0A2A4JN39   + More
A0A0N1PFX2   I4DJW7   A0A194QDY8   S4PDU4   A0A034VXN0   A0A232FGL5   A0A182G6W1   K7J9F0   A0A0K8VCB6   A0A1B6H1P6   Q171S4   A0A0A1WUM1   T1D2H1   A0A1Q3EZA1   A0A1B6JQ28   A0A1Q3EZA4   A0A1L8DZL3   T1DGK4   B4N4V3   U5EQP8   A0A3B0JLC2   Q2M0E5   B4GRR0   W8C7I0   A0A1A9Z3D4   B4KZ04   A0A1I8QF43   B4LD52   A0A224XRK2   A0A1A9WFH3   A0A182IQS2   B0WQ26   A0A0P4VIT3   A0A069DT04   A0A1A9VYL2   A0A1A9XWJ0   A0A1B0AYA1   B4PH24   A0A0M4EDV0   A0A0V0G445   A0A084WG81   Q9VVU1   Q95U46   A0A1B6C654   D3TRT6   B4IYD8   W5JFB0   A0A182TMV4   A0A182KTZ0   A0A182XG95   A0A182HRU4   Q7Q1H8   B3M858   A0A1W4UP90   B3NDU9   A0A151X142   A0A1L8EFA1   A0A182UUR6   A0A151J1L4   A0A151I0M2   A0A182F2X3   A0A1B6CCZ7   A0A2M3Z2P1   A0A2M3ZGJ3   A0A1W4X7P8   A0A2M4BNT2   A0A182Q7G7   N6U8L7   A0A182P4C1   T1PBC4   A0A182JQ47   A0A2M4BP67   A0A088AFJ0   F4WDI2   A0A182YDE2   J3JUH9   A0A0J9RY01   A0A2M4A2S4   A0A2M4A328   A0A182MSQ2   A0A158NIP9   A0A154P2B0   A0A182NBU2   A0A2A3E2N0   A0A182SGH3   A0A336KJB0   A0A182REX5   A0A182WGL9   E2BRN5   A0A0A9Y8G7   A0A310S473   A0A0T6AYJ6   A0A195CBT9   A0A026VUH3  

PDB

2JIF     E-value=4.62272e-120,     Score=1102

KEGG

733139    K09478 short/branched chain acyl-CoA dehydrogenase [EC:1.3.99.12] | (RefSeq) Acade; acyl-coenzyme A

PATHWAY

00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0003995   GO:0050660   GO:0016491   GO:0005829   GO:0005739   GO:0016627   GO:0008152   GO:0016020   GO:0016787   GO:0004713   GO:0015930   GO:0055114  

Length:

332

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0829699999999999

Exp number, first 60 AAs:

0.01708

Total prob of N-in:

0.01076

outside

1  -  332

 

 

Pi

247.816198

Theta

188.276227

Tajima's D

2.059937

CLR

0.115181

CSRT

0.889405529723514

Interpretation

Uncertain