Silkworm Genome Informatics Database

Gene

KWMTBOMO13919

Pre Gene Modal

BGIBMGA011301

Annotation

PREDICTED:_uncharacterized_protein_LOC101744574_[Bombyx_mori]

Location

Bomo_Chr23(+):13142303-13222956 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.458

CDS

ATGGCGTTTGTTTGCCCAACGATGGGCATCACGAACAGGGATCTCTTAGTGTTAGTTCTGTTGTTTTGCCGGACAATAGTTTGTGACAGTCAGTGTCCGAAGTTTGCCGGGAAACCTTTGGAGACGAGGGTTCAAGACGCTTCGATCGTCTTCAGAGCTGTCGTTGTCCAGACGCATTTTCAGCGGAAGACATTAGATTTGGCGCTGGTGTCCATATACAGGGGTGGTTTGGAATTAGCGTCCGTGAGCCAATATATGGGATCACCATACAATACCACGGATAGACAGGTGAACTTTAAAATAAGTCCACAACTTAGTGGTTGCTTTAATTGGAGCATGGAACCTTCCCAAAGTGAGCTGGTGGTCTTCGCAAGGATCAGTGCACCGGCAGTAGATTTAGAAACCACCCCTCCTGATGGTCCATGGTTGGAGGCGACTGCGGCAGCGGTACCTTGGACTCTAGGTGTGGATATCGCTATATGGAATGCTGTAGGGTGGGGCGGCTGGGGCGAGTGGGGGTCCTGCAGCAGAACTTGTGGGGGTGGGAGGCAAACCCGAAGAAGATACTGCTCGAGGGCCACCTGCGAGGGGTATGGCGAACAAGCGAGATCGTGTAATTCCTTTGATTGCGAAGGTACAATAAACCCTTTAGCACCAGGTGCAAGAAGAAACTTCCACCCGGCCCAAGCCAGATGGGGCCCAGTGCAGGACAGACCTCATGCTTTCAGCCTAAGGCCAAACTCGTACATCTGGATTGCATCATCGGAGCTCTTCAATAACGGAAAAACTTTTCCCAGAGAATTCACCCTTTTTATATCATTGAGGCTTAGACCAGAGAGTGGTGGATACGGGCAAGGAACGCTGTTTTCGCTCCGATCAAGACGCCGCACTGGTTCGTTTCTTTCACTGGAACTAGCTGGCCGGGGTGCAGCTAGACTGGTCCATGCTGGAGCTGGAACCTCAAGGTCAATTTACTTAGCAGTACCACTGTACGACTTCCGATGGCATCACATAGCAATCAGTGTGCACGATGACAACACAGTACGTGCTTTCGTGGACTGCCGTTGGTTGAGGACCGATGTCCTTGAGAAGGACGCTCTTGACACGCCAAGGGACGCCGACCTTATTATCGGTTATCTGTTCTCGGGCGATTTAGAACAGTTAGTGCTGGTGCCAAAAGCCGGACAAGCCCAGAAGCAATGCTCGAGCCAAGTTTCAGGGGTATTGACACCTTACGTCACACACGGCGACTAG

Protein

MAFVCPTMGITNRDLLVLVLLFCRTIVCDSQCPKFAGKPLETRVQDASIVFRAVVVQTHFQRKTLDLALVSIYRGGLELASVSQYMGSPYNTTDRQVNFKISPQLSGCFNWSMEPSQSELVVFARISAPAVDLETTPPDGPWLEATAAAVPWTLGVDIAIWNAVGWGGWGEWGSCSRTCGGGRQTRRRYCSRATCEGYGEQARSCNSFDCEGTINPLAPGARRNFHPAQARWGPVQDRPHAFSLRPNSYIWIASSELFNNGKTFPREFTLFISLRLRPESGGYGQGTLFSLRSRRRTGSFLSLELAGRGAARLVHAGAGTSRSIYLAVPLYDFRWHHIAISVHDDNTVRAFVDCRWLRTDVLEKDALDTPRDADLIIGYLFSGDLEQLVLVPKAGQAQKQCSSQVSGVLTPYVTHGD

Uniprot

A0A212EXM7 A0A194QPV2 A0A194PL95 A0A2H1VIT4 A0A2A4IUR5 A0A1B6EEE7 + More
A0A2S2NI47 A0A2S2QH71

Pubmed

22118469 26354079

EMBL

AGBW02011720 OWR46235.1 KQ461185 KPJ07399.1 KQ459601 KPI94097.1 + More
ODYU01002786 SOQ40711.1 NWSH01006331 PCG63505.1 GEDC01000982 JAS36316.1 GGMR01003827 MBY16446.1 GGMS01007884 MBY77087.1

Proteomes

UP000007151 UP000053240 UP000053268 UP000218220

Pfam

PF00090 TSP_1 + More
PF02210 Laminin_G_2

Interpro

IPR036383   TSP1_rpt_sf        + More
IPR000884   TSP1_rpt
IPR001791   Laminin_G
IPR013320   ConA-like_dom_sf
IPR000742   EGF-like_dom
IPR013032   EGF-like_CS

SUPFAM

SSF49899 SSF49899 + More
SSF82895 SSF82895

Gene 3D

2.20.100.10

ProteinModelPortal

A0A212EXM7 A0A194QPV2 A0A194PL95 A0A2H1VIT4 A0A2A4IUR5 A0A1B6EEE7 + More
A0A2S2NI47 A0A2S2QH71

KEGG

101744574 no KO assigned | (RefSeq) uncharacterized LOC101744574

GO

SignalP

Position: 1 - 28, Likelihood: 0.638545

Length:

417

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0405900000000002

Exp number, first 60 AAs:

0.02498

Total prob of N-in:

0.00373

outside

1 - 417

Pi

247.290443

Theta

175.492882

Tajima's D

1.375613

CLR

0.399622

CSRT

0.758462076896155

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics