SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13910
Pre Gene Modal
BGIBMGA011423
Annotation
putative_cuticle_protein_CPG42_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.787
 

Sequence

CDS
ATGTTGACAATTCTGATATTCGCTTCGATCAGTCTTTCGACGGCGACTTTCCACAGAGTCGAATTATCGGACACGAAAACTCCCTATGATTATGTTAAAGAACGCTTGGATGCCATAGGAACTGATGTGAAGACTGGACTGCCGCTATCTAACAGTTACGAAGTTGAAGAGAACGAAGACTATCCAGAACACATCGAAGGTGCTGCATCTACTGTCTTAAATACAGTGACAGGAGTGGGTGGCATTAGAGGAGTCGGTGTTGGGGGAATCGGCCTTAACCAAGGATTAGGTTATGGTGGAATTGGATTGGGTGGTCTTGGACTTGGACAAGGATTAGGTATTGGACTCGGAGGTGTGGGAGGCGTTGGCGGCATCGGTGGCGGTGTTGGAGGACTTGGCAGCGGAATCGGAATCGGTAACGGTGTTGGACTTATAAACCAAGGTATTGGAGGCCTTGGAGTTGGAGGTATAGGACTTGGCGGAGGATTAGGAGGAGGGCTTCTTTACCATCCCATTTTGGGGGCTCAAGTCGGTGCTGGTTACGTCGATAAAAATGCCTATGATGCCGCTCAGAAGAAAGGGGCTGGTGAAAACATTGAAAAAATTGAAAAAAAAGCTGAAGAAGAAACTAAGCACGGTCAAGAAGGATTTCAACAGGCTGCCGCAGCTGCTAAGGCTGAGAAAGGAGAATCAAGTTTCTACAAAGACGAGGAAGCAAAGAAGAAGGCCGCTGGTGATGAAAAATTCTACGAAGGCGGACAGAAGATTGATAAACACGGAGCCAACGAAGAATCACTGAAGAAAGCAAAGAGTCACAAAAAGGGACATGTCAGCAAAGGCTTCAAGTCCTCGAGTAGCAAGAATGAAGAAGAAAAAACGGAGAGCTTTTACGATGAAGCTCACGACGAAGCAGACCATAAGATTGCCGGACAAAACGCTGGCTCGTTTGGTGAAAAGGCACAGCAAGGTTTTAAAGGTGCTCACGAAGAGAAAATCCTCGACGCAAATGCTCAAGGAAAAGAAGGGCATCACGTTTCCGAACAGAAAATCGACGATTCTAAAGCGAACAAGGGAGAATTCCTGCAGAAGGGCTACAAAGGCGGGGCTGAACAACTCGAGAAATTCAATAATTTGGGAGCTCATTCCGTGCACGGACACCAAGAGTCCAGCGGCGGCTACCAGCAGAATAAGGGAGTATTGCCAATACACGCTTAA
Protein
MLTILIFASISLSTATFHRVELSDTKTPYDYVKERLDAIGTDVKTGLPLSNSYEVEENEDYPEHIEGAASTVLNTVTGVGGIRGVGVGGIGLNQGLGYGGIGLGGLGLGQGLGIGLGGVGGVGGIGGGVGGLGSGIGIGNGVGLINQGIGGLGVGGIGLGGGLGGGLLYHPILGAQVGAGYVDKNAYDAAQKKGAGENIEKIEKKAEEETKHGQEGFQQAAAAAKAEKGESSFYKDEEAKKKAAGDEKFYEGGQKIDKHGANEESLKKAKSHKKGHVSKGFKSSSSKNEEEKTESFYDEAHDEADHKIAGQNAGSFGEKAQQGFKGAHEEKILDANAQGKEGHHVSEQKIDDSKANKGEFLQKGYKGGAEQLEKFNNLGAHSVHGHQESSGGYQQNKGVLPIHA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.775470
 
 
Length:
404
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
61.23144
Exp number, first 60 AAs:
1.126
Total prob of N-in:
0.51095
outside
1  -  404
 
 

Population Genetic Test Statistics

Pi
265.772959
Theta
198.560189
Tajima's D
0.968111
CLR
0.007453
CSRT
0.648717564121794
Interpretation
Uncertain
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