Gene

KWMTBOMO13887  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011586

Annotation

UPF0414_transmembrane_protein-like_protein_[Operophtera_brumata]

Location

Bomo_Chr23(+):12146518-12147144      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.485

CDS

ATGTCCAGGCTACGATTTGGCAGATCGAACGACGGATATCGTCTCGTATCCAATGATGATAGTGGTTTCTCTGACGCTCAGTTTGAAGCACCACCACCGAAGATTCCATGGAAAGCCATAACATTAGCTGCATTTCTGTTTTTGGTCGGGACAATCCTTCTTATAGTTGGAAGCTTGATAGTGACTGGTCACATTGACACAAAATATTCAGATAGGTTGTGGCCTATGATCATTTTAGGAGGCATAATGTTTCTTCCTGGAGCTTATCACATAAGGATAGCGTACTGCGCATATAAGCAGTATCCAGGATATAGTTTTACAGACATTCCAGAATTTGATTAG

Protein

MSRLRFGRSNDGYRLVSNDDSGFSDAQFEAPPPKIPWKAITLAAFLFLVGTILLIVGSLIVTGHIDTKYSDRLWPMIILGGIMFLPGAYHIRIAYCAYKQYPGYSFTDIPEFD

Uniprot

H9JPY1   A0A3S2TKG0   A0A2H1VVT8   A0A0L7LUZ8   A0A1E1W7Q0   A0A194PKW2   + More
A0A212FJU9   S4P2K1   E2C2C8   A0A310SET0   A0A0L7RH81   A0A232ET73   A0A088ALX5   A0A2A3E6T5   V9IJ24   A0A0M9A519   E2A1A4   A0A195D484   A0A195FYC9   A0A158NW03   A0A0T6AT70   A0A3L8DRF9   A0A0L8GKZ3   A0A139WN02   D6WBE8   A0A139WNF0   A0A026VZI8   A0A2B4RXE2   A0A3S0ZE22   A7SGM3   V3YXQ9   A0A3M6UN94   A0A210PYE6   A0A2J7QSK5   E9IHP0   A0A2C9JS79   R7TIJ4   A0A067QKY9   A0A293MVV7   E9FX17   A0A1S3H695   E0VYH1   T1HHR5   A0A0P4VG39   A0A0L8GL64   U5EXC0   A0A087UXR2   T1ISH7   A0A1B6I2J4   A0A2T7P7J2   A0A1B6ETI5   A0A1B6GED5   A0A1B6H2C1   B7QFU0   A0A1D2NJ41   A0A023G805   G3MQP7   A0A0N5DPI7   A0A3Q2DAI5   Q68EJ3   A0A3Q3IRE2   A0A131XHK2   A0A085ME37   A0A3B3H4T2   A0A3P9JN44   W4YZB9   T2M8D7   A0A0P5H910   A0A3P8UHB4   A0A077Z0A1   A0A164VF87   A0A0N7ZNE2   A0A0N8AFS2   A0A224YZF5   A0A131Z1C2   A0A3P8WP49   A0A0N8DV25   A0A146ZL98   K4G0B7   A0A3Q3IHX7   C3Z0I7   L7M5U7   A0A0P6I659   V9L867   H2ZK77   B5X879   A0A0S7LRK3   A0A0E9X6P3   A0A3B3Z193   A0A3B3TY01   A0A1W4YFA7   A0A3Q3X078   M3ZIJ8   A0A060VWQ0   V9L8V3   A0A0C9S9K9   H2RR19   A0A087YAH9   C1BJ42   C1BX22  

Pubmed

19121390    26227816    26354079    22118469    23622113    20798317    + More
28648823    21347285    30249741    18362917    19820115    24508170    17615350    23254933    30382153    28812685    21282665    15562597    24845553    21292972    20566863    27129103    27289101    22216098    23594743    28049606    24929829    17554307    24065732    24487278    28797301    26830274    23056606    18563158    25576852    24402279    20433749    25613341    23542700    24755649    26131772    21551351    25069045   

EMBL

BABH01015513    RSAL01000081    RVE48562.1    ODYU01004734    SOQ44923.1    JTDY01000071    + More
KOB79036.1    GDQN01008079    JAT82975.1    KQ459601    KPI94071.1    AGBW02008229    OWR53980.1    GAIX01009967    JAA82593.1    GL452124    EFN77878.1    KQ760561    OAD59791.1    KQ414590    KOC70332.1    NNAY01002322    OXU21551.1    KZ288370    PBC26751.1    JR048364    AEY60642.1    KQ435753    KOX76093.1    GL435730    EFN72798.1    KQ976870    KYN07697.1    KQ981169    KYN45312.1    ADTU01027611    LJIG01022876    KRT78276.1    QOIP01000005    RLU23025.1    KQ421356    KOF77661.1    KQ971312    KYB29398.1    EEZ98724.1    KYB29397.1    KK107538    EZA49152.1    LSMT01000275    PFX21469.1    RQTK01000635    RUS76792.1    DS469654    EDO37093.1    KB203854    ESO82838.1    RCHS01001119    RMX55136.1    NEDP02005386    OWF41502.1    NEVH01011876    PNF31566.1    GL763289    EFZ19906.1    AMQN01002608    KB309694    ELT93559.1    KK853313    KDR08632.1    GFWV01018722    MAA43450.1    GL732526    EFX88337.1    DS235845    EEB18427.1    ACPB03019965    GDKW01003501    JAI53094.1    KOF77663.1    GANO01002608    JAB57263.1    KK122182    KFM82151.1    JH431432    GECU01026549    GECU01010011    JAS81157.1    JAS97695.1    PZQS01000005    PVD29395.1    GECZ01028568    GECZ01022808    GECZ01018191    GECZ01014570    GECZ01013313    GECZ01006475    JAS41201.1    JAS46961.1    JAS51578.1    JAS55199.1    JAS56456.1    JAS63294.1    GECZ01008970    JAS60799.1    GECZ01028901    GECZ01000940    JAS40868.1    JAS68829.1    ABJB010832055    DS927877    EEC17712.1    LJIJ01000026    ODN05271.1    GBBM01006388    JAC29030.1    JO844198    AEO35815.1    AL928672    BC080236    AAH80236.1    GEFH01002983    JAP65598.1    KL363199    KFD55483.1    AAGJ04077390    HAAD01002005    CDG68237.1    GDIQ01229769    JAK21956.1    HG805854    CDW53471.1    LRGB01001361    KZS12264.1    GDIP01228401    JAI95000.1    GDIP01151761    JAJ71641.1    GFPF01008557    MAA19703.1    GEDV01004007    JAP84550.1    GDIQ01089068    JAN05669.1    GCES01019618    JAR66705.1    JX052758    AFK10986.1    GG666568    EEN54035.1    GACK01006511    JAA58523.1    GDIQ01016232    JAN78505.1    JW875473    AFP07990.1    BT047248    BT125152    ACI67049.1    ADM15893.1    GBYX01153449    JAO92063.1    GBXM01010318    JAH98259.1    FR904268    CDQ56740.1    JW875900    AFP08417.1    GBZX01003128    JAG89612.1    AYCK01000971    BT074621    BT074689    ACO09045.1    BT079151    ACO13575.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000053268    UP000007151    UP000008237    + More
UP000053825    UP000215335    UP000005203    UP000242457    UP000053105    UP000000311    UP000078542    UP000078541    UP000005205    UP000279307    UP000053454    UP000007266    UP000053097    UP000225706    UP000271974    UP000001593    UP000030746    UP000275408    UP000242188    UP000235965    UP000076420    UP000014760    UP000027135    UP000000305    UP000085678    UP000009046    UP000015103    UP000054359    UP000245119    UP000001555    UP000094527    UP000046395    UP000265020    UP000000437    UP000261600    UP000001038    UP000265180    UP000265200    UP000007110    UP000265120    UP000030665    UP000076858    UP000001554    UP000007875    UP000087266    UP000261480    UP000261500    UP000192224    UP000261620    UP000002852    UP000193380    UP000005226    UP000028760    UP000265140   

PRIDE

H9JPY1   

Pfam

PF05915   DUF872

Interpro

IPR008590   DUF872_TM       

ProteinModelPortal

H9JPY1   A0A3S2TKG0   A0A2H1VVT8   A0A0L7LUZ8   A0A1E1W7Q0   A0A194PKW2   + More
A0A212FJU9   S4P2K1   E2C2C8   A0A310SET0   A0A0L7RH81   A0A232ET73   A0A088ALX5   A0A2A3E6T5   V9IJ24   A0A0M9A519   E2A1A4   A0A195D484   A0A195FYC9   A0A158NW03   A0A0T6AT70   A0A3L8DRF9   A0A0L8GKZ3   A0A139WN02   D6WBE8   A0A139WNF0   A0A026VZI8   A0A2B4RXE2   A0A3S0ZE22   A7SGM3   V3YXQ9   A0A3M6UN94   A0A210PYE6   A0A2J7QSK5   E9IHP0   A0A2C9JS79   R7TIJ4   A0A067QKY9   A0A293MVV7   E9FX17   A0A1S3H695   E0VYH1   T1HHR5   A0A0P4VG39   A0A0L8GL64   U5EXC0   A0A087UXR2   T1ISH7   A0A1B6I2J4   A0A2T7P7J2   A0A1B6ETI5   A0A1B6GED5   A0A1B6H2C1   B7QFU0   A0A1D2NJ41   A0A023G805   G3MQP7   A0A0N5DPI7   A0A3Q2DAI5   Q68EJ3   A0A3Q3IRE2   A0A131XHK2   A0A085ME37   A0A3B3H4T2   A0A3P9JN44   W4YZB9   T2M8D7   A0A0P5H910   A0A3P8UHB4   A0A077Z0A1   A0A164VF87   A0A0N7ZNE2   A0A0N8AFS2   A0A224YZF5   A0A131Z1C2   A0A3P8WP49   A0A0N8DV25   A0A146ZL98   K4G0B7   A0A3Q3IHX7   C3Z0I7   L7M5U7   A0A0P6I659   V9L867   H2ZK77   B5X879   A0A0S7LRK3   A0A0E9X6P3   A0A3B3Z193   A0A3B3TY01   A0A1W4YFA7   A0A3Q3X078   M3ZIJ8   A0A060VWQ0   V9L8V3   A0A0C9S9K9   H2RR19   A0A087YAH9   C1BJ42   C1BX22  

KEGG

101739705    no KO assigned | (RefSeq) transmembrane protein 230

GO

GO:0016021  

Length:

113

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

43.63791

Exp number, first 60 AAs:

19.85245

Total prob of N-in:

0.77495

POSSIBLE N-term signal

sequence

outside

1  -  38

TMhelix

39  -  61

inside

62  -  72

TMhelix

73  -  95

outside

96  -  113

 

 

Pi

200.952434

Theta

197.939589

Tajima's D

0.06324

CLR

0

CSRT

0.387530623468827

Interpretation

Uncertain