Silkworm Genome Informatics Database

Gene

KWMTBOMO13880

Pre Gene Modal

BGIBMGA011582

Annotation

Kv_channel-interacting_protein_4_[Papilio_xuthus]

Location

Bomo_Chr23(+):12044608-12049511 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.46

CDS

ATGGCTGATGAAAAGAAGGGAGAAAACGAACACATTAATCTGAAAGTATTAGGTCAAGATAACGCAATTGTACAATTCAAAATAAAGAAACACACACCTCTCAGGAAATTGATGAATGCTTATTGTGATAGAGCAGGTCTATCAATGCAGGTAGTGCGATTCAGATTTGATGGGCAACCAATAAATGAGAATGACACTCCAACATCACTTGAGATGGAAGAGGGCGACACAATAGAGGTTTACCAACAGCAGACCGGAGGAGTGTCCCTAGTCTTTATTATTGCCAAGGAGGCTAATACCGCCCAATACGCGCACTATGTATTCAACACATTGGACCAAGACAGAAGTGGATTGTTAAGTTTTGAGGAGTTTGTGACTGGATTATCGATCCTGTCGAGGGGAACTTTGGAAGAAAAGCTGCGATGGACTTTCTCTTTATATGATATTAACGGCGACGGTTACATTACCAAAGAAGAGATGACAGAAATTGTTTCAGCGATATACGATCTCATGGGCAAGATCGTTGAACCCATCGTCGATGACGACGTAGTTAGAGATAAAGTTGAAAGACTATTCCAGAAAATGGATCTGAATCGCGATGGTGTGCTAACATTGGACGAATTTCTGGATTGCTGCCTACGCGACGAAGAAATTTCCAGATCAATGGGTGTCTTTGACAGCAACTTCTGA

Protein

MADEKKGENEHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGGVSLVFIIAKEANTAQYAHYVFNTLDQDRSGLLSFEEFVTGLSILSRGTLEEKLRWTFSLYDINGDGYITKEEMTEIVSAIYDLMGKIVEPIVDDDVVRDKVERLFQKMDLNRDGVLTLDEFLDCCLRDEEISRSMGVFDSNF

Uniprot

A0A194PM55 A0A2H1X387 A0A194RII5 A0A2A4JIT8 K1QKC5

Pubmed

26354079 22992520

EMBL

KQ459601 KPI94063.1 ODYU01013068 SOQ59737.1 KQ460205 KPJ17140.1 + More
NWSH01001408 PCG71343.1 JH818480 EKC37182.1

Proteomes

UP000053268 UP000053240 UP000218220 UP000005408

Pfam

PF13833   EF-hand_8        + More
PF11976   Rad60-SLD
PF13499   EF-hand_7
PF13405   EF-hand_6

Interpro

IPR000626   Ubiquitin_dom        + More
IPR018247   EF_Hand_1_Ca_BS
IPR033950   Sumo
IPR028846   Recoverin
IPR022617   Rad60/SUMO-like_dom
IPR029071   Ubiquitin-like_domsf
IPR002048   EF_hand_dom
IPR011992   EF-hand-dom_pair

SUPFAM

SSF47473 SSF47473 + More
SSF54236 SSF54236

CDD

cd01763 Sumo
cd00051 EFh

ProteinModelPortal

A0A194PM55 A0A2H1X387 A0A194RII5 A0A2A4JIT8 K1QKC5

PDB

2K1F E-value=4.76749e-42, Score=428

KEGG

101737377 no KO assigned | (RefSeq) Kv channel-interacting protein 1

GO

GO:0005509 GO:0016925 GO:0005515 GO:0006412 GO:0005524 GO:0016787 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR23055

Length:

229

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01516

Exp number, first 60 AAs:

0.00036

Total prob of N-in:

0.12479

outside

1 - 229

Pi

241.828163

Theta

203.018686

Tajima's D

0.816099

CLR

0.138176

CSRT

0.60181990900455

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics