SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13867
Pre Gene Modal
BGIBMGA011441
Annotation
PREDICTED:_uncharacterized_protein_LOC101738909_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 3.233
 

Sequence

CDS
ATGGATGTCTTTTTAACTGGTTTTCCTAAAAAGCTTTTGGTAGCTACAGCCTTAGTGGTGATGATAGCAATGTGTCTAACGCCGGCCGAGGCACGCACAGTGGAGCACAAGATCCGCCACGAGAGGCGGCACGAAGGCCTAGCACAGCCCACCAAAGAGATCTCCAGGCCCAGAACGGCCGAGCCTCGGCTGGACAAAAGACGGCCACACAGAAAAATGACACTGACCAAAGACTCGCCTGCGTTTGTTAGACAGAGAAGTGCATTAGCCGACCGCTTCAAAAACGCAATGACTAAAATTAAGAAGAAATTAAAGAACACAAGGACTTACTTCAACGAGGAACGGAGGGTGCTGAACGAGACCAGGGACTACAGGGAAGGGATGCCGTCCTGGTTGCCGGCGATCAACTTTGTCGACATACATTTTCACAACTACCGGAATCCACGCAGGACTAGTGCTTCGATATCAGAACGAAAATTTACATATCTGATGCCGAAGCTGTACAAGTCTCTAGTGGAGTTCCAAAGCATCTTCAAACACCTGAGCCAGGTCGAGGTTAATTTCGTGGACGACCCGTTCTACGTCTACAACAAAACACGTCAGGATCTCTTAACGAAGACCCTCAACAGGCTCGAGAGCACAATATTGGAGATCAGAGAGAACATGATGAGGACCCGCGTGCCGGTACCGAATGTGGGCCCAAACAAGAACATCGACATGCTGAGCTTAAAAGTCGACGCGCCGCAGTGTCTCAAACAGGATTACATAGCGTTTAGGGCATACGGTAACTTGCTTAACAACTGGTATCTAGAATTCAGATGTCCGTTTGGCAAAAAGGTGATAAACGACAAAATGCAATGCACCGCCTACGAGGCCAAACTAAAGGAGAAGAAAGAATCGAGGATGTCGAAAGCGAAGAAAACGCCCGCCAGTTGA
Protein
MDVFLTGFPKKLLVATALVVMIAMCLTPAEARTVEHKIRHERRHEGLAQPTKEISRPRTAEPRLDKRRPHRKMTLTKDSPAFVRQRSALADRFKNAMTKIKKKLKNTRTYFNEERRVLNETRDYREGMPSWLPAINFVDIHFHNYRNPRRTSASISERKFTYLMPKLYKSLVEFQSIFKHLSQVEVNFVDDPFYVYNKTRQDLLTKTLNRLESTILEIRENMMRTRVPVPNVGPNKNIDMLSLKVDAPQCLKQDYIAFRAYGNLLNNWYLEFRCPFGKKVINDKMQCTAYEAKLKEKKESRMSKAKKTPAS

Summary

Pfam
PF17132   Glyco_hydro_106
Interpro
IPR033400   RhaM        + More
IPR008979   Galactose-bd-like_sf       
SUPFAM
SSF49785   SSF49785       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 31,         Likelihood:  0.859339
 
 
Length:
311
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
13.55085
Exp number, first 60 AAs:
13.54555
Total prob of N-in:
0.55454
POSSIBLE N-term signal
sequence
outside
1  -  311
 
 

Population Genetic Test Statistics

Pi
259.653944
Theta
207.069517
Tajima's D
0.68313
CLR
0.012447
CSRT
0.569721513924304
Interpretation
Uncertain
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