Gene

KWMTBOMO13860

Pre Gene Modal

BGIBMGA011578

Annotation

PREDICTED:_dehydrodolichyl_diphosphate_syntase_complex_subunit_Nus1_[Amyelois_transitella]

Location

Bomo_Chr23(+):11395899-11397331      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.485 PlasmaMembrane   Reliability : 1.086

CDS

ATGCTGTCACGATTGCTTCGACAGTTCTTGTTTGCTTTGCTACATTTGATTTTAAATTTTATTGTTGGTGCTCAGAATGTCTATTGCAGATATTGGCTTAAAAAGCACAGTTTACAAGACTATGAGGTGACAAAAACTGATTTAAAGCTAATAGTGAAGCATATACCGAAACTCAGTAAACAACCAAAGCATTTAGTTGTTTTATCTGATAGCGATTACCATTCAATAGATGATTTGGCTCGAATGGTGATATGGAGTTTAGTAGCCGGAATACCGTTTTTAAGTTTTTATGATGTATCAGGTCAACTTTCATATCAAGAAGAAAAACTTTTTAATGCAGTTGAGAAGAACAAGAAAGGTGTTCCGGGGTGTATAAAATGGTCAAAGAAACCTGATTTGAATGGGTATACAAATGGCATTCCTGCACATAAAATTGTTGTGAATATTTTTTCTTGTCAGAACGGACGTTCCACAATTACACAATGTATCAAAGAAATGTGTGAGGAAAAAATTCCATATAATAGAAAAAGTGACCAAATTACCGCACAAGAATTTGATGATGTGATATCAGCAGTATACCCTTCCATTCCAGATCCTGATTTAGCATTATTTTCAGGTCCAGTTTGTTGTACACATGGTTTATTGCCATGGCAAATAAGACTTACAGAGTTCATAAGTTTATCAGTTGACTATAATTTAAGTGTTGAAAGCTTTGTAGGTGCTATGTATAAATATAGTAAATGCGATCAAAGATTTGGAACGTAA

Protein

MLSRLLRQFLFALLHLILNFIVGAQNVYCRYWLKKHSLQDYEVTKTDLKLIVKHIPKLSKQPKHLVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVEKNKKGVPGCIKWSKKPDLNGYTNGIPAHKIVVNIFSCQNGRSTITQCIKEMCEEKIPYNRKSDQITAQEFDDVISAVYPSIPDPDLALFSGPVCCTHGLLPWQIRLTEFISLSVDYNLSVESFVGAMYKYSKCDQRFGT

Uniprot

H9JPX3   A0A2A4JGL5   A0A2H1VL23   A0A194PM49   A0A0L7KWQ9   A0A212EX81   + More
A0A194RH33   A0A2J7QWE8   A0A2P8YZQ7   A0A067RFX1   A0A2M4BX99   A0A2M4BT06   A0A2M4AGN2   A0A2M4CVI8   A0A2M4AGD6   T1EB38   A0A023EMB0   A0A310S7J4   A0A1J1IXH5   A0A2M3Z6F0   A0A182K828   U5ENX2   D6X458   A0A1Y1KV15   A0A182FJW2   A0A1W4XB73   Q5TV29   A0A182N0K5   A0A1L8DNZ6   A0A1L8DC98   A0A1W4XLV0   A0A182V6G9   A0A182IAU9   A0A3B4AGZ0   Q0IEK1   A0A1L8DP96   A0A1L8DCJ2   A0A3B4T581   A0A1S4FMX5   A0A182XJW8   A0A182QX27   B0XA49   A0A0T6AVJ8   U6DIM8   G1LG09   A0A087ZR88   A0A182TKU2   A0A3B1J5I0   G9KEF0   A0A3Q7X1K2   A0A224YUK5   A0A1Q3F172   A0A182YCS9   A0A1B0EYY7   A0A286XBN4   M3YSC0   A0A2Y9JG39   A0A1B0DBF2   A0A023FL95   A0A3P4SAH1   A0A3P8SQ74   A0A1E1XC91   A0A182PT49   E0W2Z5   A0A131Z5M7   L7M103   A0A154PG12   A0A084VX55   A0A3P8SPA1   A0A3Q1GQS8   A0A3Q1C8K4   R0K1F3   A0A182RKX9   A0A3Q3KJL6   A0A3B4CA01   U3J7K8   A0A1B6F3M3   A0A2U3VRU0   A0A3Q1IR55   G3MHH7   A0A1B6HRA5   A0A3Q7NFX9   A0A3Q1IR32   A0A023GHH0   A0A2Y9HH19   A0A182LWH9   A0A023FZK1   A0A3Q1MAW4   V9KAS3   A7S2R9   F7DQU7   L9JDY3   D3ZFM4   A0A384AV47   A0A026W2S4   I3LLX5   E2RT93   A0A1A7Z6B1  

Pubmed

19121390    26354079    26227816    22118469    29403074    24845553    + More
24945155    26483478    18362917    19820115    28004739    12364791    14747013    17210077    25463417    17510324    20010809    25329095    23236062    28797301    25244985    21993624    28503490    20566863    26830274    25576852    24438588    23749191    22216098    19393038    24402279    17615350    19892987    23385571    15057822    15632090    24508170    30249741    16341006   

EMBL

BABH01015454    NWSH01001527    PCG70959.1    ODYU01003129    SOQ41501.1    KQ459601    + More
KPI94058.1    JTDY01004856    KOB67672.1    AGBW02011818    OWR46099.1    KQ460205    KPJ17133.1    NEVH01009765    PNF32913.1    PYGN01000264    PSN49733.1    KK852498    KDR22627.1    GGFJ01008491    MBW57632.1    GGFJ01007066    MBW56207.1    GGFK01006467    MBW39788.1    GGFL01005043    MBW69221.1    GGFK01006471    MBW39792.1    GAMD01000373    JAB01218.1    JXUM01099917    GAPW01003155    KQ564528    JAC10443.1    KXJ72130.1    KQ765605    OAD53837.1    CVRI01000063    CRL04847.1    GGFM01003267    MBW24018.1    GANO01003909    JAB55962.1    KQ971379    EEZ97509.1    GEZM01075730    JAV64000.1    AAAB01008846    EAL41212.3    GFDF01005908    JAV08176.1    GFDF01009996    JAV04088.1    APCN01001344    CH477600    EAT38464.1    GFDF01005909    JAV08175.1    GFDF01009997    JAV04087.1    AXCN02002228    DS232564    EDS43514.1    LJIG01022785    KRT78727.1    HAAF01010138    CCP81962.1    ACTA01058316    ACTA01066316    JP014677    AES03275.1    GFPF01007135    MAA18281.1    GFDL01013743    JAV21302.1    AJWK01020210    AAKN02003430    AEYP01006470    AEYP01006471    AJVK01029928    GBBK01001871    JAC22611.1    CYRY02047280    VCX43246.1    GFAC01002482    JAT96706.1    DS235881    EEB20001.1    GEDV01001930    JAP86627.1    GACK01008265    JAA56769.1    KQ434896    KZC10762.1    ATLV01017849    KE525195    KFB42549.1    KB742860    EOB03407.1    ADON01052335    ADON01052336    ADON01052337    GECZ01025088    JAS44681.1    JO841328    AEO32945.1    GECU01030494    JAS77212.1    GBBM01002084    JAC33334.1    AXCM01000769    GBBL01000411    JAC26909.1    JW862297    AFO94814.1    DS469570    EDO41972.1    KB321023    ELW48806.1    AABR07045074    AABR07045075    CH474016    EDL92936.1    KK107522    QOIP01000001    EZA49334.1    RLU27287.1    AEMK02000001    AAEX03000391    HADX01016115    SBP38347.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000007151    UP000053240    + More
UP000235965    UP000245037    UP000027135    UP000069940    UP000249989    UP000183832    UP000075881    UP000007266    UP000069272    UP000192223    UP000007062    UP000075884    UP000075903    UP000075840    UP000261520    UP000008820    UP000261420    UP000076407    UP000075886    UP000002320    UP000008912    UP000005203    UP000075902    UP000018467    UP000286642    UP000076408    UP000092461    UP000005447    UP000000715    UP000248482    UP000092462    UP000265080    UP000075885    UP000009046    UP000076502    UP000030765    UP000257200    UP000257160    UP000075900    UP000261640    UP000261440    UP000016666    UP000245340    UP000265040    UP000286641    UP000248481    UP000075883    UP000009136    UP000001593    UP000002281    UP000011518    UP000002494    UP000261681    UP000053097    UP000279307    UP000008227    UP000002254   

PRIDE

H9JPX3    D3ZFM4   

Pfam

PF01255   Prenyltransf

Interpro

IPR001441   UPP_synth-like        + More
IPR036424   UPP_synth-like_sf       
IPR038887   Nus1/NgBR       

SUPFAM

SSF64005   SSF64005       

Gene 3D

3.40.1180.10    

ProteinModelPortal

H9JPX3   A0A2A4JGL5   A0A2H1VL23   A0A194PM49   A0A0L7KWQ9   A0A212EX81   + More
A0A194RH33   A0A2J7QWE8   A0A2P8YZQ7   A0A067RFX1   A0A2M4BX99   A0A2M4BT06   A0A2M4AGN2   A0A2M4CVI8   A0A2M4AGD6   T1EB38   A0A023EMB0   A0A310S7J4   A0A1J1IXH5   A0A2M3Z6F0   A0A182K828   U5ENX2   D6X458   A0A1Y1KV15   A0A182FJW2   A0A1W4XB73   Q5TV29   A0A182N0K5   A0A1L8DNZ6   A0A1L8DC98   A0A1W4XLV0   A0A182V6G9   A0A182IAU9   A0A3B4AGZ0   Q0IEK1   A0A1L8DP96   A0A1L8DCJ2   A0A3B4T581   A0A1S4FMX5   A0A182XJW8   A0A182QX27   B0XA49   A0A0T6AVJ8   U6DIM8   G1LG09   A0A087ZR88   A0A182TKU2   A0A3B1J5I0   G9KEF0   A0A3Q7X1K2   A0A224YUK5   A0A1Q3F172   A0A182YCS9   A0A1B0EYY7   A0A286XBN4   M3YSC0   A0A2Y9JG39   A0A1B0DBF2   A0A023FL95   A0A3P4SAH1   A0A3P8SQ74   A0A1E1XC91   A0A182PT49   E0W2Z5   A0A131Z5M7   L7M103   A0A154PG12   A0A084VX55   A0A3P8SPA1   A0A3Q1GQS8   A0A3Q1C8K4   R0K1F3   A0A182RKX9   A0A3Q3KJL6   A0A3B4CA01   U3J7K8   A0A1B6F3M3   A0A2U3VRU0   A0A3Q1IR55   G3MHH7   A0A1B6HRA5   A0A3Q7NFX9   A0A3Q1IR32   A0A023GHH0   A0A2Y9HH19   A0A182LWH9   A0A023FZK1   A0A3Q1MAW4   V9KAS3   A7S2R9   F7DQU7   L9JDY3   D3ZFM4   A0A384AV47   A0A026W2S4   I3LLX5   E2RT93   A0A1A7Z6B1  

KEGG

101738415    K19177 dehydrodolichyl diphosphate syntase complex subunit NUS1 [EC:2.5.1.87] | (RefSeq) dehydrodoli

PATHWAY

00900    Terpenoid backbone biosynthesis - Bombyx mori (domestic silkworm)

GO

GO:0016765   GO:1904423   GO:0019408   GO:0001525   GO:0016021   GO:0002040   GO:0032383   GO:0043536   GO:0045547   GO:0038084   GO:0005789   GO:0006489   GO:0051000   GO:0035268   GO:0042632   GO:0005622   GO:0005840   GO:0006412   GO:0005515   GO:0005524   GO:0016787   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR21528  

SignalP

Position:   1 - 24,         Likelihood:  0.805582

 

 

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

27.89428

Exp number, first 60 AAs:

17.49023

Total prob of N-in:

0.42264

POSSIBLE N-term signal

sequence

outside

1  -  254

 

 

Pi

232.24892

Theta

200.13522

Tajima's D

0.513066

CLR

0.326988

CSRT

0.520773961301935

Interpretation

Uncertain