Gene

KWMTBOMO13857

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr23(-):11363106-11367648      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.422

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAATTATTGCGTCGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAATTTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGATTCCAGCAGTTATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCATGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGCCTACCGTCGAGTTCGGGCATTTCCTGGACGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTCGCGGGGGACCTCAATGCGAAGTCTGTCGCATGGGGCTCCCCCCGCTCGAACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAATGCGGCCGGCCTCTGTCTGATGAATAGAGGGTCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCAAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACGCTGTCAGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGTCCACGGGGACCACCCCCGTGGTGCGTCCCGATCATTCCCTAAGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACGGTGGCGGCGTGGGCGCCCATGCGTCCACACCCGGTGGAGGTCGAGGGAGAGGCAGGGTGGTTCCGGGACACGATGCGTCGCATCTGTGATGCCTCGATGCCCCGGATCGGCCCTCGACTTCCTAATCGCCAGGCGTACTGGTGGTCGCCCGAAATTGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCGCCTGCCGCGGCGCAATGATCCGGTTGCGTTCGCGGCGGCAGAGGCCCGGCTGCACGGCGCATTTCGCGTCGCGCAGAGGGCATTGCAGCTGGCCATCAGAAGAGCCAAGGACCAACACATGGAGAGTCTCCTGGAGACGCTGGATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCGATCACGGAGCGTCTCCAGCCTCGGCAGCTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTGTTGCTCCTGCTATGGACGCGCCGCCGGAATACGACGGCGAAGCCCCTGCCGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGCGCGAAGGACACTGCACCCGGCCCGGACGGCGTCCATGGTCGGGTTTGGGCCTTGGCTCTTGGTGCCCTAGGGGACCGACTCTTGAGGCTTTATAACTCCTGCCTCGAGTCGGGACCGTTTCCTTCATCGTGGAGGACGGGCAGACTTGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCCGCCGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCGGCCCGTATCATCCAGCATCTGGTCAGGGTGGGACCCGATCTGTCGGCGGAGCAGTATGGCTTCCGAGAGGGCCGCTCAACGGTAGACGCGATCCTTCGCGTGCGGGCCCTCTCGGAGGAGGCCGTCTCCCGGGGTGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCTTTTAACACCCTGCCCTGGTCCGTGATAAGGGGAGCGCTGGAACGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAGGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTACTGAGGGGTGCCCTCCTCCCGGGCCTAAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGAGAGTTTTGCTGAGTCTGCCCGTCTTGCTACCGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGTATCGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAAAATCTGGTCCCTCGTCTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTTCTTCCCAACGTTGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGCGGCTATCGCACCATCTCCTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTTCTGGAAGCGGAGGCGCTCGCCGCTGACTATAAGTGGCGGGCTGACCTTCGTGCACGGGGCGTGGCACGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCTGACGGCAGAGTGCCACCATTGTGGTTGCGGCTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTTGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCAATGCTCGGTGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGCGAGACGCGCAGGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATTTCGCCCAAGCCCTGGCCCTCTAA

Protein

MEWTLKEDRVAIIASHRCGYAPIQIFNILKILNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRIPAVIKAVKARIQRNPKQVHFCEKGVKTNAVVYQNTVMTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPPTVEFGHFLDGIGAIARRLAPRPVILAGDLNAKSVAWGSPRSNARGRLLERWANAAGLCLMNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADVHGDHPRGASRSFPKWALKRLNKELLMEASTVAAWAPMRPHPVEVEGEAGWFRDTMRRICDASMPRIGPRLPNRQAYWWSPEIAQLRVECVRARRECARHRRRRLPRRNDPVAFAAAEARLHGAFRVAQRALQLAIRRAKDQHMESLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPRQLRDIVSALFPQEREGFVAPAMDAPPEYDGEAPAEVPHITGAELRVAVRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGPFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLVRVGPDLSAEQYGFREGRSTVDAILRVRALSEEAVSRGGVALAVSLDIANAFNTLPWSVIRGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGESFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYKWRADLRARGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAELTAECHHCGCGLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADFAQALAL

Uniprot

Q868Q4   Q8MY31   Q8MY35   Q8MY33   Q8MY27   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KJH4   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KF37   A0A0J7KYD2   A0A0J7KPR0   A0A0J7K3F1   A0A0J7KRB8   A0A3S2LNH8   A0A0J7KF40   A0A0J7N0R3   A0A0J7NAV8   A0A0J7MY17   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KQY4   A0A0J7MWN5   A0A2S2PEZ7   J9LVU7   A0A0J7KWU5   X1WJY4   A0A0J7KMG5   J9JWJ3   J9LJ80   A0A2S2NQQ6   A0A2H8TIE5   T1DCM0   A0A0J7NJI3   A0A2S2P7D1   X1WZ64   J9KJG8   J9KM84   A0A142LX45   J9KNS1   D6WC19   X1WXT5   A0A2M4BBV9   A0A2H8TR36   A0A2M4BDI3   A0A2M4BC01   J9KNN8   T1DG89   A0A2M4CS98   A0A2S2PRL8   A0A2S2NJ82   F7IYV5   T1DG59   A0A034WR48   F7IYV7   A0A2M4BC28   Q868S4   A0A023EW96   W8ANK7   W8ADE4   J9JY94   J9KUM6   J9LM37   A0A1W7R6I9   A0A0K8VPH1   F7IYU8   A0A2M4ADW9   A0A139W9J0   A0A139WAH4  

Pubmed

12644555    28756777    9092665    24330624    25527032    18362917    + More
19820115    25348373    24945155    24495485   

EMBL

AB090825    BAC57926.1    AB078931    BAC06456.1    AB078929    BAC06452.1    + More
AB078930    BAC06454.1    AB078935    BAC06462.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    LBMM01006954    KMQ90166.1    LBMM01006671    KMQ90407.1    LBMM01006657    KMQ90417.1    LBMM01004272    KMQ92618.1    LBMM01007036    KMQ90099.1    LBMM01008448    KMQ88867.1    LBMM01002052    KMQ95336.1    LBMM01004634    KMQ92224.1    LBMM01015025    KMQ84953.1    LBMM01003988    KMQ92922.1    RSAL01003504    RVE40273.1    LBMM01008422    KMQ88894.1    LBMM01012412    KMQ86235.1    LBMM01007425    KMQ89740.1    LBMM01014122    KMQ85315.1    LBMM01008278    KMQ89009.1    LBMM01005474    KMQ91485.1    LBMM01004262    KMQ92649.1    LBMM01015285    KMQ84870.1    GGMR01015159    MBY27778.1    ABLF02034925    LBMM01002480    KMQ94776.1    ABLF02011238    LBMM01005465    KMQ91492.1    ABLF02013358    ABLF02013361    ABLF02054869    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    GGMR01006838    MBY19457.1    GFXV01002090    MBW13895.1    GALA01001777    JAA93075.1    LBMM01004261    KMQ92650.1    GGMR01012748    MBY25367.1    ABLF02011183    ABLF02041884    ABLF02041886    ABLF02018942    ABLF02041885    KU543683    AMS38371.1    ABLF02018808    KQ971309    EEZ99146.1    ABLF02004854    ABLF02041317    GGFJ01001369    MBW50510.1    GFXV01003903    MBW15708.1    GGFJ01001727    MBW50868.1    GGFJ01001370    MBW50511.1    ABLF02023257    GALA01001776    JAA93076.1    GGFL01004044    MBW68222.1    GGMR01019493    MBY32112.1    GGMR01004600    MBY17219.1    AB593325    BAK38646.1    GALA01000302    JAA94550.1    GAKP01002292    JAC56660.1    AB593327    BAK38648.1    GGFJ01001439    MBW50580.1    AB090815    BAC57906.1    GAPW01000192    JAC13406.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    ABLF02007989    ABLF02041557    ABLF02014650    GEHC01000915    JAV46730.1    GDHF01029467    GDHF01011533    JAI22847.1    JAI40781.1    AB593321    BAK38639.1    GGFK01005660    MBW38981.1    KQ972226    KYB24577.1    KQ971388    KYB24913.1   

Proteomes

UP000036403    UP000283053    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF01421   Reprolysin
PF00098   zf-CCHC
PF12017   Tnp_P_element

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       
IPR021896   Transposase_37       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.40.390.10    

ProteinModelPortal

Q868Q4   Q8MY31   Q8MY35   Q8MY33   Q8MY27   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KJH4   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KF37   A0A0J7KYD2   A0A0J7KPR0   A0A0J7K3F1   A0A0J7KRB8   A0A3S2LNH8   A0A0J7KF40   A0A0J7N0R3   A0A0J7NAV8   A0A0J7MY17   A0A0J7KFH2   A0A0J7NFZ0   A0A0J7KQY4   A0A0J7MWN5   A0A2S2PEZ7   J9LVU7   A0A0J7KWU5   X1WJY4   A0A0J7KMG5   J9JWJ3   J9LJ80   A0A2S2NQQ6   A0A2H8TIE5   T1DCM0   A0A0J7NJI3   A0A2S2P7D1   X1WZ64   J9KJG8   J9KM84   A0A142LX45   J9KNS1   D6WC19   X1WXT5   A0A2M4BBV9   A0A2H8TR36   A0A2M4BDI3   A0A2M4BC01   J9KNN8   T1DG89   A0A2M4CS98   A0A2S2PRL8   A0A2S2NJ82   F7IYV5   T1DG59   A0A034WR48   F7IYV7   A0A2M4BC28   Q868S4   A0A023EW96   W8ANK7   W8ADE4   J9JY94   J9KUM6   J9LM37   A0A1W7R6I9   A0A0K8VPH1   F7IYU8   A0A2M4ADW9   A0A139W9J0   A0A139WAH4  

PDB

1WDU     E-value=5.71595e-09,     Score=150

KEGG

101737183    no KO assigned | (RefSeq) uncharacterized LOC101737183

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0004803   GO:0006313   GO:0003677   GO:0050909   GO:0016791   GO:0006470   GO:0008138   GO:0005524   GO:0016787   GO:0004713   GO:0016491   GO:0015930  

Length:

1123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.967649999999997

Exp number, first 60 AAs:

0.814

Total prob of N-in:

0.03644

outside

1  -  1123

 

 

Pi

123.107729

Theta

2.609199

Tajima's D

0

CLR

0.490215

CSRT

0.403229838508075

Interpretation

Uncertain