Pre Gene Modal
BGIBMGA011572
Annotation
PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.001
Sequence
CDS
ATGTGCGGGATAACGGGGTCGTTATCAGCAACTGCAACCAGAGTGAAGCTGTATAATATTTCAAAATTACTTGGATTCTGGAACTATTTTCCACACTGTCCTGAAAATTGTGTCAGTGAAAGTGATGTCGTCAATGTTAGTGAGGAAACCAAGTGTGTAAAAAAACAAGAGGAAGTGAGCAAATCGGAGGTGTGCGCTAAAAGTGACAGTGAAGTGAAGAGTGCAGTGAGTTGTGGTGTGGGCGCGGATGGTGTTGCCAGCGCCGTGGCCTCCGAGGAGGACGACTGTGTGATAGTGTGCGCTCGCGATGCAGACGATCGGTCCGACTCAGGAGTGAGTGGTGTCCGGTCAGGCGGCTCCGCCAGCTCCGTGGAGGAGCGGGAGTGGCGAGGTATGGCGCACGGGTACGGCGGAGGACCGCCGCCGCCCTTGCTGCATCTACCCGCTCCGCCGCCCCCCTCGCTCTACGCGCCTGAGCTGCTCTGGAAGCAGCGCTACCAAACCCCGTTACATCCGCCGCTTCATCATGCCATCACCGATGAATACCTTGCGTATGACAGAGAGAGACATGAAAGACTGCTACGAGAACGAAGGGAACAAGAGCAACAGATGCTGGAGAAACAGCAGAAAGAGAGAAAAGAGAGAGAAAGAATAGAACAGGAGAGAGAAAGAGAACGAGAGAGAGAGAAACAAGAAAGAGAAGATAAAGAAAGAAGGGAACAAGAAAATGCTGCCTCTAAACTTGTTTCGAGGCATTTTGAAGAATCTCTGAGACTAGCCAATCAAAAGAGGGGAGAGCGGAATAATTTAACATGGTCGATAATGCACAGCTTGACACCAAACCGCGCTGCTCCAGCGCCAGAACACGATAGGTTACGGGTACCTACGTCGGAACGCAATTATTATTCTCCTCCGGGACATCCACCTACGCATCCCACCCATCCTCAACATACATCCACACGGCCACCCGTTTCATCCCCAGGAGACTACTGCTCCCCACATGCTCGTCTTGTATCTTCCAAGGCTCAAGATAAGAATTCGTCACATCCAGGCTTACCCAAAGGAGAGCCAAATTTCGCACCTTATAATTATCCTCCATACAGAGCCTACGAAAAAATAAAAGATCCACATTTGCCGGCTCCACCGCCACTAGTTTCAGAGAAAAACACGGTTATAGTAAAACACGATGCAAAACAAATTCATCTCGAGCAAAATCATCAGTATCCGAGTAAGCCTCGAAATGATCCTTCCCCCCATTACCTTCCTTCTCGAACATATCGGACGGGGCCTTCGCCTCATGCACCTCCACACCAAACCTTACAACCGGCTCCGCATACTGCTGCTTTACCTGCACAGGATAAAAGTGGTCGACGGCTGTATCAGCCGCAACCGAAGCCCCAGCTGCAACGGTCACCGGCCTACTACGCAGCTGCTCCTCCAGTAAAACCGAAGGTTTCGAGTCCTGCACCTCCACATATTTACGGAAAACCTAGTAATTCTCAAGTATCCACGCATTATGCCGTCGCTGTTGAACCACCACCTCCACCGATTGCAAAAGCGGAACCTCCGCCTGTACCATATCCGCCACCATCTACGTTCTCGCCGGTGCCTAGAACGTGGCCTCCTCCACCGGCACATTCGCGAACGCCTGAACCTCGTCCAACACCACGGCATGTCGTTGATTCAACCTCGACGTCACCGTGCCAAACGCAACCTTTAGATTTGGGTGTGCCTAGAGATGATTCCGACCGATTATCCCCTAGAAGAAGAGCAGCACTCGGTTCGCCATCGCCGTCGGAATCTGATGCGAAACGACGCCGTCTTGAAGAATCAACAGCACCTCAACCCCTTATAGCTGCAGCAGCAAGTGTAGCACGCGCTTCCGCTGGGTCTGAACCAGCACCGCTGGCGCCAGGACCACCATGCGACGTGCGTGTACCATCTGCAGATGGAAGTATCGAAACACCAGAACGCGCAGCGGGTGCTTCACCGGCCCCAAGACATGCGCTCGCCGCGAGTCCGGCTCCAGCGACACCTGTATCTCCCCTAGTCGCGTCTCCTCTACAGGCTGCGGCACCGCCACCTGCACCGACACCTCCTGCACCACCGGCGACACCTCCAGTCTCTGTAAGTGGCGACGCTGATACACCTGCGAAAGCTGCGTCATCTCCACGTGATGGCTCAGCTCCAGTGCGGCATCTTGGAAAAAAAGCATGGCTTCAGAGACACGAAACCGCACCAATAGGTGAGGGAGATTGTTCGGGAGGAGGAGGTACTTGTATAACACTTCCAATGACGATCACGCGAAATTCAGAGCAGGATGATTCTGGGTCGAACGTTACCGTTCCAGTCGCGGCGAAATCCATCCAACGGTCCGTCCGAAAAACTTCCAAACCACGAAAAACAAAGGAGCCCAACGGTCGAGTAGATGATGTAGAAGAGGACAGTTCCAGCTCTGATCGCGAATCCTCGGCCCCCCCTAAACGCAAACCTCCAAAGGCAAAACGGAAAAAGAGCAGCGTCGCCCGCAAGATCGGGGATGAACCGAAACGAAAGAAGGCCGCTGCCGAAAGTGGAAGCGAAAGTGACAAAGAGAGCGATGATAAAGATACAGATTCGGGTGGCAGCGGAAGTGGCAGCGGGAGCACGTCGAGTAGACGCGGTGCTGGTCGAGCGCGCGGTCGCAGGTCCCGGGGCGGCGGCCGGGGCGGACGGCGCCGTGAGGAACCGCCTCGCCGCAACGTTGGCAACACGCCCGTCAAACCCCCACAGGACTCTTTTCTGCAGAGCGGACCGTGTTTCGAGGTTGCTCCGCGTCTCGCCAAGTGTCGCGAGTGTCGCTGGTCACCCGCACAGCGAGATAAAGATATGCCGAATATCTTCTGCCGTTTCTACGCTTTCCGAAGACTGAAATACGCTAAAAACAGACAGTTGGCTATAGCCGGCTTCTCAGATCCTTACAAGGACGCCGAAGAGGAAGATAAGAAGTTATGGTTGTCGTCATCAGCCGGTGCCGCCGAATTAGACATTGAGATGAGTTGCTTCCTTTTGAGGGAGATTGGAGACCAGTTCTGTGAACTGCTACAACAAGAGAAAGAAGCGGAATCGCACCATTTGAATACTGATAAGACAGTAGCATGGAAACGTGTTGTACAAGGAGTTCGTGAGATGTGTGATGTTTGTGAGACCACACTTTTTAACTTTCACTGGACTTGCGGGAAGTGCGGCTTTGTTGTCTGCCTAGACTGCTATAAGACAAGAACCACAACTGAAGCTACCACAAATTCGAGTAGTGAGACAAGTAGTACAAGCAATGTCACCACTAACGGAGAAAGAGATTCCTTTGGCTGGTTGACGTGTACAATGGGCGGCCCGCACCCCGCGCGGCGGCTGCTCCTCACGCAGATCGCGGCGGGCGGCGCGCTGGGGGCGGCGGCGACGCGCGTGCACACCCTGCGCTCTGTGTTCGGTCTGCCCGCGTGCTCGTGCGGACACGCGCCCGCGCCCTCGCCGCAACGCCGACAGCAAGCCAAGAACCTGCTGCAGATCGCGCTCAATAAGAATGTGAAAAAGGAAGATGTCAAGGAAGAAAGTACTCCTACTAACGGTTCGTCTCCCGTGAAATCTGAAAATGTAAAGACTGGCAGCTCCATCGTTAGCTGGCTGTCGGATTTGCCCATAAAGTCTGAGAGTAAAGATGAAAAGTCCGATTCTAGTACCTCGGATTCGGATGAAGGTGGAAATTATTCGACGTTGCGAGAGTTACTGATCAGGCCGGCTCCGGAAGGCGGAGAGGTTCAACCGAAGAAGAAACAGAAGAAGAACAAGAGTGACGCACTCGAGGACGTCATCTCCAGCATCGTCGACGAGAAGAAAGACGAAGACGAAGATGAGAAACCGTTCGTTCTCTCGAATGTGGTTAAACGTTACGACAGGAGCGGACGCAGCCGCGAGGAGCTGCCCGTCAGAATTATGACCCTGACGGAATCGAAGCTTCTCTACCCTGATGTCCCGCATGCCTGGCTCTGTGACGGCAAGCTGTTACACCTCACGGATGCGGTGCACGCCGGCAACTATAAACCTTTCCAGGACCAGTGGAAACGTGGTCAACCAGTTCTAGTCTCTGATGTATCTGCTCTGCTCGATAAGGATTTGTGGTCCCCCGAAAGTTTCTCACGCGATTTCGGTGACACCCGCGTGGATCTAGTGAACTGCGCGTCCGGTCTAGTCGTACCCAACCAGCCCGCAAGGAAGTTCTGGGATGGATTCGATCTCGCCGTCAAGCGGCTGCGAGACGAACGCGGCGCTCCCATGGTGCTCAAGCTCAAGGACTGGCCTCCGGGCGAAGACTTCGCCGAGCTGCTTCCGGCGCGCTTCGACGACCTCATGCGAGCTCTCCCTCTCTCCGAGTACACCTCGCGCAACGGGAAACTGAACCTGGCCGCGCGCCTGCCCGAGTGCTTCGTGCGACCCGACCTCGGACCCAAGATGTACACGGCGTACGGCGGCGCCGGCGGGACCACCAACCTGCACCTCGACGTCAGCGACGCCGTCAACGTGATGGTGCACGCCAGCGCGCCCGCAGACGCGCCCGAGCGAGCGCGGGAGGCGGCGCGCGCGGCCGAGGAGGCCGGCGTGGACGTGCTGTCCCGGCGCCGCGCCCGCCTCAAGCCGCCCGCCGCGCTCTGGCACATCTACGCCGCCAAGGACGCCGACAAGATCCGCGACTTCCTCGTGCGGGCCGAGCTCGACCGCGGCGCCCGCCCGCGCCCACAGCACGACCCCGTCCACGACCAGACCTGGTACCTGGACGCGGCGCTGCGCGAGCGGCTGTACCGCGAGTACGGCGTGGAGGGGTACGCCATCCTGCAGTGTCCGGGGGACGCCGTGTTCGTGCCGGCGGGGGCGCCGCATCAGGTGCGTAACCTGCTGGACTGCATCAAGGTGGCGGAGGACTTCGTGTCGCCCGAGAACGTGTCGCGGTGCTTCGAGCTCGCGCAGCAGTTCCGGCAGCTGTCGCGGCAGCACTCCAACAAGGAGGACAAGCTGCAGATCAAGAACATCGTGTACCACGCGGTGAAGGACTCCCTGTGCTGCCTCGAGGAGGCTCTCGCGAAGGCCGAGTGA
Protein
MCGITGSLSATATRVKLYNISKLLGFWNYFPHCPENCVSESDVVNVSEETKCVKKQEEVSKSEVCAKSDSEVKSAVSCGVGADGVASAVASEEDDCVIVCARDADDRSDSGVSGVRSGGSASSVEEREWRGMAHGYGGGPPPPLLHLPAPPPPSLYAPELLWKQRYQTPLHPPLHHAITDEYLAYDRERHERLLRERREQEQQMLEKQQKERKERERIEQEREREREREKQEREDKERREQENAASKLVSRHFEESLRLANQKRGERNNLTWSIMHSLTPNRAAPAPEHDRLRVPTSERNYYSPPGHPPTHPTHPQHTSTRPPVSSPGDYCSPHARLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQLQRSPAYYAAAPPVKPKVSSPAPPHIYGKPSNSQVSTHYAVAVEPPPPPIAKAEPPPVPYPPPSTFSPVPRTWPPPPAHSRTPEPRPTPRHVVDSTSTSPCQTQPLDLGVPRDDSDRLSPRRRAALGSPSPSESDAKRRRLEESTAPQPLIAAAASVARASAGSEPAPLAPGPPCDVRVPSADGSIETPERAAGASPAPRHALAASPAPATPVSPLVASPLQAAAPPPAPTPPAPPATPPVSVSGDADTPAKAASSPRDGSAPVRHLGKKAWLQRHETAPIGEGDCSGGGGTCITLPMTITRNSEQDDSGSNVTVPVAAKSIQRSVRKTSKPRKTKEPNGRVDDVEEDSSSSDRESSAPPKRKPPKAKRKKSSVARKIGDEPKRKKAAAESGSESDKESDDKDTDSGGSGSGSGSTSSRRGAGRARGRRSRGGGRGGRRREEPPRRNVGNTPVKPPQDSFLQSGPCFEVAPRLAKCRECRWSPAQRDKDMPNIFCRFYAFRRLKYAKNRQLAIAGFSDPYKDAEEEDKKLWLSSSAGAAELDIEMSCFLLREIGDQFCELLQQEKEAESHHLNTDKTVAWKRVVQGVREMCDVCETTLFNFHWTCGKCGFVVCLDCYKTRTTTEATTNSSSETSSTSNVTTNGERDSFGWLTCTMGGPHPARRLLLTQIAAGGALGAAATRVHTLRSVFGLPACSCGHAPAPSPQRRQQAKNLLQIALNKNVKKEDVKEESTPTNGSSPVKSENVKTGSSIVSWLSDLPIKSESKDEKSDSSTSDSDEGGNYSTLRELLIRPAPEGGEVQPKKKQKKNKSDALEDVISSIVDEKKDEDEDEKPFVLSNVVKRYDRSGRSREELPVRIMTLTESKLLYPDVPHAWLCDGKLLHLTDAVHAGNYKPFQDQWKRGQPVLVSDVSALLDKDLWSPESFSRDFGDTRVDLVNCASGLVVPNQPARKFWDGFDLAVKRLRDERGAPMVLKLKDWPPGEDFAELLPARFDDLMRALPLSEYTSRNGKLNLAARLPECFVRPDLGPKMYTAYGGAGGTTNLHLDVSDAVNVMVHASAPADAPERAREAARAAEEAGVDVLSRRRARLKPPAALWHIYAAKDADKIRDFLVRAELDRGARPRPQHDPVHDQTWYLDAALRERLYREYGVEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRCFELAQQFRQLSRQHSNKEDKLQIKNIVYHAVKDSLCCLEEALAKAE
Summary
Uniprot
ProteinModelPortal
PDB
4C8D
E-value=1.26086e-101,
Score=950
Ontologies
GO
Topology
Length:
1708
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00179
Exp number, first 60 AAs:
0.00115
Total prob of N-in:
0.00006
outside
1 - 1708
Population Genetic Test Statistics
Pi
279.67551
Theta
211.006851
Tajima's D
1.086448
CLR
0.037542
CSRT
0.689665516724164
Interpretation
Uncertain
