Gene

KWMTBOMO13846  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA011568

Annotation

Testis-expressed_sequence_10_protein-like_protein_[Operophtera_brumata]

Location

Bomo_Chr23(+):11023750-11027045      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.641

CDS

ATGCCACAAACGGGTGCAACTCGTTACCAAAAATTTCTTAAGTCTGAAAAGGCAAAGACTAAACTGAAAGCCAAAAAGGATCTTCCTAAAGGAACAAATGTTACTAAAACAAATTTTAAAGTGAAGAAAATTGTCATTAAAGAGCAGCTTAGAAAACGTACTGAGAAAGAGGCGTTGTCTATACGAAAGCTGAATGTTAAAGAACTCATAACACGTCTAAATCATTTTAACACAAATACCCGGAAAGACGCTCTCGATGGACTCACGGAACTAATTTCAGCTCATCCGGAAATTTTAGAAAAAGATTTAGGACTAATTATTCATGGAGTTAGTCCAATGATTTTGAATGTTGAAAAAATCGTGCGCCATGAATCACTGAAAGTTTTACACTTGATACTTTCGAATTTGAGTGTTGAGAAGATAGATCCATTTTTTGATGTTATGTCTACGTTTCTAAGGAGTGCTATGACTCATATTAACAGTAGAATTCAAGAAGATTCTCTACTATTCTTAGATATTCTCCTTCTATGTGCCCCAATGAAAATGGCAAAAGATTTTTATAGAATTATTCCAAATTTTTTAGACATGATATCAAAATTACACATTGACTCAAAACCTGGACGAACACTTACAGTTAATATGGAAAGCCAAATTACAAGTGTTCGTTGGAGATCTAAAGTTCTTCATAGACTTCAAGATTATTTACAGAAATTTGTCATACACAACAAAGTTCTTGAATTTGAGAAACCTATAACAGAGTGTACAGAAGTTTTTGACCAAACTAAGCTAAAGTATTATCCATTATTTAAGCCAACTTACACATCAGTATGCTATTTGAAAATGCTATCATCCAAAAATTCTCAAGAGATTGTATCTGTTGATGAAGTGGAACAATTGAAAGGCTATATAGACAACTTGATGCCACTATTATTTGAAATATGGCTTGAAGTGTGCCCAAATATGAACAAGGAAAAAAACATTGAGACTGTTGTAAGTGAAGATGCTGCATCATTATTAAAACATTCTCTTGAGATTATATTTTTGTTATGGGACCTAATAGAACATCTCAACAAGAAGAATCCGAGTTCAGATATAGAATCATCTTTTTGCCAGAAATATAAAAACTTATATACATTACACTTTGTGAATGCTTTTCCTTATGTGACAAATGTTAGAACCAAACAAAATAGTGATACTTCCCTTGAGAATGTGATTACGGACTCAAAATTGGTTTTAGAAAATTTGAAAATATGCCACTTGTTCATATTATTAAATCCAAAGATAAATTTGAAGTTACAAAACAAAGACATTGTTGCTATCTTGCATTATATAGAAAAAACTTTCAACCATAATACTAAAGATGAAGTAAACGATGCCATCATTGAAATCATGCACACCATATTTTCAACTGAAGTGAGTAACTGGAGTAAAACATGTAGTGTAATGGATGGCTTATTCCGGAAAATTATATGTGCCTACTTCAATAAAAATATGTCCGGATCGTGGAAACAAAAAATATTCGGGGTCCTATGCAAAGTTGCTCTTAATGATAAACTAAGTCATTTTCATGCCATTGATGCATATGAAATGTGGCTCAAGAATCTACCAGACATTTTATTGGGTAGTTCAGTTACAGAACAAACCATAGATATTATTCATAAATTTGCTGTACAGAGCAATGACAAATTTAATATAGTCATCAAACCTAAGTTGTCAATGATTATAGAAAATCTGCCAAATATTGTTAGTTCAGAAGCTGCTAATAATCCAAACATGTATTATAAATTATTTTCATTATTTTTTTGGATACGACCTTGGGATAATGAATCCTTAAATGTTTTAGAAAAACAATTATTGGACAGCAAATATAGTGATGATCATTGTAAATATATTATTGATACGTTAAAAAGTAGAACTGGAAGCACCTAA

Protein

MPQTGATRYQKFLKSEKAKTKLKAKKDLPKGTNVTKTNFKVKKIVIKEQLRKRTEKEALSIRKLNVKELITRLNHFNTNTRKDALDGLTELISAHPEILEKDLGLIIHGVSPMILNVEKIVRHESLKVLHLILSNLSVEKIDPFFDVMSTFLRSAMTHINSRIQEDSLLFLDILLLCAPMKMAKDFYRIIPNFLDMISKLHIDSKPGRTLTVNMESQITSVRWRSKVLHRLQDYLQKFVIHNKVLEFEKPITECTEVFDQTKLKYYPLFKPTYTSVCYLKMLSSKNSQEIVSVDEVEQLKGYIDNLMPLLFEIWLEVCPNMNKEKNIETVVSEDAASLLKHSLEIIFLLWDLIEHLNKKNPSSDIESSFCQKYKNLYTLHFVNAFPYVTNVRTKQNSDTSLENVITDSKLVLENLKICHLFILLNPKINLKLQNKDIVAILHYIEKTFNHNTKDEVNDAIIEIMHTIFSTEVSNWSKTCSVMDGLFRKIICAYFNKNMSGSWKQKIFGVLCKVALNDKLSHFHAIDAYEMWLKNLPDILLGSSVTEQTIDIIHKFAVQSNDKFNIVIKPKLSMIIENLPNIVSSEAANNPNMYYKLFSLFFWIRPWDNESLNVLEKQLLDSKYSDDHCKYIIDTLKSRTGST

Uniprot

H9JPW3   A0A2H1V7T9   A0A0L7LHL2   A0A2A4IXU1   A0A1E1WRU8   A0A194QTA1   + More
A0A212EH72   A0A194PSQ7   K7IWV6   A0A2J7RRZ2   A0A232FCM9   A0A182JFZ7   A0A1Y1NA26   A0A088AR13   Q17MP9   A0A182G568   A0A1Q3EWC5   A0A1I8NIA4   A0A2J7RRZ4   A0A0L0C4I3   Q5TSF1   A0A182S5U2   U5ENT9   A0A182S4X7   A0A2A3EAF6   A0A084VKW5   A0A182LQ17   A0A182YA36   A0A182HFR1   A0A182MC05   A0A182JRK6   A0A182UR51   A0A182VTC1   A0A0V0G6P4   A0A1A9UUW6   E2A6T9   A0A182X1U7   A0A0A1WDU1   A0A023EXT6   A0A182P8H0   A0A1B0FCU1   A0A1A9XYF2   A0A034VSP7   A0A182R137   A0A195FLP2   A0A1A9XYE9   A0A1B0ASW0   A0A336MCB0   F4W5R0   A0A1I8PX04   A0A0K8VNE7   A0A1A9WZE0   A0A0C9RY26   A0A151I0Q5   A0A158P2Q7   W8AX17   A0A1B6D5G6   N6TVW5   T1I686   A0A146M6D5   A0A146LN70   A0A1B6KGZ3   A0A1B6L904   D2A610   B4Q0M8   A0A1W4VWK5   B4R6A8   B4L8I3   A0A1B6JIM9   A0A0C9QEE7   A0A0M5J5Y3   B4IKW6   C3Z8G3   Q9W3K4   Q29HE4   B4GXV1   E9J5D5   B3MRK3   B3NWJ9   A0A3B0K3U1   B4M1Y6   B4NPM9   A0A2U9AYK4   A0A2H8TGP5   A0A3Q3E887   J9JZN0   A0A091NU67   A0A3Q2ZTR3  

Pubmed

19121390    26227816    26354079    22118469    20075255    28648823    + More
28004739    17510324    26483478    25315136    26108605    12364791    24438588    20966253    25244985    20798317    25830018    25474469    25348373    21719571    21347285    24495485    23537049    26823975    18362917    19820115    17994087    17550304    18563158    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    21282665   

EMBL

BABH01015440    ODYU01001116    SOQ36881.1    JTDY01001078    KOB74942.1    NWSH01004849    + More
PCG64655.1    GDQN01001352    JAT89702.1    KQ461195    KPJ06771.1    AGBW02014956    OWR40820.1    KQ459600    KPI94160.1    AAZX01010983    NEVH01000596    PNF43611.1    NNAY01000459    OXU28243.1    GEZM01009708    JAV94368.1    CH477204    EAT47973.1    JXUM01145173    JXUM01145174    JXUM01145175    JXUM01145176    JXUM01145177    KQ569935    KXJ68480.1    GFDL01015440    JAV19605.1    PNF43613.1    JRES01000994    KNC26354.1    AAAB01008933    EAL40354.3    GANO01003941    JAB55930.1    KZ288308    PBC28743.1    ATLV01014310    KE524956    KFB38609.1    APCN01005566    AXCM01002293    GECL01002517    JAP03607.1    GL437203    EFN70805.1    GBXI01017471    JAC96820.1    GBBI01004622    JAC14090.1    CCAG010007386    GAKP01013463    JAC45489.1    AXCN02001048    KQ981512    KYN40909.1    JXJN01003016    UFQS01000641    UFQT01000641    SSX05668.1    SSX26027.1    GL887695    EGI70386.1    GDHF01011908    JAI40406.1    GBYB01012800    GBYB01012801    JAG82567.1    JAG82568.1    KQ976609    KYM79316.1    ADTU01007382    GAMC01013090    JAB93465.1    GEDC01031005    GEDC01016367    JAS06293.1    JAS20931.1    APGK01052898    KB741216    ENN72526.1    ACPB03014449    GDHC01004313    JAQ14316.1    GDHC01010397    JAQ08232.1    GEBQ01029271    JAT10706.1    GEBQ01019784    JAT20193.1    KQ971346    EFA04998.2    CM000162    EDX02299.2    CM000366    EDX17385.1    CH933815    EDW07958.1    GECU01020525    GECU01017978    GECU01008658    JAS87181.1    JAS89728.1    JAS99048.1    GBYB01012803    JAG82570.1    CP012528    ALC48656.1    CH480859    EDW52737.1    GG666594    EEN51068.1    AE014298    AY061490    AAF46322.1    AAL29038.1    AHN59474.1    CH379064    EAL31814.1    CH479196    EDW27578.1    GL768143    EFZ11969.1    CH902622    EDV34408.1    CH954180    EDV46819.1    OUUW01000016    SPP88897.1    CH940651    EDW65690.2    CH964291    EDW86469.1    CP026243    AWO96641.1    GFXV01001405    MBW13210.1    ABLF02035128    ABLF02035132    KL393535    KFP92484.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000002358    UP000235965    UP000215335    UP000075880    UP000005203    UP000008820    UP000069940    UP000249989    UP000095301    UP000037069    UP000007062    UP000075901    UP000075900    UP000242457    UP000030765    UP000075882    UP000076408    UP000075840    UP000075883    UP000075881    UP000075903    UP000075920    UP000078200    UP000000311    UP000076407    UP000075885    UP000092444    UP000092443    UP000075886    UP000078541    UP000092460    UP000007755    UP000095300    UP000091820    UP000078540    UP000005205    UP000019118    UP000015103    UP000007266    UP000002282    UP000192221    UP000000304    UP000009192    UP000092553    UP000001292    UP000001554    UP000000803    UP000001819    UP000008744    UP000007801    UP000008711    UP000268350    UP000008792    UP000007798    UP000246464    UP000261660    UP000007819    UP000264800   

PRIDE

H9JPW3    Q9W3K4   

Pfam

PF12333   Ipi1_N        + More
PF00400   WD40

Interpro

IPR016024   ARM-type_fold        + More
IPR037947   TEX10/Ipi1       
IPR024679   Ipi1_N       
IPR011989   ARM-like       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR019775   WD40_repeat_CS       
IPR037850   RBBP5/Swd1       
IPR021133   HEAT_type_2       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10     2.130.10.10    

ProteinModelPortal

H9JPW3   A0A2H1V7T9   A0A0L7LHL2   A0A2A4IXU1   A0A1E1WRU8   A0A194QTA1   + More
A0A212EH72   A0A194PSQ7   K7IWV6   A0A2J7RRZ2   A0A232FCM9   A0A182JFZ7   A0A1Y1NA26   A0A088AR13   Q17MP9   A0A182G568   A0A1Q3EWC5   A0A1I8NIA4   A0A2J7RRZ4   A0A0L0C4I3   Q5TSF1   A0A182S5U2   U5ENT9   A0A182S4X7   A0A2A3EAF6   A0A084VKW5   A0A182LQ17   A0A182YA36   A0A182HFR1   A0A182MC05   A0A182JRK6   A0A182UR51   A0A182VTC1   A0A0V0G6P4   A0A1A9UUW6   E2A6T9   A0A182X1U7   A0A0A1WDU1   A0A023EXT6   A0A182P8H0   A0A1B0FCU1   A0A1A9XYF2   A0A034VSP7   A0A182R137   A0A195FLP2   A0A1A9XYE9   A0A1B0ASW0   A0A336MCB0   F4W5R0   A0A1I8PX04   A0A0K8VNE7   A0A1A9WZE0   A0A0C9RY26   A0A151I0Q5   A0A158P2Q7   W8AX17   A0A1B6D5G6   N6TVW5   T1I686   A0A146M6D5   A0A146LN70   A0A1B6KGZ3   A0A1B6L904   D2A610   B4Q0M8   A0A1W4VWK5   B4R6A8   B4L8I3   A0A1B6JIM9   A0A0C9QEE7   A0A0M5J5Y3   B4IKW6   C3Z8G3   Q9W3K4   Q29HE4   B4GXV1   E9J5D5   B3MRK3   B3NWJ9   A0A3B0K3U1   B4M1Y6   B4NPM9   A0A2U9AYK4   A0A2H8TGP5   A0A3Q3E887   J9JZN0   A0A091NU67   A0A3Q2ZTR3  

KEGG

101737127    K14827 pre-rRNA-processing protein IPI1 | (RefSeq) testis-expressed sequence 10 protein

GO

GO:0097344   GO:0071339   GO:0048188   GO:0016021   GO:0005488   GO:0016311   GO:0016791   GO:0006470   GO:0008138   GO:0005524   GO:0016787   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR16056:SF2   PTHR44040  

Length:

642

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0460700000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00348

outside

1  -  642

 

 

Pi

233.711955

Theta

193.894415

Tajima's D

0.764433

CLR

0.073919

CSRT

0.594120293985301

Interpretation

Uncertain