SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO13845
Pre Gene Modal
BGIBMGA011567
Annotation
PREDICTED:_uncharacterized_protein_LOC107067961_isoform_X2_[Polistes_dominula]
Transcription factor
Location in the cell
Nuclear   Reliability : 3.245
 

Sequence

CDS
ATGCCTTTGTCTTTTTTTCAACCAACGACACCAACAAGGTTAATAAATTGGACAAAGTCAATGGGCATTAATTTAAAAGCAACAGACTCTATTTGTCAATTTCATTTTAAAGAGGAGCATATAAAAATGTATGATAAAATTAAAATTGGTGAAGTTATTTATTTCTCGTATTTACTAAAGAAAGTACTAAAGGAAGAAGCTTTGCCAACAATTGAGCATCAATTTCATCCTTTACTAGACCAACAGCAAAGTATCCTCAAGGTACAGGAACTACTAATAGATCCGCAGAACAGTTGCTATTCTACAGATTACATAGAACAAAGTCAAGAAAGTTTCCAAGAACAACTTCAGATCGAGAAAACGCATAATGATTCAAGGGAACAAGAACTGATTGAATCTATTGATTATTTCAAAAATAATGTTAGCAACTTTTTAATACTGCCAGAGTTTTGGTTTTACATAGAAAAACCTAGACAATTAGAGTTTATGAGAATTGATCGTGCATGCAAGCAAATAAAAAATCATATACGTTTAAATGAAGACTTATCAATAACGGTAATTCTTTTAAATAATGAAGAATTATGTACAGATCTAAAAATTTGTTCATTTGAAAATATTTACGATTACTTAAAATCTGTTGAAAAGTGGCCCCTGTGTGTTGGTACCCAAATCGAGAGAAACAAATATTCAAAAAAATGCAGAGGTGTCATCATTGGTGATGAAGCCTATAAAAGATTTCAAAGAAATCCAAGATGCAAGTCTTGTCGGATCCTAAGGAATCAGTTGAAAAAACGTAAACTTTTAGCAGCTGCAAAGGTGTGGGAAAATGAAACAAAATCAATGTGTGGATATGGTGCACAAATGGATGTAGCTTCTTGA
Protein
MPLSFFQPTTPTRLINWTKSMGINLKATDSICQFHFKEEHIKMYDKIKIGEVIYFSYLLKKVLKEEALPTIEHQFHPLLDQQQSILKVQELLIDPQNSCYSTDYIEQSQESFQEQLQIEKTHNDSREQELIESIDYFKNNVSNFLILPEFWFYIEKPRQLEFMRIDRACKQIKNHIRLNEDLSITVILLNNEELCTDLKICSFENIYDYLKSVEKWPLCVGTQIERNKYSKKCRGVIIGDEAYKRFQRNPRCKSCRILRNQLKKRKLLAAAKVWENETKSMCGYGAQMDVAS

Summary

Pfam
PF05485   THAP        + More
PF12017   Tnp_P_element
Interpro
IPR006612   THAP_Znf        + More
IPR038441   THAP_Znf_sf       
IPR021896   Transposase_37       
Gene 3D

Ontologies

Topology

Length:
292
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00485
outside
1  -  292
 
 

Population Genetic Test Statistics

Pi
256.130811
Theta
192.622095
Tajima's D
1.263425
CLR
0
CSRT
0.734513274336283
Interpretation
Uncertain
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