Gene
KWMTBOMO13843
Pre Gene Modal
BGIBMGA011566
Annotation
PREDICTED:_protein_DPCD_isoform_X1_[Amyelois_transitella]
Full name
Protein DPCD
Location in the cell
Nuclear Reliability : 2.779
Sequence
CDS
ATGTACAAAAACACCATTTGGTATCATACTTTACTAGATGCTGAAAAATCATGTCTCAAGGAAGAAAAAGTTAAAAAAATTCATTATAAGTTCGAAGACGGTAGAGAAATGGTAGAGGAATATAATGTAGATACACAAGTTTTATTACGTAGAGCTTGGAAGGTGAAAGGAAAACTTGGTGGTGAAGGAAAATGGCATGTAGAAATTGGTGATCCCATACCTGATGCTATTTCAAATAGTGATTGTGCTGAAATAACTGAATGCAAAGACCAGCCTCAAGTATTCAGGAGGAATACGAGAATAAATTTAGAATGGAGAATAAGAAATCTACCATACCCAATTGAAACATATTCTATTAGTGCAAACAATGATGAAAGGTGCATAGTTATTAGAACAACAAACAAAAAATACTTTAAAAAGTTTAAAATACCTGAACTTGAGAGGCTGAACTTAAATATAGAGCAAGCTAATATACAATCTTCTCATCATTTCAACACATTAATAATTATGTACAAGAAACCTCAACAACTACTCGACATGGAGAAGGAATGGTATGAAGAATTAAAGAAGGTAAAACCAATCAAGGACATACCTAATGATTGTAAAACCCAATAA
Protein
MYKNTIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGKWHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLIIMYKKPQQLLDMEKEWYEELKKVKPIKDIPNDCKTQ
Summary
Description
May play a role in the formation or function of ciliated cells.
Similarity
Belongs to the DPCD family.
Keywords
Alternative splicing
Complete proteome
Reference proteome
Polymorphism
Feature
chain Protein DPCD
splice variant In isoform 2.
sequence variant In dbSNP:rs1331419018.
splice variant In isoform 2.
sequence variant In dbSNP:rs1331419018.
Uniprot
H9JPW1
A0A2H1V7T8
A0A1E1W0S9
A0A1E1W2Z5
A0A1E1WIJ8
A0A2A4IZW6
+ More
I4DJW8 A0A3S2P0Y5 A0A194PLF8 A0A212EH69 A0A0L7LH97 A0A0N1PEN7 A0A194QN35 D6WBE5 A0A1Y1MBW2 A0A1B6KUG0 R4WDV6 A0A0T6BB27 A0A067RHD8 A0A224XYJ7 A0A0V0GAJ1 K7IML9 A0A069DQJ5 A0A0A0A2Y2 G1NCK4 A0A3M0KJS4 A0A1W4WHB9 A0A232FHB3 A0A091HQW3 A0A0P4VT47 R4FN24 H0ZI66 A0A0A9ZCI3 C3Y3N6 A0A218V8T1 A0A3L8SHJ9 A0A0C9QFB2 A0A2J7PCT4 W5LHP7 A0A0Q3PMM9 A0A087QZA2 A0A1V4KIT1 A0A091UMP9 Q8BPA8 G3T3T2 H2ZYN3 Q9BVM2 A0A2D4PRF7 A0A154PHX2 A0A091Q4H8 A0A226P7V0 F1S8U0 A0A212CN44 A0A384AJH2 A0A093IK65 Q6AYM4 A0A093H9E1 A0A093S0D4 A0A2K6FEL8 A0A2U3W211 A0A091ED41 W5Q581 A0A2R9BL51 H2Q2G3 G1RXX7 A0A091SNG9 A0A091M1W8 E1C3U1 A0A093LC36 G3QQQ9 A0A091KUL1 A0A3N0YV08 A0A091JUS5 A0A091GT07 A0A3Q7VC29 A0A2A3EJG9 A0A087ZU18 A0A2Y9HWB9 U4TZY5 F7HH78 A0A341ANU5 J3JUA8 A0A2Y9F2H6 A0A091TPG0 A0A2Y9N654 G3I578 A0A093CJL3 A0A091G239 A0A2Y9RNM8 L8IZW8 Q24K21 A0A0B8RPB4 G5CAF8 A0A1B6CBF2 G1T9A6 A0A340YBH6 A0A2I2V3U0 A0A1U7Q5T2 A0A2K5RER0
I4DJW8 A0A3S2P0Y5 A0A194PLF8 A0A212EH69 A0A0L7LH97 A0A0N1PEN7 A0A194QN35 D6WBE5 A0A1Y1MBW2 A0A1B6KUG0 R4WDV6 A0A0T6BB27 A0A067RHD8 A0A224XYJ7 A0A0V0GAJ1 K7IML9 A0A069DQJ5 A0A0A0A2Y2 G1NCK4 A0A3M0KJS4 A0A1W4WHB9 A0A232FHB3 A0A091HQW3 A0A0P4VT47 R4FN24 H0ZI66 A0A0A9ZCI3 C3Y3N6 A0A218V8T1 A0A3L8SHJ9 A0A0C9QFB2 A0A2J7PCT4 W5LHP7 A0A0Q3PMM9 A0A087QZA2 A0A1V4KIT1 A0A091UMP9 Q8BPA8 G3T3T2 H2ZYN3 Q9BVM2 A0A2D4PRF7 A0A154PHX2 A0A091Q4H8 A0A226P7V0 F1S8U0 A0A212CN44 A0A384AJH2 A0A093IK65 Q6AYM4 A0A093H9E1 A0A093S0D4 A0A2K6FEL8 A0A2U3W211 A0A091ED41 W5Q581 A0A2R9BL51 H2Q2G3 G1RXX7 A0A091SNG9 A0A091M1W8 E1C3U1 A0A093LC36 G3QQQ9 A0A091KUL1 A0A3N0YV08 A0A091JUS5 A0A091GT07 A0A3Q7VC29 A0A2A3EJG9 A0A087ZU18 A0A2Y9HWB9 U4TZY5 F7HH78 A0A341ANU5 J3JUA8 A0A2Y9F2H6 A0A091TPG0 A0A2Y9N654 G3I578 A0A093CJL3 A0A091G239 A0A2Y9RNM8 L8IZW8 Q24K21 A0A0B8RPB4 G5CAF8 A0A1B6CBF2 G1T9A6 A0A340YBH6 A0A2I2V3U0 A0A1U7Q5T2 A0A2K5RER0
Pubmed
19121390
22651552
26354079
22118469
26227816
18362917
+ More
19820115 28004739 23691247 24845553 20075255 26334808 20838655 28648823 27129103 20360741 25401762 26823975 18563158 30282656 25329095 16141072 15489334 21183079 9215903 14702039 15164054 14630615 17974005 21269460 24621616 30723633 15057822 20809919 22722832 16136131 15592404 22398555 23537049 25243066 22516182 21804562 29704459 22751099 25727380 21993625 21993624 17975172
19820115 28004739 23691247 24845553 20075255 26334808 20838655 28648823 27129103 20360741 25401762 26823975 18563158 30282656 25329095 16141072 15489334 21183079 9215903 14702039 15164054 14630615 17974005 21269460 24621616 30723633 15057822 20809919 22722832 16136131 15592404 22398555 23537049 25243066 22516182 21804562 29704459 22751099 25727380 21993625 21993624 17975172
EMBL
BABH01015437
BABH01015438
ODYU01001116
SOQ36879.1
GDQN01010515
JAT80539.1
+ More
GDQN01009706 JAT81348.1 GDQN01004328 JAT86726.1 NWSH01004849 PCG64653.1 AK401586 BAM18208.1 RSAL01000006 RVE54224.1 KQ459600 KPI94162.1 AGBW02014956 OWR40822.1 JTDY01001078 KOB74943.1 KQ458546 KPJ05830.1 KQ461195 KPJ06769.1 KQ971312 EEZ97894.1 GEZM01037460 JAV82060.1 GEBQ01024885 JAT15092.1 AK417889 BAN21104.1 LJIG01002386 LJIG01002385 KRT84554.1 KRT84555.1 KK852468 KDR23271.1 GFTR01003315 JAW13111.1 GECL01001142 JAP04982.1 GBGD01003022 JAC85867.1 KL870257 KGL87375.1 QRBI01000108 RMC11464.1 NNAY01000192 OXU30124.1 KL217736 KFO98286.1 GDKW01002464 JAI54131.1 GAHY01000733 JAA76777.1 ABQF01027082 GBHO01000617 GBRD01003625 GDHC01013963 GDHC01011343 JAG42987.1 JAG62196.1 JAQ04666.1 JAQ07286.1 GG666484 EEN64912.1 MUZQ01000028 OWK62369.1 QUSF01000019 RLW02187.1 GBYB01002089 JAG71856.1 NEVH01027057 PNF14127.1 LMAW01002767 KQK77324.1 KL226002 KFM06556.1 LSYS01003057 OPJ84301.1 KL409688 KFQ91175.1 AK077347 BC027559 AFYH01141236 AFYH01141237 AFYH01141238 AK290154 AL627424 BC001082 BC031695 AY532267 AL110240 IACN01097726 LAB60592.1 KQ434918 KZC11461.1 KK686515 KFQ14815.1 AWGT02000144 OXB75517.1 AEMK02000096 DQIR01214890 HDB70367.1 MKHE01000015 OWK07466.1 KK559044 KFW00012.1 AABR03000057 AABR03007566 AABR03011265 AABR03004155 BC078988 KL205881 KFV76030.1 KL669486 KFW76454.1 KK718105 KFO54364.1 AMGL01063673 AJFE02089753 AACZ04051123 GABE01011172 NBAG03000216 JAA33567.1 PNI81950.1 ADFV01163472 ADFV01163473 ADFV01163474 KK929723 KFQ44572.1 KK518081 KFP65441.1 AADN05000306 KK601918 KFW06716.1 CABD030075781 KK759123 KFP44314.1 RJVU01023003 ROL50044.1 KK501486 KFP15331.1 KL508434 KFO85647.1 KZ288227 PBC31848.1 KB630312 KB630792 KB632329 ERL83534.1 ERL83876.1 ERL92546.1 GAMT01009633 GAMS01011075 GAMR01001590 GAMQ01006438 JAB02228.1 JAB12061.1 JAB32342.1 JAB35413.1 APGK01047537 BT126821 KB741084 AEE61783.1 ENN73989.1 KK481234 KFQ60546.1 JH001286 RAZU01000135 EGW09530.1 RLQ70873.1 KL243346 KFV13169.1 KL447725 KFO76600.1 JH880389 ELR61991.1 BC114010 GBKC01001059 GBKD01000669 JAG45011.1 JAG46949.1 JH174169 GEBF01000548 EHB18519.1 JAO03085.1 GEDC01026619 JAS10679.1 AAGW02060827 AAGW02060828 AANG04000273
GDQN01009706 JAT81348.1 GDQN01004328 JAT86726.1 NWSH01004849 PCG64653.1 AK401586 BAM18208.1 RSAL01000006 RVE54224.1 KQ459600 KPI94162.1 AGBW02014956 OWR40822.1 JTDY01001078 KOB74943.1 KQ458546 KPJ05830.1 KQ461195 KPJ06769.1 KQ971312 EEZ97894.1 GEZM01037460 JAV82060.1 GEBQ01024885 JAT15092.1 AK417889 BAN21104.1 LJIG01002386 LJIG01002385 KRT84554.1 KRT84555.1 KK852468 KDR23271.1 GFTR01003315 JAW13111.1 GECL01001142 JAP04982.1 GBGD01003022 JAC85867.1 KL870257 KGL87375.1 QRBI01000108 RMC11464.1 NNAY01000192 OXU30124.1 KL217736 KFO98286.1 GDKW01002464 JAI54131.1 GAHY01000733 JAA76777.1 ABQF01027082 GBHO01000617 GBRD01003625 GDHC01013963 GDHC01011343 JAG42987.1 JAG62196.1 JAQ04666.1 JAQ07286.1 GG666484 EEN64912.1 MUZQ01000028 OWK62369.1 QUSF01000019 RLW02187.1 GBYB01002089 JAG71856.1 NEVH01027057 PNF14127.1 LMAW01002767 KQK77324.1 KL226002 KFM06556.1 LSYS01003057 OPJ84301.1 KL409688 KFQ91175.1 AK077347 BC027559 AFYH01141236 AFYH01141237 AFYH01141238 AK290154 AL627424 BC001082 BC031695 AY532267 AL110240 IACN01097726 LAB60592.1 KQ434918 KZC11461.1 KK686515 KFQ14815.1 AWGT02000144 OXB75517.1 AEMK02000096 DQIR01214890 HDB70367.1 MKHE01000015 OWK07466.1 KK559044 KFW00012.1 AABR03000057 AABR03007566 AABR03011265 AABR03004155 BC078988 KL205881 KFV76030.1 KL669486 KFW76454.1 KK718105 KFO54364.1 AMGL01063673 AJFE02089753 AACZ04051123 GABE01011172 NBAG03000216 JAA33567.1 PNI81950.1 ADFV01163472 ADFV01163473 ADFV01163474 KK929723 KFQ44572.1 KK518081 KFP65441.1 AADN05000306 KK601918 KFW06716.1 CABD030075781 KK759123 KFP44314.1 RJVU01023003 ROL50044.1 KK501486 KFP15331.1 KL508434 KFO85647.1 KZ288227 PBC31848.1 KB630312 KB630792 KB632329 ERL83534.1 ERL83876.1 ERL92546.1 GAMT01009633 GAMS01011075 GAMR01001590 GAMQ01006438 JAB02228.1 JAB12061.1 JAB32342.1 JAB35413.1 APGK01047537 BT126821 KB741084 AEE61783.1 ENN73989.1 KK481234 KFQ60546.1 JH001286 RAZU01000135 EGW09530.1 RLQ70873.1 KL243346 KFV13169.1 KL447725 KFO76600.1 JH880389 ELR61991.1 BC114010 GBKC01001059 GBKD01000669 JAG45011.1 JAG46949.1 JH174169 GEBF01000548 EHB18519.1 JAO03085.1 GEDC01026619 JAS10679.1 AAGW02060827 AAGW02060828 AANG04000273
Proteomes
UP000005204
UP000218220
UP000283053
UP000053268
UP000007151
UP000037510
+ More
UP000053240 UP000007266 UP000027135 UP000002358 UP000053858 UP000001645 UP000269221 UP000192223 UP000215335 UP000054308 UP000007754 UP000001554 UP000197619 UP000276834 UP000235965 UP000018467 UP000051836 UP000053286 UP000190648 UP000053283 UP000000589 UP000007646 UP000008672 UP000005640 UP000076502 UP000198419 UP000008227 UP000002494 UP000053584 UP000053258 UP000233160 UP000245340 UP000052976 UP000002356 UP000240080 UP000002277 UP000001073 UP000000539 UP000001519 UP000053119 UP000286642 UP000242457 UP000005203 UP000248481 UP000030742 UP000008225 UP000252040 UP000019118 UP000248484 UP000248483 UP000001075 UP000273346 UP000053760 UP000248480 UP000009136 UP000006813 UP000001811 UP000265300 UP000011712 UP000189706 UP000233040
UP000053240 UP000007266 UP000027135 UP000002358 UP000053858 UP000001645 UP000269221 UP000192223 UP000215335 UP000054308 UP000007754 UP000001554 UP000197619 UP000276834 UP000235965 UP000018467 UP000051836 UP000053286 UP000190648 UP000053283 UP000000589 UP000007646 UP000008672 UP000005640 UP000076502 UP000198419 UP000008227 UP000002494 UP000053584 UP000053258 UP000233160 UP000245340 UP000052976 UP000002356 UP000240080 UP000002277 UP000001073 UP000000539 UP000001519 UP000053119 UP000286642 UP000242457 UP000005203 UP000248481 UP000030742 UP000008225 UP000252040 UP000019118 UP000248484 UP000248483 UP000001075 UP000273346 UP000053760 UP000248480 UP000009136 UP000006813 UP000001811 UP000265300 UP000011712 UP000189706 UP000233040
Pfam
PF14913 DPCD
Interpro
IPR026224
DPCD
ProteinModelPortal
H9JPW1
A0A2H1V7T8
A0A1E1W0S9
A0A1E1W2Z5
A0A1E1WIJ8
A0A2A4IZW6
+ More
I4DJW8 A0A3S2P0Y5 A0A194PLF8 A0A212EH69 A0A0L7LH97 A0A0N1PEN7 A0A194QN35 D6WBE5 A0A1Y1MBW2 A0A1B6KUG0 R4WDV6 A0A0T6BB27 A0A067RHD8 A0A224XYJ7 A0A0V0GAJ1 K7IML9 A0A069DQJ5 A0A0A0A2Y2 G1NCK4 A0A3M0KJS4 A0A1W4WHB9 A0A232FHB3 A0A091HQW3 A0A0P4VT47 R4FN24 H0ZI66 A0A0A9ZCI3 C3Y3N6 A0A218V8T1 A0A3L8SHJ9 A0A0C9QFB2 A0A2J7PCT4 W5LHP7 A0A0Q3PMM9 A0A087QZA2 A0A1V4KIT1 A0A091UMP9 Q8BPA8 G3T3T2 H2ZYN3 Q9BVM2 A0A2D4PRF7 A0A154PHX2 A0A091Q4H8 A0A226P7V0 F1S8U0 A0A212CN44 A0A384AJH2 A0A093IK65 Q6AYM4 A0A093H9E1 A0A093S0D4 A0A2K6FEL8 A0A2U3W211 A0A091ED41 W5Q581 A0A2R9BL51 H2Q2G3 G1RXX7 A0A091SNG9 A0A091M1W8 E1C3U1 A0A093LC36 G3QQQ9 A0A091KUL1 A0A3N0YV08 A0A091JUS5 A0A091GT07 A0A3Q7VC29 A0A2A3EJG9 A0A087ZU18 A0A2Y9HWB9 U4TZY5 F7HH78 A0A341ANU5 J3JUA8 A0A2Y9F2H6 A0A091TPG0 A0A2Y9N654 G3I578 A0A093CJL3 A0A091G239 A0A2Y9RNM8 L8IZW8 Q24K21 A0A0B8RPB4 G5CAF8 A0A1B6CBF2 G1T9A6 A0A340YBH6 A0A2I2V3U0 A0A1U7Q5T2 A0A2K5RER0
I4DJW8 A0A3S2P0Y5 A0A194PLF8 A0A212EH69 A0A0L7LH97 A0A0N1PEN7 A0A194QN35 D6WBE5 A0A1Y1MBW2 A0A1B6KUG0 R4WDV6 A0A0T6BB27 A0A067RHD8 A0A224XYJ7 A0A0V0GAJ1 K7IML9 A0A069DQJ5 A0A0A0A2Y2 G1NCK4 A0A3M0KJS4 A0A1W4WHB9 A0A232FHB3 A0A091HQW3 A0A0P4VT47 R4FN24 H0ZI66 A0A0A9ZCI3 C3Y3N6 A0A218V8T1 A0A3L8SHJ9 A0A0C9QFB2 A0A2J7PCT4 W5LHP7 A0A0Q3PMM9 A0A087QZA2 A0A1V4KIT1 A0A091UMP9 Q8BPA8 G3T3T2 H2ZYN3 Q9BVM2 A0A2D4PRF7 A0A154PHX2 A0A091Q4H8 A0A226P7V0 F1S8U0 A0A212CN44 A0A384AJH2 A0A093IK65 Q6AYM4 A0A093H9E1 A0A093S0D4 A0A2K6FEL8 A0A2U3W211 A0A091ED41 W5Q581 A0A2R9BL51 H2Q2G3 G1RXX7 A0A091SNG9 A0A091M1W8 E1C3U1 A0A093LC36 G3QQQ9 A0A091KUL1 A0A3N0YV08 A0A091JUS5 A0A091GT07 A0A3Q7VC29 A0A2A3EJG9 A0A087ZU18 A0A2Y9HWB9 U4TZY5 F7HH78 A0A341ANU5 J3JUA8 A0A2Y9F2H6 A0A091TPG0 A0A2Y9N654 G3I578 A0A093CJL3 A0A091G239 A0A2Y9RNM8 L8IZW8 Q24K21 A0A0B8RPB4 G5CAF8 A0A1B6CBF2 G1T9A6 A0A340YBH6 A0A2I2V3U0 A0A1U7Q5T2 A0A2K5RER0
Ontologies
GO
PANTHER
Topology
Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00023
Exp number, first 60 AAs:
0
Total prob of N-in:
0.39275
outside
1 - 204
Population Genetic Test Statistics
Pi
277.588112
Theta
202.772097
Tajima's D
1.135943
CLR
0
CSRT
0.690615469226539
Interpretation
Uncertain
