Silkworm Genome Informatics Database

Gene

KWMTBOMO13842

Annotation

protein_tyrosine_phosphatase_[Bombyx_mori]

Location

Bomo_Chr23(-):11012052-11013429 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.969

CDS

ATGCCTAAACTTCCCGATAGATGGATAAAATACAATGCTTGCGGACGGGTAATAGAAGGCACAAGAATTATCTGTTTTAAAGTACCTCTATCAAAGAGAAATTGCGAACAGCGCCATCTAGGCTTTGTTCAATTACATTACTATTTAAGGAAGGTGGGTTTACTCACGTCGCTAACAGATGTCGCTGTACGATGTGTTATGGCGGCTTAA

Protein

MPKLPDRWIKYNACGRVIEGTRIICFKVPLSKRNCEQRHLGFVQLHYYLRKVGLLTSLTDVAVRCVMAA

Uniprot

A0A194QMK9 R4IT82 A0A3B4CFU7 A0A034VZG7 A0A1A9ZP31 A0A0K8VGG3 + More
A0A1A9YFL9 A0A0K8W140 A0A1I8MX75 W8B597 W8BH65 B4N5Q9 A0A1B0BAL7 A0A0B4UL94 A0A3Q3GMA6 B4JVR6 A0A3B0J5L2 A0A2D0SS09 W5UCX4 A0A1B6M7T4 A0A1B6M954

Pubmed

26354079 25348373 25315136 24495485 17994087 19651137 + More
23127152

EMBL

KQ461195 KPJ06768.1 JQ744278 AGC39044.1 GAKP01011989 JAC46963.1 + More
GDHF01014343 JAI37971.1 GDHF01007744 JAI44570.1 GAMC01010225 JAB96330.1 GAMC01010227 JAB96328.1 CH964154 EDW79698.2 JXJN01011052 KJ631623 AJD09297.1 CH916375 EDV98054.1 OUUW01000001 SPP74962.1 JT412469 AHH39861.1 GEBQ01007999 JAT31978.1 GEBQ01007511 JAT32466.1

Proteomes

UP000053240 UP000261440 UP000092445 UP000092443 UP000095301 UP000007798 + More
UP000092460 UP000202427 UP000261660 UP000001070 UP000268350 UP000221080

Pfam

PF00782 DSPc

Interpro

IPR029021   Prot-tyrosine_phosphatase-like        + More
IPR000340   Dual-sp_phosphatase_cat-dom
IPR000387   TYR_PHOSPHATASE_dom
IPR020422   TYR_PHOSPHATASE_DUAL_dom
IPR016130   Tyr_Pase_AS
IPR003595   Tyr_Pase_cat

SUPFAM

SSF52799 SSF52799

Gene 3D

3.90.190.10

ProteinModelPortal

A0A194QMK9 R4IT82 A0A3B4CFU7 A0A034VZG7 A0A1A9ZP31 A0A0K8VGG3 + More
A0A1A9YFL9 A0A0K8W140 A0A1I8MX75 W8B597 W8BH65 B4N5Q9 A0A1B0BAL7 A0A0B4UL94 A0A3Q3GMA6 B4JVR6 A0A3B0J5L2 A0A2D0SS09 W5UCX4 A0A1B6M7T4 A0A1B6M954

PDB

1YN9 E-value=0.00741442, Score=86

KEGG

692515 K14165 atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48] | (RefSeq) Ptp-h, Bmptp-h; prote

GO

GO:0008138 GO:0004725 GO:0016787

Length:

69

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06255

Exp number, first 60 AAs:

0.04577

Total prob of N-in:

0.35543

outside

1 - 69

Pi

258.409324

Theta

207.218956

Tajima's D

0.739577

CLR

0

CSRT

0.585370731463427

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics