Gene

KWMTBOMO13838

Pre Gene Modal

BGIBMGA011452

Annotation

PREDICTED:_uncharacterized_protein_LOC105842494_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr23(-):10770246-10809555      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.456

CDS

ATGTATCTCTGTTTCAATCGATCCCGGCTTGTCGGCAGGCGCCTGACACGTTTCCAAGCAGAGAAGCAGCCCAACTGCCTATTCAAAGAGGAATTTGTCGACGGCTACAACAGATACCGACTCGCGAACAACAAAAACAGGTACATAGGGTTCAACCGGCGCGGGATGCAGTTGCGTCGTGGCAAGAACAACGTTCCGGAGAGAATGCACAAGTGTTTCTCCTTCATGAACGAAGCCCACGACTTCGACATCAACAGACACAACAGCATGCTCGCCAATACCAAGTGGCGCTCACAGCGTAGACGGCCTCCAGCGCAGAACTCCATCAAGCCTCCGTGCCGCGGTGTGCGCCACCACCACGCCAGGCATCAGAGGCGGAGGAACTGCGAGGGCACGTAG

Protein

MYLCFNRSRLVGRRLTRFQAEKQPNCLFKEEFVDGYNRYRLANNKNRYIGFNRRGMQLRRGKNNVPERMHKCFSFMNEAHDFDINRHNSMLANTKWRSQRRRPPAQNSIKPPCRGVRHHHARHQRRRNCEGT

Similarity

Belongs to the heparin-binding growth factors family.

Uniprot

H9JPJ7   A0A212EH60   A0A2A4JJ65   A0A0L7L6E5   A0A2H1VPN8   A0A194PMF2   + More
A0A1E1VZ95   A0A194QT96   A0A2H8TVL4   A0A2P8Z2F9   A0A2S2PT82   J9KRX7   E2BRB7   A0A151IQM2   A0A195BS72   A0A151IYJ8   A0A158NCE5   E2AB76   A0A1B6LT34   A0A1B6JT71   A0A195FGC4   A0A1B6BZU2   A0A2R7VX88   A0A087ZU22   E0VYA6  

Pubmed

19121390    22118469    26227816    26354079    29403074    20798317    + More
21347285    20566863   

EMBL

BABH01015426    AGBW02014956    OWR40825.1    NWSH01001386    PCG71450.1    JTDY01002707    + More
KOB70879.1    ODYU01003704    SOQ42805.1    KQ459600    KPI94168.1    GDQN01011050    JAT80004.1    KQ461195    KPJ06766.1    GFXV01006155    MBW17960.1    PYGN01000227    PSN50679.1    GGMR01020040    MBY32659.1    ABLF02036741    GL449942    EFN81752.1    KQ976779    KYN08410.1    KQ976423    KYM88852.1    KQ980774    KYN13254.1    ADTU01000620    ADTU01000621    ADTU01000622    GL438234    EFN69352.1    GEBQ01013135    JAT26842.1    GECU01031941    GECU01005330    JAS75765.1    JAT02377.1    KQ981606    KYN39453.1    GEDC01030511    GEDC01019468    JAS06787.1    JAS17830.1    KK854145    PTY12124.1    DS235845    EEB18362.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000037510    UP000053268    UP000053240    + More
UP000245037    UP000007819    UP000008237    UP000078542    UP000078540    UP000078492    UP000005205    UP000000311    UP000078541    UP000005203    UP000009046   

PRIDE

H9JPJ7   

Pfam

PF00167   FGF

Interpro

IPR002209   Fibroblast_GF_fam        + More
IPR008996   IL1/FGF       
IPR028287   FGF17       

SUPFAM

SSF50353   SSF50353       

ProteinModelPortal

H9JPJ7   A0A212EH60   A0A2A4JJ65   A0A0L7L6E5   A0A2H1VPN8   A0A194PMF2   + More
A0A1E1VZ95   A0A194QT96   A0A2H8TVL4   A0A2P8Z2F9   A0A2S2PT82   J9KRX7   E2BRB7   A0A151IQM2   A0A195BS72   A0A151IYJ8   A0A158NCE5   E2AB76   A0A1B6LT34   A0A1B6JT71   A0A195FGC4   A0A1B6BZU2   A0A2R7VX88   A0A087ZU22   E0VYA6  

KEGG

105842494    K04358 fibroblast growth factor | (RefSeq) uncharacterized LOC105842494

GO

GO:0008083   GO:0016021   GO:0005515   GO:0006468   GO:0016075   GO:0003677   GO:0005524   GO:0016787   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR11486   PTHR11486:SF71  

Length:

132

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.23994

outside

1  -  132

 

 

Pi

263.830846

Theta

190.331516

Tajima's D

0.590141

CLR

0.281048

CSRT

0.544822758862057

Interpretation

Uncertain