Silkworm Genome Informatics Database

Gene

KWMTBOMO13836

Annotation

Suppressor_of_tumorigenicity_14_protein-like_[Papilio_xuthus]

Location

Bomo_Chr23(-):10520363-10521605 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.846 PlasmaMembrane Reliability : 1.322

CDS

ATGTTTAAATTACTAAGTAAATTAAGCATTTTATTATCATTTATACAGTTGTGTGTTTCTATGAATAGTTTTTTGTATTTTAATAAGAGCGAGTTCGTGCAGAGGGTGTCTAATGGTAGAGCAGCCAAACTCGGAGATGTACCGTATCAGGTTGCTTTTAAAGCTTTGTATTCAAGAATTCGTAATTTGTACGTCACCTTCTGCGGTGGTGTGATAATAGGGCCTGCGAAGCTGATCTCTGCTGCACATTGCTTTGAAGAAAAAAATTCTTACTGTCGGAAGTTTTGGAGTAAGAGGTAA

Protein

MFKLLSKLSILLSFIQLCVSMNSFLYFNKSEFVQRVSNGRAAKLGDVPYQVAFKALYSRIRNLYVTFCGGVIIGPAKLISAAHCFEEKNSYCRKFWSKR

Similarity

Belongs to the peptidase S1 family.

Uniprot

A0A2H1WYD5 A0A182MQL7 A0A2H1VJG9 A0A2A4J0W0 A0A2I0SA51 A0A2C9JHE4 + More
A0A1L8FLJ9

Pubmed

29242781 15562597 27762356

EMBL

ODYU01011996 SOQ58058.1 AXCM01009256 ODYU01002900 SOQ40968.1 NWSH01004094 + More
PCG65499.1 MVDW01000001 PKS04666.1 CM004478 OCT72464.1

Proteomes

UP000075883 UP000218220 UP000234720 UP000076420 UP000186698

Pfam

PF00089 Trypsin + More
PF15494 SRCR_2

Interpro

IPR001254   Trypsin_dom        + More
IPR018114   TRYPSIN_HIS
IPR009003   Peptidase_S1_PA
IPR001314   Peptidase_S1A
IPR033116   TRYPSIN_SER
IPR017448   SRCR-like_dom
IPR036055   LDL_receptor-like_sf
IPR036772   SRCR-like_dom_sf
IPR001190   SRCR

SUPFAM

SSF50494   SSF50494        + More
SSF57424   SSF57424
SSF56487   SSF56487

CDD

cd00190 Tryp_SPc

ProteinModelPortal

A0A2H1WYD5 A0A182MQL7 A0A2H1VJG9 A0A2A4J0W0 A0A2I0SA51 A0A2C9JHE4 + More
A0A1L8FLJ9

PDB

2XRC E-value=2.61871e-05, Score=107

KEGG

101736551 no KO assigned | (RefSeq) trypsin-3-like

GO

GO:0004252 GO:0016021 GO:0005044 GO:0006508 GO:0006468 GO:0016075 GO:0003677 GO:0005524 GO:0016787 GO:0004713 GO:0016491 GO:0015930

SignalP

Position: 1 - 20, Likelihood: 0.750829

Length:

99

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

36.72583

Exp number, first 60 AAs:

17.16971

Total prob of N-in:

0.29721

POSSIBLE N-term signal

sequence

outside

1 - 9

TMhelix

10 - 27

inside

28 - 62

TMhelix

63 - 85

outside

86 - 99

Pi

237.616739

Theta

168.039503

Tajima's D

1.20225

CLR

27.478718

CSRT

0.71656417179141

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics